RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 GNPNAT1Q96EK6 184 aaPredicted RBP12.49□□□□□ -0.41
SHROOM1-205ENST00000488072 SLC50A1Q9BRV3 221 aa12.49□□□□□ -0.41
SHROOM1-205ENST00000488072 TMPRSS5Q9H3S3 457 aa12.49□□□□□ -0.41
SHROOM1-205ENST00000488072 KANTRA0A1W2PQU2 76 aa12.48□□□□□ -0.41
SHROOM1-205ENST00000488072 PFDN1O60925 122 aa12.48□□□□□ -0.41
SHROOM1-205ENST00000488072 FGF8P55075 233 aaPredicted RBP12.48□□□□□ -0.41
SHROOM1-205ENST00000488072 RANP62826 216 aaKnown RBP12.48□□□□□ -0.41
SHROOM1-205ENST00000488072 SERF2P84101 59 aa12.48□□□□□ -0.41
SHROOM1-205ENST00000488072 ERCC8Q13216 396 aa12.48□□□□□ -0.41
SHROOM1-205ENST00000488072 SAMD13Q5VXD3 122 aa12.48□□□□□ -0.41
SHROOM1-205ENST00000488072 Q6ZWC4 215 aa12.48□□□□□ -0.41
SHROOM1-205ENST00000488072 C9orf62Q8N4C0 152 aa12.48□□□□□ -0.41
SHROOM1-205ENST00000488072 CSNK1G2-AS1Q8NCQ2 148 aa12.48□□□□□ -0.41
SHROOM1-205ENST00000488072 RNF24Q9Y225 148 aa12.48□□□□□ -0.41
SHROOM1-205ENST00000488072 STAB2Q8WWQ8 2551 aa12.47□□□□□ -0.41
SHROOM1-205ENST00000488072 IGKV2-40A0A087WW87 121 aaPredicted RBP12.47□□□□□ -0.41
SHROOM1-205ENST00000488072 M0R2Z0 102 aa12.47□□□□□ -0.41
SHROOM1-205ENST00000488072 UBE2CO00762 179 aa12.47□□□□□ -0.41
SHROOM1-205ENST00000488072 DEFB4AO15263 64 aa12.47□□□□□ -0.41
SHROOM1-205ENST00000488072 IGKV2D-40P01614 121 aaPredicted RBP12.47□□□□□ -0.41
SHROOM1-205ENST00000488072 PRM2P04554 102 aa12.47□□□□□ -0.41
SHROOM1-205ENST00000488072 STAG3L2P0CL84 134 aa12.47□□□□□ -0.41
SHROOM1-205ENST00000488072 STAG3L3P0CL85 134 aa12.47□□□□□ -0.41
SHROOM1-205ENST00000488072 GUK1Q16774 197 aa12.47□□□□□ -0.41
SHROOM1-205ENST00000488072 KHDC3LQ587J8 217 aa12.47□□□□□ -0.41
SHROOM1-205ENST00000488072 BOLA1Q9Y3E2 137 aa12.47□□□□□ -0.41
SHROOM1-205ENST00000488072 TRAV12-2A0A075B6T6 113 aa12.46□□□□□ -0.41
SHROOM1-205ENST00000488072 A8MTW9 85 aa12.46□□□□□ -0.41
SHROOM1-205ENST00000488072 PSG9Q00887 426 aa12.46□□□□□ -0.41
SHROOM1-205ENST00000488072 SPINK13Q1W4C9 94 aa12.46□□□□□ -0.41
SHROOM1-205ENST00000488072 TMED6Q8WW62 240 aa12.46□□□□□ -0.41
SHROOM1-205ENST00000488072 ACTR3CQ9C0K3 210 aaPredicted RBP12.46□□□□□ -0.41
SHROOM1-205ENST00000488072 Q9H3A6 140 aa12.46□□□□□ -0.41
SHROOM1-205ENST00000488072 EDA2RQ9HAV5 297 aa12.46□□□□□ -0.41
SHROOM1-205ENST00000488072 ZNF253O75346 499 aa12.45□□□□□ -0.42
SHROOM1-205ENST00000488072 GCHFRP30047 84 aa12.45□□□□□ -0.42
SHROOM1-205ENST00000488072 TAS2R45P59539 299 aa12.45□□□□□ -0.42
SHROOM1-205ENST00000488072 AKR1C8PQ5T2L2 129 aa12.45□□□□□ -0.42
SHROOM1-205ENST00000488072 MORN3Q6PF18 240 aaPredicted RBP12.45□□□□□ -0.42
SHROOM1-205ENST00000488072 OR11H2Q8NH07 326 aa12.45□□□□□ -0.42
SHROOM1-205ENST00000488072 A0A0J9YWU9 116 aa12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 A0A1B0GV50 99 aa12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 J3KRW8 73 aa12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 CRXO43186 299 aaPredicted RBP12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 MBP02144 154 aa12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 RBMY1A1P0DJD3 496 aaKnown RBP12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 RBMY1CP0DJD4 496 aa12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 CT45A10P0DMU9 189 aa12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 GNG5P63218 68 aa12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 RBMY1FQ15415 496 aaKnown RBP12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 ZFP69Q49AA0 526 aa12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 IQCF2Q8IXL9 164 aa12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 BAP18Q8IXM2 172 aa12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 C1orf158Q8N1D5 194 aa12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 HYLS1Q96M11 299 aa12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 RARRES2Q99969 163 aa12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 VGLL1Q99990 258 aa12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 X6R8D5 127 aa12.44□□□□□ -0.42
SHROOM1-205ENST00000488072 DNAH7Q8WXX0 4024 aa12.43□□□□□ -0.42
SHROOM1-205ENST00000488072 IGHV3OR16-12A0A075B7B8 117 aa12.43□□□□□ -0.42
SHROOM1-205ENST00000488072 PDE6HQ13956 83 aa12.43□□□□□ -0.42
SHROOM1-205ENST00000488072 AGPAT4-IT1Q9H0P7 198 aa12.43□□□□□ -0.42
SHROOM1-205ENST00000488072 RPH3ALQ9UNE2 315 aa12.43□□□□□ -0.42
SHROOM1-205ENST00000488072 CTXND1A0A1B0GTU2 59 aa12.42□□□□□ -0.42
SHROOM1-205ENST00000488072 PGPA6NDG6 321 aa12.42□□□□□ -0.42
SHROOM1-205ENST00000488072 DUSP14O95147 198 aaKnown RBP12.42□□□□□ -0.42
SHROOM1-205ENST00000488072 PQLC2Q6ZP29 291 aa12.42□□□□□ -0.42
SHROOM1-205ENST00000488072 TP53TG1Q9Y2A0 90 aa12.42□□□□□ -0.42
SHROOM1-205ENST00000488072 NPIPB6E9PJ23 425 aa12.41□□□□□ -0.42
SHROOM1-205ENST00000488072 SEC11BP0C7V7 166 aa12.41□□□□□ -0.42
SHROOM1-205ENST00000488072 TPT1P13693 172 aaKnown RBP12.41□□□□□ -0.42
SHROOM1-205ENST00000488072 Q6ZQT7 251 aa12.41□□□□□ -0.42
SHROOM1-205ENST00000488072 Q8TAT8 98 aa12.41□□□□□ -0.42
SHROOM1-205ENST00000488072 STOML3Q8TAV4 291 aa12.41□□□□□ -0.42
SHROOM1-205ENST00000488072 FAM213BQ8TBF2 198 aa12.41□□□□□ -0.42
SHROOM1-205ENST00000488072 CLUHP3Q96NS8 147 aa12.41□□□□□ -0.42
SHROOM1-205ENST00000488072 AAMDCQ9H7C9 122 aa12.41□□□□□ -0.42
SHROOM1-205ENST00000488072 YTHDF2Q9Y5A9 579 aaKnown RBP12.41□□□□□ -0.42
SHROOM1-205ENST00000488072 IGHV4-28A0A0C4DH34 117 aa12.4□□□□□ -0.42
SHROOM1-205ENST00000488072 MAP1LC3B2A6NCE7 125 aa12.4□□□□□ -0.42
SHROOM1-205ENST00000488072 BOLA2-SMG1P6H3BVE0 249 aa12.4□□□□□ -0.42
SHROOM1-205ENST00000488072 UBE2G2P60604 165 aa12.4□□□□□ -0.42
SHROOM1-205ENST00000488072 FAM74A1Q5RGS3 127 aa12.4□□□□□ -0.42
SHROOM1-205ENST00000488072 OR10J6PQ8NGY7 276 aa12.4□□□□□ -0.42
SHROOM1-205ENST00000488072 SUN5Q8TC36 379 aa12.4□□□□□ -0.42
SHROOM1-205ENST00000488072 MRPL53Q96EL3 112 aaKnown RBP12.4□□□□□ -0.42
SHROOM1-205ENST00000488072 SGK494Q96LW2 274 aa12.4□□□□□ -0.42
SHROOM1-205ENST00000488072 WWC2-AS2Q96NR7 200 aa12.4□□□□□ -0.42
SHROOM1-205ENST00000488072 MAP1LC3BQ9GZQ8 125 aa12.4□□□□□ -0.42
SHROOM1-205ENST00000488072 ZNF705EA8MWA4 302 aaPredicted RBP12.39□□□□□ -0.43
SHROOM1-205ENST00000488072 CXorf1O96002 111 aa12.39□□□□□ -0.43
SHROOM1-205ENST00000488072 NUTF2P61970 127 aaKnown RBP12.39□□□□□ -0.43
SHROOM1-205ENST00000488072 PRR9Q5T870 116 aa12.39□□□□□ -0.43
SHROOM1-205ENST00000488072 Q8NAQ8 132 aa12.39□□□□□ -0.43
SHROOM1-205ENST00000488072 OTORQ9NRC9 128 aa12.39□□□□□ -0.43
SHROOM1-205ENST00000488072 PRELID1Q9Y255 219 aa12.39□□□□□ -0.43
SHROOM1-205ENST00000488072 GGTLC3B5MD39 225 aa12.38□□□□□ -0.43
SHROOM1-205ENST00000488072 DIRC3C9JPN6 131 aa12.38□□□□□ -0.43
SHROOM1-205ENST00000488072 ZFAND6Q6FIF0 208 aa12.38□□□□□ -0.43
SHROOM1-205ENST00000488072 IGF2BP2-AS1Q96M15 143 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms