RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 LYG2Q86SG7 212 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 TMEM17Q86X19 198 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 CLVS1Q8IUQ0 354 aaPredicted RBP1.85□□□□□ -2.11
PHC3-213ENST00000491258 CMTM1Q8IZ96 169 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 TMEM252Q8N6L7 170 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 ZNF680Q8NEM1 530 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 OR1P1Q8NH06 330 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 OR5B3Q8NH48 314 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 GPX8Q8TED1 209 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 BORCS5Q969J3 196 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 LSM10Q969L4 123 aaKnown RBP1.85□□□□□ -2.11
PHC3-213ENST00000491258 YIPF6Q96EC8 236 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 S100A16Q96FQ6 103 aaKnown RBP1.85□□□□□ -2.11
PHC3-213ENST00000491258 SEC22AQ96IW7 307 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 OR10C1Q96KK4 312 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 RNF2Q99496 336 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 C20orf24Q9BUV8 137 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 RHPN1-AS1Q9BWJ2 59 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 HINT2Q9BX68 163 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 MFFQ9GZY8 342 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 Q9H521 79 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 DAZ1Q9NQZ3 744 aaKnown RBP1.85□□□□□ -2.11
PHC3-213ENST00000491258 TMEM14BQ9NUH8 114 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 PRNDQ9UKY0 176 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 OR51B2Q9Y5P1 312 aa1.85□□□□□ -2.11
PHC3-213ENST00000491258 HEATR1Q9H583 2144 aaKnown RBP1.85□□□□□ -2.11
PHC3-213ENST00000491258 YLPM1P49750 1951 aaKnown RBP1.85□□□□□ -2.11
PHC3-213ENST00000491258 FAT4Q6V0I7 4981 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 PLECQ15149 4684 aaKnown RBP1.84□□□□□ -2.11
PHC3-213ENST00000491258 IGHV3OR16-13A0A075B7E8 117 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 IGHV3-49A0A0A0MS15 119 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 TRAV14DV4A0A0A6YYC5 116 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 IGHV3-74A0A0B4J1X5 117 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 LOC105371267A0A1B0GV96 52 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 RAB19A4D1S5 217 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 HELTA6NFD8 242 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 OR4C46A6NHA9 309 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 FBLL1A6NHQ2 334 aaKnown RBP1.84□□□□□ -2.11
PHC3-213ENST00000491258 INS-IGF2F8WCM5 200 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 NUPL2O15504 423 aaKnown RBP1.84□□□□□ -2.11
PHC3-213ENST00000491258 SNAPC5O75971 98 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 YIF1AO95070 293 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 LY6G6CO95867 125 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 MT-CO2P00403 227 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 IGHV3-48P01763 117 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 EIF4EP06730 217 aaKnown RBP1.84□□□□□ -2.11
PHC3-213ENST00000491258 HRH1P35367 487 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 APOC4P55056 127 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 CMC4P56277 68 aaPredicted RBP1.84□□□□□ -2.11
PHC3-213ENST00000491258 TAS2R46P59540 309 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 TAS2R20P59543 309 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 LSM3P62310 102 aaKnown RBP1.84□□□□□ -2.11
PHC3-213ENST00000491258 PRCDQ00LT1 54 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 SMCO1Q147U7 214 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 DEFB135Q30KP9 77 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 Q56UQ5 140 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 UBE2NLQ5JXB2 153 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 TMEM69Q5SWH9 247 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 LGALS9CQ6DKI2 356 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 LPCAT3Q6P1A2 487 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 TOMM20LQ6UXN7 152 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 SMIM15Q7Z3B0 74 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 APRG1Q8IVJ8 170 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 RPP25LQ8N5L8 163 aaKnown RBP1.84□□□□□ -2.11
PHC3-213ENST00000491258 DUSP18Q8NEJ0 188 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 OR5H2Q8NGV7 314 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 RNASE11Q8TAA1 199 aaKnown RBP1.84□□□□□ -2.11
PHC3-213ENST00000491258 SLC25A46Q96AG3 418 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 GALNT14Q96FL9 552 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 TMEM56Q96MV1 263 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 RARRES2Q99969 163 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 NXF2Q9GZY0 626 aaKnown RBP1.84□□□□□ -2.11
PHC3-213ENST00000491258 FXYD6Q9H0Q3 95 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 VSIRQ9H7M9 311 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 IFT46Q9NQC8 304 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 FKBP11Q9NYL4 201 aa1.84□□□□□ -2.11
PHC3-213ENST00000491258 CSMD3Q7Z407 3707 aa1.84□□□□□ -2.12
PHC3-213ENST00000491258 FSIP2Q5CZC0 6907 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.83□□□□□ -2.12
PHC3-213ENST00000491258 IGHV1OR15-1A0A075B7D0 117 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 A0A087WXM4 84 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 TRAV2A0A0B4J234 112 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 SMIM31A0A1B0GVY4 71 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 FAM240BA0A1B0GVZ2 78 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 NUPR2A6NF83 97 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 F8WDY8 70 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 K7EQM0 130 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 DEDDO75618 318 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 TMEM50AO95807 157 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 INSP01308 110 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 IGKV1-5P01602 117 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 CD74P04233 296 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 CD3DP04234 171 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 FABP1P07148 127 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 RNASE2P10153 161 aaKnown RBP1.83□□□□□ -2.12
PHC3-213ENST00000491258 CRYBB3P26998 211 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 S100GP29377 79 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 RCVRNP35243 200 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 ETV6P41212 452 aa1.83□□□□□ -2.12
PHC3-213ENST00000491258 RPL5P46777 297 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms