RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 C20orf202A1L168 122 aa8.39□□□□□ -1.07
COL21A1-211ENST00000488912 C11orf94C9JXX5 98 aa8.39□□□□□ -1.07
COL21A1-211ENST00000488912 PFN1P07737 140 aaKnown RBP8.39□□□□□ -1.07
COL21A1-211ENST00000488912 CST9LP1Q5W188 147 aa8.39□□□□□ -1.07
COL21A1-211ENST00000488912 UNQ9165/PRO28630Q6UXU0 137 aa8.39□□□□□ -1.07
COL21A1-211ENST00000488912 STXBP6Q8NFX7 210 aa8.39□□□□□ -1.07
COL21A1-211ENST00000488912 WIPF2Q8TF74 440 aaPredicted RBP8.39□□□□□ -1.07
COL21A1-211ENST00000488912 UBE2E2Q96LR5 201 aa8.39□□□□□ -1.07
COL21A1-211ENST00000488912 C16orf95Q9H693 158 aa8.39□□□□□ -1.07
COL21A1-211ENST00000488912 CCL25O15444 150 aa8.38□□□□□ -1.07
COL21A1-211ENST00000488912 ZNF207O43670 478 aaKnown RBP8.38□□□□□ -1.07
COL21A1-211ENST00000488912 LGALS1P09382 135 aaKnown RBP8.38□□□□□ -1.07
COL21A1-211ENST00000488912 PTTG1IPP53801 180 aa8.38□□□□□ -1.07
COL21A1-211ENST00000488912 HIST2H2BDQ6DRA6 164 aa8.38□□□□□ -1.07
COL21A1-211ENST00000488912 OR4F5Q8NH21 305 aa8.38□□□□□ -1.07
COL21A1-211ENST00000488912 OR4F4Q96R69 305 aa8.38□□□□□ -1.07
COL21A1-211ENST00000488912 IMMP2LQ96T52 175 aa8.38□□□□□ -1.07
COL21A1-211ENST00000488912 C2CD3Q4AC94 2353 aa8.38□□□□□ -1.07
COL21A1-211ENST00000488912 NDUFA4O00483 81 aa8.38□□□□□ -1.07
COL21A1-211ENST00000488912 SCGB1D1O95968 90 aa8.38□□□□□ -1.07
COL21A1-211ENST00000488912 TEX43Q6ZNM6 134 aa8.38□□□□□ -1.07
COL21A1-211ENST00000488912 C18orf65Q6ZTR6 163 aa8.38□□□□□ -1.07
COL21A1-211ENST00000488912 NUDT10Q8NFP7 164 aa8.38□□□□□ -1.07
COL21A1-211ENST00000488912 S100A7AQ86SG5 101 aa8.37□□□□□ -1.07
COL21A1-211ENST00000488912 BLNKQ8WV28 456 aa8.37□□□□□ -1.07
COL21A1-211ENST00000488912 TMEM14CQ9P0S9 112 aa8.37□□□□□ -1.07
COL21A1-211ENST00000488912 GGTLC3B5MD39 225 aa8.37□□□□□ -1.07
COL21A1-211ENST00000488912 H3BTX0 84 aa8.37□□□□□ -1.07
COL21A1-211ENST00000488912 MRPS12O15235 138 aaKnown RBP8.37□□□□□ -1.07
COL21A1-211ENST00000488912 NDUFA7O95182 113 aa8.37□□□□□ -1.07
COL21A1-211ENST00000488912 APOHP02749 345 aaPredicted RBP8.37□□□□□ -1.07
COL21A1-211ENST00000488912 KHDC1LQ5JSQ8 128 aa8.37□□□□□ -1.07
COL21A1-211ENST00000488912 BPIFA4PQ86YQ2 179 aa8.37□□□□□ -1.07
COL21A1-211ENST00000488912 OR2D3Q8NGH3 330 aa8.37□□□□□ -1.07
COL21A1-211ENST00000488912 TMEM190Q8WZ59 177 aa8.37□□□□□ -1.07
COL21A1-211ENST00000488912 METTL26Q96S19 204 aa8.37□□□□□ -1.07
COL21A1-211ENST00000488912 ARL2-SNX15V9GYD0 113 aa8.37□□□□□ -1.07
COL21A1-211ENST00000488912 NIPBLQ6KC79 2804 aaeCLIP8.37□□□□□ -1.07
COL21A1-211ENST00000488912 TEP1Q99973 2627 aaKnown RBP8.37□□□□□ -1.07
COL21A1-211ENST00000488912 IGHV3OR16-13A0A075B7E8 117 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 IGHV3-49A0A0A0MS15 119 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 IGHV3-74A0A0B4J1X5 117 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 IGHV3-66A0A0C4DH42 116 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 BUB3O43684 328 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 NBEAP1P0C6P0 100 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 FAM3BP58499 235 aaPredicted RBP8.36□□□□□ -1.07
COL21A1-211ENST00000488912 UBE2V1Q13404 147 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 C11orf44Q8N8P7 122 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 ZNF586Q9NXT0 402 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 IGHV4OR15-8A0A075B7B6 117 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 A0A087WW49 117 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 A0A1W2PRE2 83 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 ZNF320A2RRD8 509 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 HAX1O00165 279 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 IGLC2P0DOY2 106 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 NPPCP23582 126 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 CRYBB3P26998 211 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 RPEL1Q2QD12 228 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 DEFB136Q30KP8 78 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 ACTL10Q5JWF8 245 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 LINC01551Q86U37 167 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 OR8I2Q8N0Y5 310 aa8.36□□□□□ -1.07
COL21A1-211ENST00000488912 ALKBH7Q9BT30 221 aaPredicted RBP8.36□□□□□ -1.07
COL21A1-211ENST00000488912 TMEM250H0YL14 139 aa8.35□□□□□ -1.07
COL21A1-211ENST00000488912 PDE6DO43924 150 aa8.35□□□□□ -1.07
COL21A1-211ENST00000488912 HIST1H1EP10412 219 aaKnown RBP8.35□□□□□ -1.07
COL21A1-211ENST00000488912 OR4F17Q8NGA8 305 aa8.35□□□□□ -1.07
COL21A1-211ENST00000488912 C4orf3Q8WVX3 66 aa8.35□□□□□ -1.07
COL21A1-211ENST00000488912 TXNDC17Q9BRA2 123 aa8.35□□□□□ -1.07
COL21A1-211ENST00000488912 ELOVL1Q9BW60 279 aa8.35□□□□□ -1.07
COL21A1-211ENST00000488912 SCO2A0A1W2PP80 73 aa8.35□□□□□ -1.07
COL21A1-211ENST00000488912 TYMSP04818 313 aa8.35□□□□□ -1.07
COL21A1-211ENST00000488912 CD28P10747 220 aa8.35□□□□□ -1.07
COL21A1-211ENST00000488912 RPL7P18124 248 aaKnown RBP8.35□□□□□ -1.07
COL21A1-211ENST00000488912 S100A7P31151 101 aa8.35□□□□□ -1.07
COL21A1-211ENST00000488912 SUMO1P63165 101 aaKnown RBP8.35□□□□□ -1.07
COL21A1-211ENST00000488912 C16orf54Q6UWD8 224 aa8.35□□□□□ -1.07
COL21A1-211ENST00000488912 GPHB5Q86YW7 130 aa8.35□□□□□ -1.07
COL21A1-211ENST00000488912 RPUSD4Q96CM3 377 aaKnown RBP8.35□□□□□ -1.07
COL21A1-211ENST00000488912 C17orf77Q96MU5 243 aa8.35□□□□□ -1.07
COL21A1-211ENST00000488912 RNF114Q9Y508 228 aa8.35□□□□□ -1.07
COL21A1-211ENST00000488912 U3KQE9 123 aa8.35□□□□□ -1.07
COL21A1-211ENST00000488912 JMJD1CQ15652 2540 aa8.35□□□□□ -1.07
COL21A1-211ENST00000488912 TMEM238C9JI98 176 aa8.34□□□□□ -1.07
COL21A1-211ENST00000488912 HOXD3P31249 432 aaPredicted RBP8.34□□□□□ -1.07
COL21A1-211ENST00000488912 TFPI2P48307 235 aa8.34□□□□□ -1.07
COL21A1-211ENST00000488912 RPS20P60866 119 aaKnown RBP8.34□□□□□ -1.07
COL21A1-211ENST00000488912 FAM106AQ4KMX7 169 aa8.34□□□□□ -1.07
COL21A1-211ENST00000488912 KLHL30-AS1Q8NEE0 82 aa8.34□□□□□ -1.07
COL21A1-211ENST00000488912 DAZ1Q9NQZ3 744 aaKnown RBP8.34□□□□□ -1.07
COL21A1-211ENST00000488912 RNF24Q9Y225 148 aa8.34□□□□□ -1.07
COL21A1-211ENST00000488912 TRBV19A0A075B6N1 114 aa8.34□□□□□ -1.08
COL21A1-211ENST00000488912 F6UZH7 168 aa8.34□□□□□ -1.08
COL21A1-211ENST00000488912 SLC17A3O00476 420 aa8.34□□□□□ -1.08
COL21A1-211ENST00000488912 NDUFB4O95168 129 aa8.34□□□□□ -1.08
COL21A1-211ENST00000488912 MYCNOSP40205 109 aa8.34□□□□□ -1.08
COL21A1-211ENST00000488912 PROK1P58294 105 aa8.34□□□□□ -1.08
COL21A1-211ENST00000488912 TM4SF20Q53R12 229 aa8.34□□□□□ -1.08
COL21A1-211ENST00000488912 DERL1Q9BUN8 251 aa8.34□□□□□ -1.08
COL21A1-211ENST00000488912 CSTL1Q9H114 145 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms