RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 RPL24P83731 157 aaKnown RBP1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 HIST1H1AQ02539 215 aaPredicted RBP1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 RBPJQ06330 500 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 SLAQ13239 276 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 FXYD3Q14802 87 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 BATFQ16520 125 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 LGALS9BQ3B8N2 356 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 MPV17L2Q567V2 206 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 Q56UQ5 140 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM97Q5BJF2 176 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 BVES-AS1Q5T3Y7 98 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 ZC2HC1BQ5TFG8 222 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 GDF5OSQ5U4N7 250 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 LINC01545Q5VT33 79 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 Q6AWC8 147 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 AMMECR1LQ6DCA0 310 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 LGALS9CQ6DKI2 356 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 HIST2H2BCQ6DN03 193 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 HIST2H2BDQ6DRA6 164 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 PRR27Q6MZM9 219 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 C16orf54Q6UWD8 224 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 C1orf122Q6ZSJ8 110 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 TCF24Q7RTU0 167 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 SMIM15Q7Z3B0 74 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 COX8CQ7Z4L0 72 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 PPP1R27Q86WC6 154 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 BPIFA4PQ86YQ2 179 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 BOD1L2Q8IYS8 172 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 RPRMLQ8N4K4 120 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 TMEM105Q8N8V8 129 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 DEFB108BQ8NET1 73 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 FDCSPQ8NFU4 85 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 OR4X2Q8NGF9 303 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 OR9G4Q8NGQ1 327 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 OR1B1Q8NGR6 318 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 RNF125Q96EQ8 232 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 PGLYRP4Q96LB8 373 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 GAFA1Q96PS6 74 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 VGLL1Q99990 258 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 SLC25A2Q9BXI2 301 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 CST9LQ9H4G1 147 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 RPP21Q9H633 154 aaKnown RBP1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 FNDC4Q9H6D8 234 aaPredicted RBP1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 ZNF430Q9H8G1 570 aaPredicted RBP1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 CLEC5AQ9NY25 188 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 THYN1Q9P016 225 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 CHD7Q9P2D1 2997 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 PEF1Q9UBV8 284 aaKnown RBP1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 RABAC1Q9UI14 185 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 FZR1Q9UM11 496 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 PSG8Q9UQ74 426 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 HIGD1AQ9Y241 93 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 SIGLEC9Q9Y336 463 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 MOB4Q9Y3A3 225 aa1.59□□□□□ -2.15
SNRNP40-207ENST00000491106 ARHGAP32A7KAX9 2087 aa1.59□□□□□ -2.16
SNRNP40-207ENST00000491106 REV3LO60673 3130 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 MALRD1Q5VYJ5 2156 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 TRBV19A0A075B6N1 114 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 A0A1W2PNU3 283 aaPredicted RBP1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 WI2-2373I1.2A0A1W2PRP0 233 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 LINC01546A6NGU7 62 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 SHISA9B4DS77 424 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 GGTLC3B5MD39 225 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 F8W1H4 67 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 BUB1B-PAK6H3BSN5 160 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 H7C423 109 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 I3L2K1 104 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 J3QR89 54 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 K7EMI3 77 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 TAX1BP3O14907 124 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 SCGB2A1O75556 95 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 CNIH1O95406 144 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 IGLV1-47P01700 117 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 IGLV2-23P01705 113 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 RBP4P02753 201 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 TFF1P04155 84 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 IGKV1-16P04430 117 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 IGLC1P0CG04 106 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 SAA1P0DJI8 122 aaPredicted RBP1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 SMIM17P0DL12 118 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 CT45A10P0DMU9 189 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 PYYP10082 97 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 HTR1DP28221 377 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 FCER1GP30273 86 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 FCGR2BP31994 310 aaPredicted RBP1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 RPL27AP46776 148 aaKnown RBP1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 GNG10P50151 68 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 CRIP1P50238 77 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 MFAP4P55083 255 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 DLX6P56179 175 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 TCL1AP56279 114 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 RBX1P62877 108 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 UBE2L3P68036 154 aaKnown RBP1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 WT1-ASQ06250 92 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 PDE6HQ13956 83 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 COTL1Q14019 142 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 PLGLAQ15195 96 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 PSG3Q16557 428 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 TAL2Q16559 108 aa1.58□□□□□ -2.16
SNRNP40-207ENST00000491106 OCIAD2Q56VL3 154 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms