RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 C9orf62Q8N4C0 152 aa6.9□□□□□ -1.3
TMEM39A-207ENST00000482162 RNF182Q8N6D2 247 aa6.9□□□□□ -1.3
TMEM39A-207ENST00000482162 POM121L12Q8N7R1 296 aa6.9□□□□□ -1.3
TMEM39A-207ENST00000482162 OR8A1Q8NGG7 326 aa6.9□□□□□ -1.3
TMEM39A-207ENST00000482162 OR5C1Q8NGR4 320 aa6.9□□□□□ -1.3
TMEM39A-207ENST00000482162 MGST2Q99735 147 aa6.9□□□□□ -1.3
TMEM39A-207ENST00000482162 ATP5SQ99766 215 aa6.9□□□□□ -1.3
TMEM39A-207ENST00000482162 ARV1Q9H2C2 271 aa6.9□□□□□ -1.3
TMEM39A-207ENST00000482162 YTHDF2Q9Y5A9 579 aaKnown RBP6.9□□□□□ -1.3
TMEM39A-207ENST00000482162 IGHV3OR16-12A0A075B7B8 117 aa6.89□□□□□ -1.31
TMEM39A-207ENST00000482162 LOC102723971A0A1B0GUV8 181 aa6.89□□□□□ -1.31
TMEM39A-207ENST00000482162 PLAC8L1A1L4L8 177 aa6.89□□□□□ -1.31
TMEM39A-207ENST00000482162 IFNA5P01569 189 aa6.89□□□□□ -1.31
TMEM39A-207ENST00000482162 P0DMU3 169 aa6.89□□□□□ -1.31
TMEM39A-207ENST00000482162 FAM231AP0DMU4 169 aa6.89□□□□□ -1.31
TMEM39A-207ENST00000482162 FAM231CP0DMU5 169 aa6.89□□□□□ -1.31
TMEM39A-207ENST00000482162 NKX2-5P52952 324 aaPredicted RBP6.89□□□□□ -1.31
TMEM39A-207ENST00000482162 EMP1P54849 157 aa6.89□□□□□ -1.31
TMEM39A-207ENST00000482162 RRN3P1Q2M238 152 aa6.89□□□□□ -1.31
TMEM39A-207ENST00000482162 LGALSLQ3ZCW2 172 aaPredicted RBP6.89□□□□□ -1.31
TMEM39A-207ENST00000482162 MORN5Q5VZ52 161 aa6.89□□□□□ -1.31
TMEM39A-207ENST00000482162 SAT2Q96F10 170 aaPredicted RBP6.89□□□□□ -1.31
TMEM39A-207ENST00000482162 NDUFAF3Q9BU61 184 aa6.89□□□□□ -1.31
TMEM39A-207ENST00000482162 ZNF331Q9NQX6 463 aaPredicted RBP6.89□□□□□ -1.31
TMEM39A-207ENST00000482162 UQCC1Q9NVA1 299 aa6.89□□□□□ -1.31
TMEM39A-207ENST00000482162 WDR83OSQ9Y284 106 aa6.89□□□□□ -1.31
TMEM39A-207ENST00000482162 MPDU1O75352 247 aa6.88□□□□□ -1.31
TMEM39A-207ENST00000482162 IGLC2P0DOY2 106 aa6.88□□□□□ -1.31
TMEM39A-207ENST00000482162 RAB31Q13636 194 aa6.88□□□□□ -1.31
TMEM39A-207ENST00000482162 CLINT1Q14677 625 aa6.88□□□□□ -1.31
TMEM39A-207ENST00000482162 OPCMLQ14982 345 aa6.88□□□□□ -1.31
TMEM39A-207ENST00000482162 SPINK13Q1W4C9 94 aa6.88□□□□□ -1.31
TMEM39A-207ENST00000482162 LINC00305Q7Z4B0 112 aa6.88□□□□□ -1.31
TMEM39A-207ENST00000482162 SLC51BQ86UW2 128 aa6.88□□□□□ -1.31
TMEM39A-207ENST00000482162 ZNF471Q9BX82 626 aaPredicted RBP6.88□□□□□ -1.31
TMEM39A-207ENST00000482162 PARD6GQ9BYG4 376 aaPredicted RBP6.88□□□□□ -1.31
TMEM39A-207ENST00000482162 DNAJC4Q9NNZ3 241 aa6.88□□□□□ -1.31
TMEM39A-207ENST00000482162 KCNIP2Q9NS61 270 aa6.88□□□□□ -1.31
TMEM39A-207ENST00000482162 LYRM9A8MSI8 78 aa6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 ZNF705GA8MUZ8 300 aaPredicted RBP6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 H3BQ15 152 aa6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 M0R2Z0 102 aa6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 INSP01308 110 aa6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 PRM2P04554 102 aa6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 TPT1P13693 172 aaKnown RBP6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 AZU1P20160 251 aa6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 RPL29P47914 159 aaKnown RBP6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 LGALS9BQ3B8N2 356 aa6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 EIF5AL1Q6IS14 154 aaKnown RBP6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 LCN15Q6UWW0 184 aa6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 Q6ZR54 194 aa6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 BPIFA4PQ86YQ2 179 aa6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 TMEM256Q8N2U0 113 aa6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 ZNF738Q8NE65 137 aa6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 SCGB1C1Q8TD33 95 aa6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 RPUSD4Q96CM3 377 aaKnown RBP6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 SLC50A1Q9BRV3 221 aa6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 SMIM3Q9BZL3 60 aa6.87□□□□□ -1.31
TMEM39A-207ENST00000482162 UBE2L5PA0A1B0GUS4 154 aa6.86□□□□□ -1.31
TMEM39A-207ENST00000482162 C17orf112F2Z3M2 114 aa6.86□□□□□ -1.31
TMEM39A-207ENST00000482162 CAMLGP49069 296 aa6.86□□□□□ -1.31
TMEM39A-207ENST00000482162 TAS2R60P59551 318 aa6.86□□□□□ -1.31
TMEM39A-207ENST00000482162 GUK1Q16774 197 aa6.86□□□□□ -1.31
TMEM39A-207ENST00000482162 RNF212Q495C1 297 aa6.86□□□□□ -1.31
TMEM39A-207ENST00000482162 C10orf113Q5VZT2 155 aa6.86□□□□□ -1.31
TMEM39A-207ENST00000482162 LINC00336Q6ZUF6 198 aa6.86□□□□□ -1.31
TMEM39A-207ENST00000482162 BAP18Q8IXM2 172 aa6.86□□□□□ -1.31
TMEM39A-207ENST00000482162 STOML3Q8TAV4 291 aa6.86□□□□□ -1.31
TMEM39A-207ENST00000482162 GNPNAT1Q96EK6 184 aaPredicted RBP6.86□□□□□ -1.31
TMEM39A-207ENST00000482162 HERC2O95714 4834 aa6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 TRAV12-2A0A075B6T6 113 aa6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 A0A1B0GVY2 172 aa6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 PRAC2D3DTV9 90 aa6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 COX7A2P2O60397 106 aa6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 ZNF253O75346 499 aa6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 FGF7P21781 194 aa6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 HIST1H1AQ02539 215 aaPredicted RBP6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 MIC13Q5XKP0 118 aa6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 RPL7L1Q6DKI1 246 aaKnown RBP6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 ZNF493Q6ZR52 646 aa6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 LINC00612Q8N6U2 182 aa6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 ODF3Q96PU9 254 aa6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 C20orf144Q9BQM9 153 aa6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 TMEM208Q9BTX3 173 aa6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 WDR61Q9GZS3 305 aaKnown RBP6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 SLC39A9Q9NUM3 307 aa6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 TIMM9Q9Y5J7 89 aa6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 PXMP4Q9Y6I8 212 aa6.85□□□□□ -1.31
TMEM39A-207ENST00000482162 DNAH17Q9UFH2 4485 aa6.84□□□□□ -1.31
TMEM39A-207ENST00000482162 TRAV5A0A0B4J249 113 aa6.84□□□□□ -1.31
TMEM39A-207ENST00000482162 SLC17A3O00476 420 aa6.84□□□□□ -1.31
TMEM39A-207ENST00000482162 RTL8CO15255 209 aa6.84□□□□□ -1.31
TMEM39A-207ENST00000482162 CDKN1BP46527 198 aa6.84□□□□□ -1.31
TMEM39A-207ENST00000482162 DAD1P61803 113 aa6.84□□□□□ -1.31
TMEM39A-207ENST00000482162 TMEM88Q6PEY1 159 aa6.84□□□□□ -1.31
TMEM39A-207ENST00000482162 Q6ZRG5 221 aa6.84□□□□□ -1.31
TMEM39A-207ENST00000482162 LRRC20Q8TCA0 184 aa6.84□□□□□ -1.31
TMEM39A-207ENST00000482162 RNASE8Q8TDE3 154 aaKnown RBP6.84□□□□□ -1.31
TMEM39A-207ENST00000482162 MRPL53Q96EL3 112 aaKnown RBP6.84□□□□□ -1.31
TMEM39A-207ENST00000482162 PHYHIPLQ96FC7 376 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 1537.1 ms