RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 SNRPCP09234 159 aaKnown RBP7.96□□□□□ -1.14
HLA-DMB-261ENST00000487996 CD300EQ496F6 205 aaPredicted RBP7.96□□□□□ -1.14
HLA-DMB-261ENST00000487996 TMEM61Q8N0U2 210 aa7.96□□□□□ -1.14
HLA-DMB-261ENST00000487996 HIST1H2BAQ96A08 127 aa7.96□□□□□ -1.14
HLA-DMB-261ENST00000487996 RPUSD4Q96CM3 377 aaKnown RBP7.96□□□□□ -1.14
HLA-DMB-261ENST00000487996 C17orf77Q96MU5 243 aa7.96□□□□□ -1.14
HLA-DMB-261ENST00000487996 K7EQM0 130 aa7.95□□□□□ -1.14
HLA-DMB-261ENST00000487996 SLC25A5P05141 298 aaKnown RBP7.95□□□□□ -1.14
HLA-DMB-261ENST00000487996 ATP5G3P48201 142 aa7.95□□□□□ -1.14
HLA-DMB-261ENST00000487996 ICAM4Q14773 271 aa7.95□□□□□ -1.14
HLA-DMB-261ENST00000487996 GBGT1Q8N5D6 347 aa7.95□□□□□ -1.14
HLA-DMB-261ENST00000487996 DCANP1Q8TF63 244 aa7.95□□□□□ -1.14
HLA-DMB-261ENST00000487996 RARRES2Q99969 163 aa7.95□□□□□ -1.14
HLA-DMB-261ENST00000487996 TREM1Q9NP99 234 aa7.95□□□□□ -1.14
HLA-DMB-261ENST00000487996 K7EQG2 157 aa7.95□□□□□ -1.14
HLA-DMB-261ENST00000487996 SOCS3O14543 225 aa7.95□□□□□ -1.14
HLA-DMB-261ENST00000487996 CMC4P56277 68 aaPredicted RBP7.95□□□□□ -1.14
HLA-DMB-261ENST00000487996 CD81P60033 236 aa7.95□□□□□ -1.14
HLA-DMB-261ENST00000487996 CCDC28AQ8IWP9 274 aa7.95□□□□□ -1.14
HLA-DMB-261ENST00000487996 EXOC3-AS1Q8N2X6 119 aa7.95□□□□□ -1.14
HLA-DMB-261ENST00000487996 ATG101Q9BSB4 218 aa7.95□□□□□ -1.14
HLA-DMB-261ENST00000487996 SLC35B3Q9H1N7 401 aa7.95□□□□□ -1.14
HLA-DMB-261ENST00000487996 FBLL1A6NHQ2 334 aaKnown RBP7.94□□□□□ -1.14
HLA-DMB-261ENST00000487996 PSG3Q16557 428 aa7.94□□□□□ -1.14
HLA-DMB-261ENST00000487996 PRR31Q5SQ13 230 aa7.94□□□□□ -1.14
HLA-DMB-261ENST00000487996 WFDC3Q8IUB2 231 aa7.94□□□□□ -1.14
HLA-DMB-261ENST00000487996 LINC00528Q8N1L1 170 aa7.94□□□□□ -1.14
HLA-DMB-261ENST00000487996 C11orf52Q96A22 123 aa7.94□□□□□ -1.14
HLA-DMB-261ENST00000487996 EPDR1Q9UM22 224 aa7.94□□□□□ -1.14
HLA-DMB-261ENST00000487996 SORL1Q92673 2214 aa7.93□□□□□ -1.14
HLA-DMB-261ENST00000487996 LOC105371267A0A1B0GV96 52 aa7.93□□□□□ -1.14
HLA-DMB-261ENST00000487996 PEX7O00628 323 aa7.93□□□□□ -1.14
HLA-DMB-261ENST00000487996 S100A9P06702 114 aaKnown RBP7.93□□□□□ -1.14
HLA-DMB-261ENST00000487996 BTF3P20290 206 aaKnown RBP7.93□□□□□ -1.14
HLA-DMB-261ENST00000487996 TFPI2P48307 235 aa7.93□□□□□ -1.14
HLA-DMB-261ENST00000487996 GUCA2BQ16661 112 aa7.93□□□□□ -1.14
HLA-DMB-261ENST00000487996 CYB561D1Q8N8Q1 229 aa7.93□□□□□ -1.14
HLA-DMB-261ENST00000487996 ZNF738Q8NE65 137 aa7.93□□□□□ -1.14
HLA-DMB-261ENST00000487996 VWFP04275 2813 aa7.93□□□□□ -1.14
HLA-DMB-261ENST00000487996 TRAV8-2A0A0B4J237 113 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 RBAKDNA6NC62 111 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 TCRAP04437 139 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 SRP19P09132 144 aaKnown RBP7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 AKR1C3P42330 323 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 CNN1P51911 297 aaKnown RBP7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 LINC00052Q96N35 136 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 CITED4Q96RK1 184 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 SELENOKQ9Y6D0 94 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 SCO2A0A1W2PP80 73 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 DIRC3C9JPN6 131 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 M0R3E3 92 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 ZNF688P0C7X2 276 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 UBE2G1P62253 170 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 SRSF3P84103 164 aaKnown RBP7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 FAM74A3Q4VXF1 159 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 SOHLH1Q5JUK2 328 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 NBEAL1Q6ZS30 2694 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 RNF182Q8N6D2 247 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 FAM110AQ9BQ89 295 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 RPH3ALQ9UNE2 315 aa7.92□□□□□ -1.14
HLA-DMB-261ENST00000487996 SFTA3P0C7M3 94 aa7.91□□□□□ -1.14
HLA-DMB-261ENST00000487996 LORP23490 312 aaPredicted RBP7.91□□□□□ -1.14
HLA-DMB-261ENST00000487996 CEBPGP53567 150 aa7.91□□□□□ -1.14
HLA-DMB-261ENST00000487996 PSMG4Q5JS54 123 aa7.91□□□□□ -1.14
HLA-DMB-261ENST00000487996 OR10J6PQ8NGY7 276 aa7.91□□□□□ -1.14
HLA-DMB-261ENST00000487996 FMC1Q96HJ9 113 aa7.91□□□□□ -1.14
HLA-DMB-261ENST00000487996 ZNF256Q9Y2P7 627 aaPredicted RBP7.91□□□□□ -1.14
HLA-DMB-261ENST00000487996 TMEM218A2RU14 115 aa7.9□□□□□ -1.14
HLA-DMB-261ENST00000487996 IZUMO1RA6ND01 250 aa7.9□□□□□ -1.14
HLA-DMB-261ENST00000487996 KRBOX1C9JBD0 128 aa7.9□□□□□ -1.14
HLA-DMB-261ENST00000487996 IGLL1P15814 213 aa7.9□□□□□ -1.14
HLA-DMB-261ENST00000487996 GNG5P63218 68 aa7.9□□□□□ -1.14
HLA-DMB-261ENST00000487996 IGFL4Q6B9Z1 124 aa7.9□□□□□ -1.14
HLA-DMB-261ENST00000487996 EBLN2Q6P2I7 272 aa7.9□□□□□ -1.14
HLA-DMB-261ENST00000487996 GOLT1AQ6ZVE7 132 aa7.9□□□□□ -1.14
HLA-DMB-261ENST00000487996 GTSCR1Q86UQ5 136 aa7.9□□□□□ -1.14
HLA-DMB-261ENST00000487996 TMEM75Q8N9X5 138 aa7.9□□□□□ -1.14
HLA-DMB-261ENST00000487996 C2CD4CQ8TF44 421 aa7.9□□□□□ -1.14
HLA-DMB-261ENST00000487996 OR11H12B2RN74 326 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 HLA-DMBP28068 263 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 TAS2R60P59551 318 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 TMEM183BQ1AE95 376 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 BEAN1Q3B7T3 259 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 TMEM78Q5T7P6 136 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 FOXI2Q6ZQN5 318 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 C20orf173Q96LM9 149 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 SMIM7Q9BQ49 75 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 PARLQ9H300 379 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 KLF12Q9Y4X4 402 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 TRRAPQ9Y4A5 3859 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 ZNF727A8MUV8 499 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 ZNF705FA8MVS1 300 aaPredicted RBP7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 C9JQL5 133 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 F8W036 122 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 DUSP14O95147 198 aaKnown RBP7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 RPL35P42766 123 aaKnown RBP7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 DEFB131AP59861 70 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 ZNF674Q2M3X9 581 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 OR8A1Q8NGG7 326 aa7.89□□□□□ -1.15
HLA-DMB-261ENST00000487996 SMIM12Q96EX1 92 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms