RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 LSM5Q9Y4Y9 91 aaKnown RBP5.79□□□□□ -1.48
RIF1-211ENST00000494333 DYNC2H1Q8NCM8 4307 aaKnown RBP5.78□□□□□ -1.48
RIF1-211ENST00000494333 TRAV8-2A0A0B4J237 113 aa5.78□□□□□ -1.48
RIF1-211ENST00000494333 FAM240BA0A1B0GVZ2 78 aa5.78□□□□□ -1.48
RIF1-211ENST00000494333 SMIM9A6NGZ8 99 aa5.78□□□□□ -1.48
RIF1-211ENST00000494333 CBY3A6NI87 242 aa5.78□□□□□ -1.48
RIF1-211ENST00000494333 ZNF705FA8MVS1 300 aaPredicted RBP5.78□□□□□ -1.48
RIF1-211ENST00000494333 ZNF705DP0CH99 300 aaPredicted RBP5.78□□□□□ -1.48
RIF1-211ENST00000494333 ZNF705BP0CI00 300 aaPredicted RBP5.78□□□□□ -1.48
RIF1-211ENST00000494333 RPL7P18124 248 aaKnown RBP5.78□□□□□ -1.48
RIF1-211ENST00000494333 BCAP31P51572 246 aa5.78□□□□□ -1.48
RIF1-211ENST00000494333 CAV2P51636 162 aa5.78□□□□□ -1.48
RIF1-211ENST00000494333 SLC38A11Q08AI6 406 aa5.78□□□□□ -1.48
RIF1-211ENST00000494333 C12orf74Q32Q52 190 aa5.78□□□□□ -1.48
RIF1-211ENST00000494333 PATE2Q6UY27 113 aa5.78□□□□□ -1.48
RIF1-211ENST00000494333 S100A7AQ86SG5 101 aa5.78□□□□□ -1.48
RIF1-211ENST00000494333 C12orf45Q8N5I9 185 aaPredicted RBP5.78□□□□□ -1.48
RIF1-211ENST00000494333 PRR26Q8N8Z3 221 aa5.78□□□□□ -1.48
RIF1-211ENST00000494333 LRRC20Q8TCA0 184 aa5.78□□□□□ -1.48
RIF1-211ENST00000494333 GGACTQ9BVM4 153 aa5.78□□□□□ -1.48
RIF1-211ENST00000494333 ARV1Q9H2C2 271 aa5.78□□□□□ -1.48
RIF1-211ENST00000494333 IGHV4-4A0A075B6R2 117 aa5.77□□□□□ -1.49
RIF1-211ENST00000494333 DEFB131BA0A096LNP1 70 aa5.77□□□□□ -1.49
RIF1-211ENST00000494333 TMEM189A5PLL7 270 aa5.77□□□□□ -1.49
RIF1-211ENST00000494333 FAM24AA6NFZ4 105 aa5.77□□□□□ -1.49
RIF1-211ENST00000494333 K7EPK0 472 aa5.77□□□□□ -1.49
RIF1-211ENST00000494333 AGPAT2O15120 278 aa5.77□□□□□ -1.49
RIF1-211ENST00000494333 HBE1P02100 147 aa5.77□□□□□ -1.49
RIF1-211ENST00000494333 SPART-AS1P0CW21 52 aa5.77□□□□□ -1.49
RIF1-211ENST00000494333 PVALBP20472 110 aaPredicted RBP5.77□□□□□ -1.49
RIF1-211ENST00000494333 CNN1P51911 297 aaKnown RBP5.77□□□□□ -1.49
RIF1-211ENST00000494333 MZT2BQ6NZ67 158 aa5.77□□□□□ -1.49
RIF1-211ENST00000494333 AMTNQ6UX39 209 aa5.77□□□□□ -1.49
RIF1-211ENST00000494333 LINC00299Q6ZSB3 139 aa5.77□□□□□ -1.49
RIF1-211ENST00000494333 C1orf158Q8N1D5 194 aa5.77□□□□□ -1.49
RIF1-211ENST00000494333 RNF182Q8N6D2 247 aa5.77□□□□□ -1.49
RIF1-211ENST00000494333 S100ZQ8WXG8 99 aa5.77□□□□□ -1.49
RIF1-211ENST00000494333 C2orf50Q96LR7 162 aa5.77□□□□□ -1.49
RIF1-211ENST00000494333 GOLT1BQ9Y3E0 138 aa5.77□□□□□ -1.49
RIF1-211ENST00000494333 RFNGQ9Y644 331 aa5.77□□□□□ -1.49
RIF1-211ENST00000494333 SACSQ9NZJ4 4579 aa5.76□□□□□ -1.49
RIF1-211ENST00000494333 GAGE10A6NGK3 116 aa5.76□□□□□ -1.49
RIF1-211ENST00000494333 CST7O76096 145 aa5.76□□□□□ -1.49
RIF1-211ENST00000494333 DUSP14O95147 198 aaKnown RBP5.76□□□□□ -1.49
RIF1-211ENST00000494333 SNRPCP09234 159 aaKnown RBP5.76□□□□□ -1.49
RIF1-211ENST00000494333 PRB4P10163 310 aaPredicted RBP5.76□□□□□ -1.49
RIF1-211ENST00000494333 CXCL3P19876 107 aa5.76□□□□□ -1.49
RIF1-211ENST00000494333 CAMLGP49069 296 aa5.76□□□□□ -1.49
RIF1-211ENST00000494333 S100A10P60903 97 aa5.76□□□□□ -1.49
RIF1-211ENST00000494333 RAB31Q13636 194 aa5.76□□□□□ -1.49
RIF1-211ENST00000494333 SPINK13Q1W4C9 94 aa5.76□□□□□ -1.49
RIF1-211ENST00000494333 LINC00305Q7Z4B0 112 aa5.76□□□□□ -1.49
RIF1-211ENST00000494333 ZNF546Q86UE3 836 aa5.76□□□□□ -1.49
RIF1-211ENST00000494333 ZNF738Q8NE65 137 aa5.76□□□□□ -1.49
RIF1-211ENST00000494333 IGF2BP2-AS1Q96M15 143 aa5.76□□□□□ -1.49
RIF1-211ENST00000494333 MGST2Q99735 147 aa5.76□□□□□ -1.49
RIF1-211ENST00000494333 TMEM208Q9BTX3 173 aa5.76□□□□□ -1.49
RIF1-211ENST00000494333 RNF24Q9Y225 148 aa5.76□□□□□ -1.49
RIF1-211ENST00000494333 A0A087X0K7 114 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 A8MTW9 85 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 M0R2Z0 102 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 MRPS12O15235 138 aaKnown RBP5.75□□□□□ -1.49
RIF1-211ENST00000494333 COX7A2P2O60397 106 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 RHOBP62745 196 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 HIST1H1AQ02539 215 aaPredicted RBP5.75□□□□□ -1.49
RIF1-211ENST00000494333 IL15RAQ13261 267 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 ASAH1Q13510 395 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 PSG3Q16557 428 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 RRN3P1Q2M238 152 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 SERTAD4-AS1Q5TG53 156 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 FAM222AQ5U5X8 452 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 C10orf113Q5VZT2 155 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 MIC13Q5XKP0 118 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 Q6ZRG5 221 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 NRARPQ7Z6K4 114 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 BPIFA4PQ86YQ2 179 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 TMEM252Q8N6L7 170 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 OR11H7Q8NGC8 314 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 TMEM37Q8WXS4 190 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 RNF126Q9BV68 326 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 C11orf1Q9H5F2 150 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 DNAJC4Q9NNZ3 241 aa5.75□□□□□ -1.49
RIF1-211ENST00000494333 YTHDF2Q9Y5A9 579 aaKnown RBP5.75□□□□□ -1.49
RIF1-211ENST00000494333 HYDINQ4G0P3 5121 aa5.74□□□□□ -1.49
RIF1-211ENST00000494333 TRAV12-2A0A075B6T6 113 aa5.74□□□□□ -1.49
RIF1-211ENST00000494333 H3BTX0 84 aa5.74□□□□□ -1.49
RIF1-211ENST00000494333 CRXO43186 299 aaPredicted RBP5.74□□□□□ -1.49
RIF1-211ENST00000494333 AMBPP02760 352 aa5.74□□□□□ -1.49
RIF1-211ENST00000494333 PRM2P04554 102 aa5.74□□□□□ -1.49
RIF1-211ENST00000494333 S100A11P31949 105 aa5.74□□□□□ -1.49
RIF1-211ENST00000494333 SULT1A1P50225 295 aa5.74□□□□□ -1.49
RIF1-211ENST00000494333 OR8A1Q8NGG7 326 aa5.74□□□□□ -1.49
RIF1-211ENST00000494333 ENKURQ8TC29 256 aa5.74□□□□□ -1.49
RIF1-211ENST00000494333 RPUSD4Q96CM3 377 aaKnown RBP5.74□□□□□ -1.49
RIF1-211ENST00000494333 NIPSNAP3BQ9BS92 247 aa5.74□□□□□ -1.49
RIF1-211ENST00000494333 NDUFAF3Q9BU61 184 aa5.74□□□□□ -1.49
RIF1-211ENST00000494333 GPN1Q9HCN4 374 aaPredicted RBP5.74□□□□□ -1.49
RIF1-211ENST00000494333 ZNF331Q9NQX6 463 aaPredicted RBP5.74□□□□□ -1.49
RIF1-211ENST00000494333 LYRM2Q9NU23 88 aaPredicted RBP5.74□□□□□ -1.49
RIF1-211ENST00000494333 UQCC1Q9NVA1 299 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms