RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 OR2K2Q8NGT1 345 aa16.55■□□□□ 0.24
PSPC1-204ENST00000492741 SPAG8Q99932 426 aaPredicted RBP16.55■□□□□ 0.24
PSPC1-204ENST00000492741 SLC35B3Q9H1N7 401 aa16.55■□□□□ 0.24
PSPC1-204ENST00000492741 PRELID1Q9Y255 219 aa16.55■□□□□ 0.24
PSPC1-204ENST00000492741 SRP19P09132 144 aaKnown RBP16.54■□□□□ 0.24
PSPC1-204ENST00000492741 PRB4P10163 310 aaPredicted RBP16.54■□□□□ 0.24
PSPC1-204ENST00000492741 PSG3Q16557 428 aa16.54■□□□□ 0.24
PSPC1-204ENST00000492741 OR4C46A6NHA9 309 aa16.53■□□□□ 0.24
PSPC1-204ENST00000492741 ZNF705FA8MVS1 300 aaPredicted RBP16.53■□□□□ 0.24
PSPC1-204ENST00000492741 ZNF688P0C7X2 276 aa16.53■□□□□ 0.24
PSPC1-204ENST00000492741 ZNF738Q8NE65 137 aa16.53■□□□□ 0.24
PSPC1-204ENST00000492741 TCEAL7Q9BRU2 100 aa16.53■□□□□ 0.24
PSPC1-204ENST00000492741 STAB1Q9NY15 2570 aa16.53■□□□□ 0.24
PSPC1-204ENST00000492741 TRAV2A0A0B4J234 112 aa16.53■□□□□ 0.24
PSPC1-204ENST00000492741 IGLL1P15814 213 aa16.53■□□□□ 0.24
PSPC1-204ENST00000492741 CYB561D1Q8N8Q1 229 aa16.53■□□□□ 0.24
PSPC1-204ENST00000492741 HIST1H2BAQ96A08 127 aa16.53■□□□□ 0.24
PSPC1-204ENST00000492741 C20orf173Q96LM9 149 aa16.53■□□□□ 0.24
PSPC1-204ENST00000492741 TMEM250H0YL14 139 aa16.52■□□□□ 0.24
PSPC1-204ENST00000492741 PEX7O00628 323 aa16.52■□□□□ 0.24
PSPC1-204ENST00000492741 FAM24BQ8N5W8 94 aa16.52■□□□□ 0.24
PSPC1-204ENST00000492741 TCRAP04437 139 aa16.51■□□□□ 0.23
PSPC1-204ENST00000492741 SFTA3P0C7M3 94 aa16.51■□□□□ 0.23
PSPC1-204ENST00000492741 PSMG4Q5JS54 123 aa16.51■□□□□ 0.23
PSPC1-204ENST00000492741 GOLT1AQ6ZVE7 132 aa16.51■□□□□ 0.23
PSPC1-204ENST00000492741 RPUSD4Q96CM3 377 aaKnown RBP16.51■□□□□ 0.23
PSPC1-204ENST00000492741 ATG101Q9BSB4 218 aa16.51■□□□□ 0.23
PSPC1-204ENST00000492741 DIRC3C9JPN6 131 aa16.5■□□□□ 0.23
PSPC1-204ENST00000492741 K7EQM0 130 aa16.5■□□□□ 0.23
PSPC1-204ENST00000492741 ZNF674Q2M3X9 581 aa16.5■□□□□ 0.23
PSPC1-204ENST00000492741 MRPL53Q96EL3 112 aaKnown RBP16.5■□□□□ 0.23
PSPC1-204ENST00000492741 NDUFS6O75380 124 aaKnown RBP16.5■□□□□ 0.23
PSPC1-204ENST00000492741 AKR1C3P42330 323 aa16.5■□□□□ 0.23
PSPC1-204ENST00000492741 CNN1P51911 297 aaKnown RBP16.49■□□□□ 0.23
PSPC1-204ENST00000492741 SOHLH1Q5JUK2 328 aa16.49■□□□□ 0.23
PSPC1-204ENST00000492741 PRR31Q5SQ13 230 aa16.49■□□□□ 0.23
PSPC1-204ENST00000492741 C11orf52Q96A22 123 aa16.49■□□□□ 0.23
PSPC1-204ENST00000492741 ZNF256Q9Y2P7 627 aaPredicted RBP16.49■□□□□ 0.23
PSPC1-204ENST00000492741 TMEM218A2RU14 115 aa16.48■□□□□ 0.23
PSPC1-204ENST00000492741 ARL6IP6Q8N6S5 226 aa16.48■□□□□ 0.23
PSPC1-204ENST00000492741 LINC00479Q96M42 142 aa16.48■□□□□ 0.23
PSPC1-204ENST00000492741 IGKV2-40A0A087WW87 121 aaPredicted RBP16.48■□□□□ 0.23
PSPC1-204ENST00000492741 IGKV2D-40P01614 121 aaPredicted RBP16.48■□□□□ 0.23
PSPC1-204ENST00000492741 UBE2G1P62253 170 aa16.48■□□□□ 0.23
PSPC1-204ENST00000492741 SGK494Q96LW2 274 aa16.48■□□□□ 0.23
PSPC1-204ENST00000492741 DERL1Q9BUN8 251 aa16.48■□□□□ 0.23
PSPC1-204ENST00000492741 PARLQ9H300 379 aa16.48■□□□□ 0.23
PSPC1-204ENST00000492741 VWFP04275 2813 aa16.47■□□□□ 0.23
PSPC1-204ENST00000492741 TRAV34A0A0B4J273 112 aa16.47■□□□□ 0.23
PSPC1-204ENST00000492741 PRAC2D3DTV9 90 aa16.47■□□□□ 0.23
PSPC1-204ENST00000492741 DEFB131AP59861 70 aa16.47■□□□□ 0.23
PSPC1-204ENST00000492741 C2CD4CQ8TF44 421 aa16.47■□□□□ 0.23
PSPC1-204ENST00000492741 GPR61Q9BZJ8 451 aa16.47■□□□□ 0.23
PSPC1-204ENST00000492741 TRRAPQ9Y4A5 3859 aa16.46■□□□□ 0.23
PSPC1-204ENST00000492741 SERTM2A0A1B0GWG4 89 aa16.46■□□□□ 0.23
PSPC1-204ENST00000492741 F8W036 122 aa16.46■□□□□ 0.23
PSPC1-204ENST00000492741 RPL35P42766 123 aaKnown RBP16.46■□□□□ 0.23
PSPC1-204ENST00000492741 ZNF727A8MUV8 499 aa16.45■□□□□ 0.22
PSPC1-204ENST00000492741 DEFB1P60022 68 aa16.45■□□□□ 0.22
PSPC1-204ENST00000492741 OR10J6PQ8NGY7 276 aa16.45■□□□□ 0.22
PSPC1-204ENST00000492741 SMIM7Q9BQ49 75 aa16.45■□□□□ 0.22
PSPC1-204ENST00000492741 TRAV8-1A0A0A6YYK1 113 aa16.45■□□□□ 0.22
PSPC1-204ENST00000492741 ZNF705DP0CH99 300 aaPredicted RBP16.45■□□□□ 0.22
PSPC1-204ENST00000492741 ZNF705BP0CI00 300 aaPredicted RBP16.45■□□□□ 0.22
PSPC1-204ENST00000492741 F6UB75 175 aa16.44■□□□□ 0.22
PSPC1-204ENST00000492741 EBLN2Q6P2I7 272 aa16.44■□□□□ 0.22
PSPC1-204ENST00000492741 FMC1Q96HJ9 113 aa16.44■□□□□ 0.22
PSPC1-204ENST00000492741 MAP6D1Q9H9H5 199 aa16.44■□□□□ 0.22
PSPC1-204ENST00000492741 S100A9P06702 114 aaKnown RBP16.43■□□□□ 0.22
PSPC1-204ENST00000492741 CMC4P56277 68 aaPredicted RBP16.43■□□□□ 0.22
PSPC1-204ENST00000492741 HIST1H1AQ02539 215 aaPredicted RBP16.43■□□□□ 0.22
PSPC1-204ENST00000492741 ERCC8Q13216 396 aa16.43■□□□□ 0.22
PSPC1-204ENST00000492741 TMEM183BQ1AE95 376 aa16.43■□□□□ 0.22
PSPC1-204ENST00000492741 OXLD1Q5BKU9 147 aa16.43■□□□□ 0.22
PSPC1-204ENST00000492741 TMEM75Q8N9X5 138 aa16.43■□□□□ 0.22
PSPC1-204ENST00000492741 OR8A1Q8NGG7 326 aa16.43■□□□□ 0.22
PSPC1-204ENST00000492741 VGLL1Q99990 258 aa16.43■□□□□ 0.22
PSPC1-204ENST00000492741 RBAKDNA6NC62 111 aa16.42■□□□□ 0.22
PSPC1-204ENST00000492741 OR11H12B2RN74 326 aa16.42■□□□□ 0.22
PSPC1-204ENST00000492741 BEAN1Q3B7T3 259 aa16.42■□□□□ 0.22
PSPC1-204ENST00000492741 FAM74A3Q4VXF1 159 aa16.42■□□□□ 0.22
PSPC1-204ENST00000492741 TMEM78Q5T7P6 136 aa16.42■□□□□ 0.22
PSPC1-204ENST00000492741 PRNTQ86SH4 94 aa16.42■□□□□ 0.22
PSPC1-204ENST00000492741 KRBOX1C9JBD0 128 aa16.42■□□□□ 0.22
PSPC1-204ENST00000492741 TAS2R60P59551 318 aa16.42■□□□□ 0.22
PSPC1-204ENST00000492741 FLI1Q01543 452 aaPredicted RBP16.42■□□□□ 0.22
PSPC1-204ENST00000492741 KLF12Q9Y4X4 402 aa16.42■□□□□ 0.22
PSPC1-204ENST00000492741 CD7P09564 240 aa16.41■□□□□ 0.22
PSPC1-204ENST00000492741 GNG4P50150 75 aa16.41■□□□□ 0.22
PSPC1-204ENST00000492741 GTSCR1Q86UQ5 136 aa16.41■□□□□ 0.22
PSPC1-204ENST00000492741 APRG1Q8IVJ8 170 aa16.41■□□□□ 0.22
PSPC1-204ENST00000492741 NIPSNAP3BQ9BS92 247 aa16.41■□□□□ 0.22
PSPC1-204ENST00000492741 SEC11CQ9BY50 192 aa16.41■□□□□ 0.22
PSPC1-204ENST00000492741 PSG8Q9UQ74 426 aa16.41■□□□□ 0.22
PSPC1-204ENST00000492741 WIPF1O43516 503 aa16.4■□□□□ 0.22
PSPC1-204ENST00000492741 ADCYAP1P18509 176 aa16.4■□□□□ 0.22
PSPC1-204ENST00000492741 ODF3L2Q3SX64 289 aa16.4■□□□□ 0.22
PSPC1-204ENST00000492741 FOXI2Q6ZQN5 318 aa16.4■□□□□ 0.22
PSPC1-204ENST00000492741 KNCNA6PVL3 124 aa16.39■□□□□ 0.21
PSPC1-204ENST00000492741 ATP6V1G1O75348 118 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms