RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 PLP1P60201 277 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 B2MP61769 119 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 RAB11AP62491 216 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 SOHLH1Q5JUK2 328 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 TMEM144Q7Z5S9 345 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 GPR141Q7Z602 305 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 UBE2DNLQ8IWF7 75 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 OR1B1Q8NGR6 318 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 OR1S1Q8NH92 325 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 CIB3Q96Q77 187 aaPredicted RBP4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 BCL7BQ9BQE9 202 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 C7orf50Q9BRJ6 194 aaKnown RBP4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 MRPS26Q9BYN8 205 aaKnown RBP4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 MAGT1Q9H0U3 335 aa4.43□□□□□ -1.7
PRPF40A-210ENST00000489741 NBDYA0A0U1RRE5 68 aa4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 FABP12A6NFH5 140 aa4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 PMS2P5A8MQ11 134 aa4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 H3BRN7 92 aa4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 SYNGR2O43760 224 aa4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 MED6O75586 246 aa4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 SFT2D2O95562 160 aa4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 IGLV2-11P01706 119 aa4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 HTN3P15516 51 aa4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 TMBIM6P55061 237 aa4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 FCN2Q15485 313 aa4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 SPINK13Q1W4C9 94 aa4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 RAB2BQ8WUD1 216 aa4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 PPP1R14BQ96C90 147 aa4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 GPR82Q96P67 336 aa4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 SHANK2-AS3Q9BTD1 123 aa4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 SLC25A39Q9BZJ4 359 aaPredicted RBP4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 TMED3Q9Y3Q3 217 aa4.42□□□□□ -1.7
PRPF40A-210ENST00000489741 A0A087X0K7 114 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 PRAC2D3DTV9 90 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 K7EPK0 472 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 WRBO00258 174 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 MRPS12O15235 138 aaKnown RBP4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 ORM2P19652 201 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 CXCL3P19876 107 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 TAS2R60P59551 318 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 RPP30P78346 268 aaKnown RBP4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 PATE2Q6UY27 113 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 ACOT7LQ6ZUV0 252 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 BAP18Q8IXM2 172 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 TMEM256Q8N2U0 113 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 C6orf223Q8N319 242 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 RNF182Q8N6D2 247 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 LINC00612Q8N6U2 182 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 BPIFCQ8NFQ6 507 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 OR8A1Q8NGG7 326 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 DEDD2Q8WXF8 326 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 SLC25A21Q9BQT8 299 aaPredicted RBP4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 TMEM208Q9BTX3 173 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 SLC25A22Q9H936 323 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 MCUBQ9NWR8 336 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 LINC00588Q9Y4M8 146 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 NACAE9PAV3 2078 aa4.41□□□□□ -1.7
PRPF40A-210ENST00000489741 TRAV12-2A0A075B6T6 113 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 FNDC10F2Z333 226 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 H3BMQ9 156 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 BOLA2-SMG1P6H3BVE0 249 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 HYPMO75409 117 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 INSP01308 110 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 ATP5G1P05496 136 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 DEFB130BP0DP73 79 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 DEFB130AP0DP74 79 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 RPL7P18124 248 aaKnown RBP4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 S100A7P31151 101 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 FAUP35544 74 aaKnown RBP4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 ATP5G3P48201 142 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 PPP1R1AQ13522 171 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 PSG3Q16557 428 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 SPANXN5Q5MJ07 72 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 SERTAD4-AS1Q5TG53 156 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 ZNF493Q6ZR52 646 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 CYP2G1PQ6ZSU1 146 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 TMED4Q7Z7H5 227 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 RNASE8Q8TDE3 154 aaKnown RBP4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 TMEM147Q9BVK8 224 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 STRAPQ9Y3F4 350 aaKnown RBP4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 TIMM8BQ9Y5J9 83 aaPredicted RBP4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 V9GYH0 126 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 HERC1Q15751 4861 aa4.4□□□□□ -1.71
PRPF40A-210ENST00000489741 C16orf90A8MZG2 172 aa4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 F5H768 121 aa4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 IL5P05113 134 aa4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 HOXB5P09067 269 aa4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 CCL18P55774 89 aa4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 AP3S2P59780 193 aa4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 UBE2MP61081 183 aaKnown RBP4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 SELENOTP62341 195 aa4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 TMEM14EPQ6UXP3 125 aa4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 TOMM5Q8N4H5 51 aa4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 ZNF738Q8NE65 137 aa4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 C16orf74Q96GX8 76 aa4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 SMIM8Q96KF7 97 aa4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 FAM210AQ96ND0 272 aa4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 LINC01587Q99440 93 aa4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 ATG101Q9BSB4 218 aa4.39□□□□□ -1.71
PRPF40A-210ENST00000489741 Q9H8V8 135 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms