RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 LEMD1Q68G75 181 aa7.89□□□□□ -1.15
SCAMP4-208ENST00000489554 LINC00322Q6ZN03 302 aaPredicted RBP7.89□□□□□ -1.15
SCAMP4-208ENST00000489554 RBPMS2Q6ZRY4 209 aaKnown RBP7.89□□□□□ -1.15
SCAMP4-208ENST00000489554 LINC00305Q7Z4B0 112 aa7.89□□□□□ -1.15
SCAMP4-208ENST00000489554 MUC7Q8TAX7 377 aa7.89□□□□□ -1.15
SCAMP4-208ENST00000489554 TCEAL7Q9BRU2 100 aa7.89□□□□□ -1.15
SCAMP4-208ENST00000489554 C20orf24Q9BUV8 137 aa7.89□□□□□ -1.15
SCAMP4-208ENST00000489554 SLC25A2Q9BXI2 301 aa7.89□□□□□ -1.15
SCAMP4-208ENST00000489554 IGHV3OR16-13A0A075B7E8 117 aa7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 IGHV3-49A0A0A0MS15 119 aa7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 IGHV3-74A0A0B4J1X5 117 aa7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 ZNF98A6NK75 572 aa7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 PAGE4O60829 102 aa7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 MT-ND4LP03901 98 aa7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 GCHFRP30047 84 aa7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 RNF212Q495C1 297 aa7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 CST9LP1Q5W188 147 aa7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 C16orf54Q6UWD8 224 aa7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 DEFB125Q8N687 156 aa7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 GLMPQ8WWB7 406 aa7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 BTF3L4Q96K17 158 aa7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 SMIM7Q9BQ49 75 aa7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 SRD5A3Q9H8P0 318 aa7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 SMPXQ9UHP9 88 aa7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 RABAC1Q9UI14 185 aa7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 TMA7Q9Y2S6 64 aaKnown RBP7.88□□□□□ -1.15
SCAMP4-208ENST00000489554 IGHV3-66A0A0C4DH42 116 aa7.87□□□□□ -1.15
SCAMP4-208ENST00000489554 CHEK1O14757 476 aa7.87□□□□□ -1.15
SCAMP4-208ENST00000489554 PPP1R2P9O14990 202 aa7.87□□□□□ -1.15
SCAMP4-208ENST00000489554 ARL14EPLP0DKL9 152 aa7.87□□□□□ -1.15
SCAMP4-208ENST00000489554 NPPCP23582 126 aa7.87□□□□□ -1.15
SCAMP4-208ENST00000489554 FAM90A2PQ658T7 463 aa7.87□□□□□ -1.15
SCAMP4-208ENST00000489554 ANAPC16Q96DE5 110 aa7.87□□□□□ -1.15
SCAMP4-208ENST00000489554 METTL26Q96S19 204 aa7.87□□□□□ -1.15
SCAMP4-208ENST00000489554 SPAG8Q99932 426 aaPredicted RBP7.87□□□□□ -1.15
SCAMP4-208ENST00000489554 WFDC10AQ9H1F0 79 aa7.87□□□□□ -1.15
SCAMP4-208ENST00000489554 SDF2L1Q9HCN8 221 aa7.87□□□□□ -1.15
SCAMP4-208ENST00000489554 SELENOKQ9Y6D0 94 aa7.87□□□□□ -1.15
SCAMP4-208ENST00000489554 A0A1W2PRE2 83 aa7.86□□□□□ -1.15
SCAMP4-208ENST00000489554 RBMY1BA6NDE4 496 aaKnown RBP7.86□□□□□ -1.15
SCAMP4-208ENST00000489554 RBMY1EA6NEQ0 496 aaKnown RBP7.86□□□□□ -1.15
SCAMP4-208ENST00000489554 FAM74A7A6NL05 159 aa7.86□□□□□ -1.15
SCAMP4-208ENST00000489554 RBMY1DP0C7P1 496 aaKnown RBP7.86□□□□□ -1.15
SCAMP4-208ENST00000489554 RHPN1-AS1Q9BWJ2 59 aa7.86□□□□□ -1.15
SCAMP4-208ENST00000489554 TMPRSS5Q9H3S3 457 aa7.86□□□□□ -1.15
SCAMP4-208ENST00000489554 EDA2RQ9HAV5 297 aa7.86□□□□□ -1.15
SCAMP4-208ENST00000489554 OR4C46A6NHA9 309 aa7.85□□□□□ -1.15
SCAMP4-208ENST00000489554 OR7C2O60412 319 aa7.85□□□□□ -1.15
SCAMP4-208ENST00000489554 IGLC2P0DOY2 106 aa7.85□□□□□ -1.15
SCAMP4-208ENST00000489554 PYYP10082 97 aa7.85□□□□□ -1.15
SCAMP4-208ENST00000489554 ATF4P18848 351 aaPredicted RBP7.85□□□□□ -1.15
SCAMP4-208ENST00000489554 S100PP25815 95 aa7.85□□□□□ -1.15
SCAMP4-208ENST00000489554 CASC10Q5T4H9 136 aa7.85□□□□□ -1.15
SCAMP4-208ENST00000489554 C1orf194Q5T5A4 169 aa7.85□□□□□ -1.15
SCAMP4-208ENST00000489554 TMEM88Q6PEY1 159 aa7.85□□□□□ -1.15
SCAMP4-208ENST00000489554 FXYD5Q96DB9 178 aa7.85□□□□□ -1.15
SCAMP4-208ENST00000489554 PARLQ9H300 379 aa7.85□□□□□ -1.15
SCAMP4-208ENST00000489554 TMEM14CQ9P0S9 112 aa7.85□□□□□ -1.15
SCAMP4-208ENST00000489554 LY96Q9Y6Y9 160 aa7.85□□□□□ -1.15
SCAMP4-208ENST00000489554 KMT2CQ8NEZ4 4911 aaKnown RBP7.85□□□□□ -1.15
SCAMP4-208ENST00000489554 LOC102724200A0A096LPH7 203 aaPredicted RBP7.84□□□□□ -1.15
SCAMP4-208ENST00000489554 S100A9P06702 114 aaKnown RBP7.84□□□□□ -1.15
SCAMP4-208ENST00000489554 BMI1P35226 326 aa7.84□□□□□ -1.15
SCAMP4-208ENST00000489554 RAB5BP61020 215 aa7.84□□□□□ -1.15
SCAMP4-208ENST00000489554 RPL19P84098 196 aaKnown RBP7.84□□□□□ -1.15
SCAMP4-208ENST00000489554 FLI1Q01543 452 aaPredicted RBP7.84□□□□□ -1.15
SCAMP4-208ENST00000489554 ZNF674Q2M3X9 581 aa7.84□□□□□ -1.15
SCAMP4-208ENST00000489554 CBLN2Q8IUK8 224 aa7.84□□□□□ -1.15
SCAMP4-208ENST00000489554 OR51M1Q9H341 326 aa7.84□□□□□ -1.15
SCAMP4-208ENST00000489554 DNAH7Q8WXX0 4024 aa7.83□□□□□ -1.16
SCAMP4-208ENST00000489554 A0A087X0K7 114 aa7.83□□□□□ -1.16
SCAMP4-208ENST00000489554 C1orf196B1AJZ1 125 aa7.83□□□□□ -1.16
SCAMP4-208ENST00000489554 NDUFB4O95168 129 aa7.83□□□□□ -1.16
SCAMP4-208ENST00000489554 UBE2G2P60604 165 aa7.83□□□□□ -1.16
SCAMP4-208ENST00000489554 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.83□□□□□ -1.16
SCAMP4-208ENST00000489554 SIGLEC15Q6ZMC9 328 aa7.83□□□□□ -1.16
SCAMP4-208ENST00000489554 C11orf52Q96A22 123 aa7.83□□□□□ -1.16
SCAMP4-208ENST00000489554 FAM110AQ9BQ89 295 aa7.83□□□□□ -1.16
SCAMP4-208ENST00000489554 PAXXQ9BUH6 204 aa7.83□□□□□ -1.16
SCAMP4-208ENST00000489554 ZNF586Q9NXT0 402 aa7.83□□□□□ -1.16
SCAMP4-208ENST00000489554 A0A1W2PS18 150 aa7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 COLCA2A8K830 154 aa7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 C9JCJ5 164 aa7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 H3BTX0 84 aa7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 SLC17A3O00476 420 aa7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 SOCS3O14543 225 aa7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 SNRPCP09234 159 aaKnown RBP7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 OR10J4P0C629 311 aa7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 CMC4P56277 68 aaPredicted RBP7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 UBE2L3P68036 154 aaKnown RBP7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 ADIRFQ15847 76 aa7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 KCNIP4Q6PIL6 250 aa7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 TCF24Q7RTU0 167 aa7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 BPIFA4PQ86YQ2 179 aa7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 OR8I2Q8N0Y5 310 aa7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 DCANP1Q8TF63 244 aa7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 GPR82Q96P67 336 aa7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 IMMP2LQ96T52 175 aa7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 RETNQ9HD89 108 aa7.82□□□□□ -1.16
SCAMP4-208ENST00000489554 NBEAL2Q6ZNJ1 2754 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms