RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	PATE2	Q6UY27	113 aa		10.84	□□□□□ -0.67
MRPL55-231	ENST00000492170	BAP18	Q8IXM2	172 aa		10.84	□□□□□ -0.67
MRPL55-231	ENST00000492170	OR5C1	Q8NGR4	320 aa		10.84	□□□□□ -0.67
MRPL55-231	ENST00000492170	MBD2	Q9UBB5	411 aa		10.84	□□□□□ -0.67
MRPL55-231	ENST00000492170	RPL29	P47914	159 aa	Known RBP	10.83	□□□□□ -0.68
MRPL55-231	ENST00000492170	HIST1H1A	Q02539	215 aa	Predicted RBP	10.83	□□□□□ -0.68
MRPL55-231	ENST00000492170	RAB31	Q13636	194 aa		10.83	□□□□□ -0.68
MRPL55-231	ENST00000492170	OPCML	Q14982	345 aa		10.83	□□□□□ -0.68
MRPL55-231	ENST00000492170	C1orf134	Q5TEV5	83 aa		10.83	□□□□□ -0.68
MRPL55-231	ENST00000492170	ATG101	Q9BSB4	218 aa		10.83	□□□□□ -0.68
MRPL55-231	ENST00000492170	ARL6	Q9H0F7	186 aa		10.83	□□□□□ -0.68
MRPL55-231	ENST00000492170	PPP1R14D	Q9NXH3	145 aa		10.83	□□□□□ -0.68
MRPL55-231	ENST00000492170	RNF24	Q9Y225	148 aa		10.83	□□□□□ -0.68
MRPL55-231	ENST00000492170	HSPB11	Q9Y547	144 aa		10.83	□□□□□ -0.68
MRPL55-231	ENST00000492170	TRAV12-2	A0A075B6T6	113 aa		10.82	□□□□□ -0.68
MRPL55-231	ENST00000492170		A0A087X0K7	114 aa		10.82	□□□□□ -0.68
MRPL55-231	ENST00000492170	PRM2	P04554	102 aa		10.82	□□□□□ -0.68
MRPL55-231	ENST00000492170	GIP	P09681	153 aa	Predicted RBP	10.82	□□□□□ -0.68
MRPL55-231	ENST00000492170	DEFB130B	P0DP73	79 aa		10.82	□□□□□ -0.68
MRPL55-231	ENST00000492170	DEFB130A	P0DP74	79 aa		10.82	□□□□□ -0.68
MRPL55-231	ENST00000492170	RPL12	P30050	165 aa	Known RBP	10.82	□□□□□ -0.68
MRPL55-231	ENST00000492170	RHOB	P62745	196 aa		10.82	□□□□□ -0.68
MRPL55-231	ENST00000492170	TMEM256	Q8N2U0	113 aa		10.82	□□□□□ -0.68
MRPL55-231	ENST00000492170	OR8A1	Q8NGG7	326 aa		10.82	□□□□□ -0.68
MRPL55-231	ENST00000492170	LRRC20	Q8TCA0	184 aa		10.82	□□□□□ -0.68
MRPL55-231	ENST00000492170	TMEM37	Q8WXS4	190 aa		10.82	□□□□□ -0.68
MRPL55-231	ENST00000492170	UHRF2	Q96PU4	802 aa		10.82	□□□□□ -0.68
MRPL55-231	ENST00000492170	ARV1	Q9H2C2	271 aa		10.82	□□□□□ -0.68
MRPL55-231	ENST00000492170	FGF7	P21781	194 aa		10.81	□□□□□ -0.68
MRPL55-231	ENST00000492170	MIC13	Q5XKP0	118 aa		10.81	□□□□□ -0.68
MRPL55-231	ENST00000492170	LINC01587	Q99440	93 aa		10.81	□□□□□ -0.68
MRPL55-231	ENST00000492170	NPCDR1	Q9BY65	106 aa		10.81	□□□□□ -0.68
MRPL55-231	ENST00000492170	NACA	E9PAV3	2078 aa		10.8	□□□□□ -0.68
MRPL55-231	ENST00000492170		F5H768	121 aa		10.8	□□□□□ -0.68
MRPL55-231	ENST00000492170	CLINT1	Q14677	625 aa		10.8	□□□□□ -0.68
MRPL55-231	ENST00000492170	PSG3	Q16557	428 aa		10.8	□□□□□ -0.68
MRPL55-231	ENST00000492170	THAP6	Q8TBB0	222 aa		10.8	□□□□□ -0.68
MRPL55-231	ENST00000492170	ATP5S	Q99766	215 aa		10.8	□□□□□ -0.68
MRPL55-231	ENST00000492170	SLC39A9	Q9NUM3	307 aa		10.8	□□□□□ -0.68
MRPL55-231	ENST00000492170	PLAC8L1	A1L4L8	177 aa		10.79	□□□□□ -0.68
MRPL55-231	ENST00000492170	MRPS12	O15235	138 aa	Known RBP	10.79	□□□□□ -0.68
MRPL55-231	ENST00000492170	COX7A2P2	O60397	106 aa		10.79	□□□□□ -0.68
MRPL55-231	ENST00000492170	ATP5G1	P05496	136 aa		10.79	□□□□□ -0.68
MRPL55-231	ENST00000492170	CXCL2	P19875	107 aa		10.79	□□□□□ -0.68
MRPL55-231	ENST00000492170	AZU1	P20160	251 aa		10.79	□□□□□ -0.68
MRPL55-231	ENST00000492170	ATP5G3	P48201	142 aa		10.79	□□□□□ -0.68
MRPL55-231	ENST00000492170	TAS2R60	P59551	318 aa		10.79	□□□□□ -0.68
MRPL55-231	ENST00000492170		Q6ZRG5	221 aa		10.79	□□□□□ -0.68
MRPL55-231	ENST00000492170	LINC00305	Q7Z4B0	112 aa		10.79	□□□□□ -0.68
MRPL55-231	ENST00000492170	C16orf74	Q96GX8	76 aa		10.79	□□□□□ -0.68
MRPL55-231	ENST00000492170	WDR61	Q9GZS3	305 aa	Known RBP	10.79	□□□□□ -0.68
MRPL55-231	ENST00000492170	PXMP4	Q9Y6I8	212 aa		10.79	□□□□□ -0.68
MRPL55-231	ENST00000492170	NUDT3	O95989	172 aa		10.78	□□□□□ -0.68
MRPL55-231	ENST00000492170	CDKN1B	P46527	198 aa		10.78	□□□□□ -0.68
MRPL55-231	ENST00000492170		Q5BKY6	102 aa		10.78	□□□□□ -0.68
MRPL55-231	ENST00000492170	MORN5	Q5VZ52	161 aa		10.78	□□□□□ -0.68
MRPL55-231	ENST00000492170	C10orf113	Q5VZT2	155 aa		10.78	□□□□□ -0.68
MRPL55-231	ENST00000492170	LCN15	Q6UWW0	184 aa		10.78	□□□□□ -0.68
MRPL55-231	ENST00000492170	OR1L4	Q8NGR5	311 aa		10.78	□□□□□ -0.68
MRPL55-231	ENST00000492170	RPUSD4	Q96CM3	377 aa	Known RBP	10.78	□□□□□ -0.68
MRPL55-231	ENST00000492170	AQP10	Q96PS8	301 aa		10.78	□□□□□ -0.68
MRPL55-231	ENST00000492170	PFDN5	Q99471	154 aa		10.78	□□□□□ -0.68
MRPL55-231	ENST00000492170	SLC50A1	Q9BRV3	221 aa		10.78	□□□□□ -0.68
MRPL55-231	ENST00000492170	PARD6G	Q9BYG4	376 aa	Predicted RBP	10.78	□□□□□ -0.68
MRPL55-231	ENST00000492170	DNAJC4	Q9NNZ3	241 aa		10.78	□□□□□ -0.68
MRPL55-231	ENST00000492170	CBY3	A6NI87	242 aa		10.77	□□□□□ -0.69
MRPL55-231	ENST00000492170		G3V3Q6	166 aa		10.77	□□□□□ -0.69
MRPL55-231	ENST00000492170	HTN1	P15515	57 aa		10.77	□□□□□ -0.69
MRPL55-231	ENST00000492170	KCNIP2	Q9NS61	270 aa		10.77	□□□□□ -0.69
MRPL55-231	ENST00000492170	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.77	□□□□□ -0.69
MRPL55-231	ENST00000492170	CCL18	P55774	89 aa		10.76	□□□□□ -0.69
MRPL55-231	ENST00000492170	ZNF493	Q6ZR52	646 aa		10.76	□□□□□ -0.69
MRPL55-231	ENST00000492170	ZNF575	Q86XF7	245 aa		10.76	□□□□□ -0.69
MRPL55-231	ENST00000492170	WFDC1	Q9HC57	220 aa		10.76	□□□□□ -0.69
MRPL55-231	ENST00000492170	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.76	□□□□□ -0.69
MRPL55-231	ENST00000492170	MUC4	Q99102	2169 aa		10.75	□□□□□ -0.69
MRPL55-231	ENST00000492170	NBDY	A0A0U1RRE5	68 aa		10.75	□□□□□ -0.69
MRPL55-231	ENST00000492170		H7BYZ3	331 aa		10.75	□□□□□ -0.69
MRPL55-231	ENST00000492170	PRB4	P10163	310 aa	Predicted RBP	10.75	□□□□□ -0.69
MRPL55-231	ENST00000492170	BPIFA4P	Q86YQ2	179 aa		10.75	□□□□□ -0.69
MRPL55-231	ENST00000492170	OR2T35	Q8NGX2	323 aa		10.75	□□□□□ -0.69
MRPL55-231	ENST00000492170	OR10J6P	Q8NGY7	276 aa		10.75	□□□□□ -0.69
MRPL55-231	ENST00000492170	ZNRF2	Q8NHG8	242 aa		10.75	□□□□□ -0.69
MRPL55-231	ENST00000492170	RNASE8	Q8TDE3	154 aa	Known RBP	10.75	□□□□□ -0.69
MRPL55-231	ENST00000492170	TMEM263	Q8WUH6	116 aa	Known RBP	10.75	□□□□□ -0.69
MRPL55-231	ENST00000492170	C20orf144	Q9BQM9	153 aa		10.75	□□□□□ -0.69
MRPL55-231	ENST00000492170	SMIM3	Q9BZL3	60 aa		10.75	□□□□□ -0.69
MRPL55-231	ENST00000492170	ABCA13	Q86UQ4	5058 aa		10.74	□□□□□ -0.69
MRPL55-231	ENST00000492170	C17orf112	F2Z3M2	114 aa		10.74	□□□□□ -0.69
MRPL55-231	ENST00000492170	IFNA5	P01569	189 aa		10.74	□□□□□ -0.69
MRPL55-231	ENST00000492170	IGLC2	P0DOY2	106 aa		10.74	□□□□□ -0.69
MRPL55-231	ENST00000492170	C6orf223	Q8N319	242 aa		10.74	□□□□□ -0.69
MRPL55-231	ENST00000492170	RNF141	Q8WVD5	230 aa		10.74	□□□□□ -0.69
MRPL55-231	ENST00000492170	NOP10	Q9NPE3	64 aa	Known RBP	10.74	□□□□□ -0.69
MRPL55-231	ENST00000492170	TNFSF18	Q9UNG2	199 aa		10.74	□□□□□ -0.69
MRPL55-231	ENST00000492170	RNF222	A6NCQ9	220 aa		10.73	□□□□□ -0.69
MRPL55-231	ENST00000492170	SNRPC	P09234	159 aa	Known RBP	10.73	□□□□□ -0.69
MRPL55-231	ENST00000492170	GCSAML	Q5JQS6	135 aa		10.73	□□□□□ -0.69
MRPL55-231	ENST00000492170	CCDC28A	Q8IWP9	274 aa		10.73	□□□□□ -0.69
MRPL55-231	ENST00000492170	LINC00588	Q9Y4M8	146 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms