RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 C17orf77Q96MU5 243 aa7.66□□□□□ -1.18
USP39-215ENST00000481409 SEC11CQ9BY50 192 aa7.66□□□□□ -1.18
USP39-215ENST00000481409 MS4A6AQ9H2W1 248 aa7.66□□□□□ -1.18
USP39-215ENST00000481409 TEP1Q99973 2627 aaKnown RBP7.66□□□□□ -1.18
USP39-215ENST00000481409 SLC17A3O00476 420 aa7.65□□□□□ -1.18
USP39-215ENST00000481409 PEX7O00628 323 aa7.65□□□□□ -1.18
USP39-215ENST00000481409 TCRAP04437 139 aa7.65□□□□□ -1.18
USP39-215ENST00000481409 CD33P20138 364 aa7.65□□□□□ -1.18
USP39-215ENST00000481409 S100A1P23297 94 aa7.65□□□□□ -1.18
USP39-215ENST00000481409 CNN1P51911 297 aaKnown RBP7.65□□□□□ -1.18
USP39-215ENST00000481409 KRTAP21-3Q3LHN1 58 aa7.65□□□□□ -1.18
USP39-215ENST00000481409 CD300EQ496F6 205 aaPredicted RBP7.65□□□□□ -1.18
USP39-215ENST00000481409 SLC7A5P1Q8MH63 180 aa7.65□□□□□ -1.18
USP39-215ENST00000481409 TMEM75Q8N9X5 138 aa7.65□□□□□ -1.18
USP39-215ENST00000481409 C2CD4CQ8TF44 421 aa7.65□□□□□ -1.18
USP39-215ENST00000481409 FMC1Q96HJ9 113 aa7.65□□□□□ -1.18
USP39-215ENST00000481409 CITED4Q96RK1 184 aa7.65□□□□□ -1.18
USP39-215ENST00000481409 PPP1R14DQ9NXH3 145 aa7.65□□□□□ -1.18
USP39-215ENST00000481409 KLF12Q9Y4X4 402 aa7.65□□□□□ -1.18
USP39-215ENST00000481409 LY96Q9Y6Y9 160 aa7.65□□□□□ -1.18
USP39-215ENST00000481409 TRBV7-9A0A0J9YWB2 115 aa7.64□□□□□ -1.19
USP39-215ENST00000481409 C9JCJ5 164 aa7.64□□□□□ -1.19
USP39-215ENST00000481409 DIRC3C9JPN6 131 aa7.64□□□□□ -1.19
USP39-215ENST00000481409 SFTA3P0C7M3 94 aa7.64□□□□□ -1.19
USP39-215ENST00000481409 AKR1C3P42330 323 aa7.64□□□□□ -1.19
USP39-215ENST00000481409 SRSF3P84103 164 aaKnown RBP7.64□□□□□ -1.19
USP39-215ENST00000481409 PNRC1Q12796 327 aaPredicted RBP7.64□□□□□ -1.19
USP39-215ENST00000481409 TMEM183BQ1AE95 376 aa7.64□□□□□ -1.19
USP39-215ENST00000481409 C10orf91Q5T1B1 145 aa7.64□□□□□ -1.19
USP39-215ENST00000481409 TMEM61Q8N0U2 210 aa7.64□□□□□ -1.19
USP39-215ENST00000481409 EXOC3-AS1Q8N2X6 119 aa7.64□□□□□ -1.19
USP39-215ENST00000481409 BIN3Q9NQY0 253 aa7.64□□□□□ -1.19
USP39-215ENST00000481409 LENEPQ9Y5L5 61 aa7.64□□□□□ -1.19
USP39-215ENST00000481409 TRAV8-2A0A0B4J237 113 aa7.63□□□□□ -1.19
USP39-215ENST00000481409 SCO2A0A1W2PP80 73 aa7.63□□□□□ -1.19
USP39-215ENST00000481409 F8W036 122 aa7.63□□□□□ -1.19
USP39-215ENST00000481409 EDN2P20800 178 aa7.63□□□□□ -1.19
USP39-215ENST00000481409 UBE2G1P62253 170 aa7.63□□□□□ -1.19
USP39-215ENST00000481409 PRR31Q5SQ13 230 aa7.63□□□□□ -1.19
USP39-215ENST00000481409 HIST2H2BDQ6DRA6 164 aa7.63□□□□□ -1.19
USP39-215ENST00000481409 NIPSNAP3BQ9BS92 247 aa7.63□□□□□ -1.19
USP39-215ENST00000481409 PARLQ9H300 379 aa7.63□□□□□ -1.19
USP39-215ENST00000481409 ZFP30Q9Y2G7 519 aa7.63□□□□□ -1.19
USP39-215ENST00000481409 CARHSP1Q9Y2V2 147 aaKnown RBP7.63□□□□□ -1.19
USP39-215ENST00000481409 ZNF727A8MUV8 499 aa7.62□□□□□ -1.19
USP39-215ENST00000481409 C9JQL5 133 aa7.62□□□□□ -1.19
USP39-215ENST00000481409 H3BTX0 84 aa7.62□□□□□ -1.19
USP39-215ENST00000481409 DUSP14O95147 198 aaKnown RBP7.62□□□□□ -1.19
USP39-215ENST00000481409 SAPCD1Q5SSQ6 148 aa7.62□□□□□ -1.19
USP39-215ENST00000481409 C9orf47Q6ZRZ4 202 aa7.62□□□□□ -1.19
USP39-215ENST00000481409 ZNF738Q8NE65 137 aa7.62□□□□□ -1.19
USP39-215ENST00000481409 OR10J6PQ8NGY7 276 aa7.62□□□□□ -1.19
USP39-215ENST00000481409 LINC00477Q96M19 166 aa7.62□□□□□ -1.19
USP39-215ENST00000481409 CLUHP3Q96NS8 147 aa7.62□□□□□ -1.19
USP39-215ENST00000481409 SMIM7Q9BQ49 75 aa7.62□□□□□ -1.19
USP39-215ENST00000481409 NAT8Q9UHE5 227 aa7.62□□□□□ -1.19
USP39-215ENST00000481409 ZNF256Q9Y2P7 627 aaPredicted RBP7.62□□□□□ -1.19
USP39-215ENST00000481409 SETD2Q9BYW2 2564 aaPredicted RBP7.62□□□□□ -1.19
USP39-215ENST00000481409 M0R3E3 92 aa7.61□□□□□ -1.19
USP39-215ENST00000481409 SNRPCP09234 159 aaKnown RBP7.61□□□□□ -1.19
USP39-215ENST00000481409 RPL35P42766 123 aaKnown RBP7.61□□□□□ -1.19
USP39-215ENST00000481409 TMEM241Q24JQ0 296 aa7.61□□□□□ -1.19
USP39-215ENST00000481409 BEAN1Q3B7T3 259 aa7.61□□□□□ -1.19
USP39-215ENST00000481409 TMEM78Q5T7P6 136 aa7.61□□□□□ -1.19
USP39-215ENST00000481409 EBLN2Q6P2I7 272 aa7.61□□□□□ -1.19
USP39-215ENST00000481409 FOXI2Q6ZQN5 318 aa7.61□□□□□ -1.19
USP39-215ENST00000481409 GOLT1AQ6ZVE7 132 aa7.61□□□□□ -1.19
USP39-215ENST00000481409 COX8CQ7Z4L0 72 aa7.61□□□□□ -1.19
USP39-215ENST00000481409 SVBPQ8N300 66 aa7.61□□□□□ -1.19
USP39-215ENST00000481409 GBGT1Q8N5D6 347 aa7.61□□□□□ -1.19
USP39-215ENST00000481409 ODF3Q96PU9 254 aa7.61□□□□□ -1.19
USP39-215ENST00000481409 NDFIP1Q9BT67 221 aa7.61□□□□□ -1.19
USP39-215ENST00000481409 TMA7Q9Y2S6 64 aaKnown RBP7.61□□□□□ -1.19
USP39-215ENST00000481409 ATRQ13535 2644 aa7.61□□□□□ -1.19
USP39-215ENST00000481409 IGKV3-7A0A075B6H7 116 aa7.6□□□□□ -1.19
USP39-215ENST00000481409 B4DEV8 164 aa7.6□□□□□ -1.19
USP39-215ENST00000481409 NPIPB6E9PJ23 425 aa7.6□□□□□ -1.19
USP39-215ENST00000481409 LTAP01374 205 aa7.6□□□□□ -1.19
USP39-215ENST00000481409 GNG4P50150 75 aa7.6□□□□□ -1.19
USP39-215ENST00000481409 FLI1Q01543 452 aaPredicted RBP7.6□□□□□ -1.19
USP39-215ENST00000481409 GUCA2BQ16661 112 aa7.6□□□□□ -1.19
USP39-215ENST00000481409 LCE2AQ5TA79 106 aaPredicted RBP7.6□□□□□ -1.19
USP39-215ENST00000481409 WFDC3Q8IUB2 231 aa7.6□□□□□ -1.19
USP39-215ENST00000481409 RNF182Q8N6D2 247 aa7.6□□□□□ -1.19
USP39-215ENST00000481409 OR8A1Q8NGG7 326 aa7.6□□□□□ -1.19
USP39-215ENST00000481409 SPATA3Q8NHX4 192 aa7.6□□□□□ -1.19
USP39-215ENST00000481409 LINC00052Q96N35 136 aa7.6□□□□□ -1.19
USP39-215ENST00000481409 ATP6V1G1O75348 118 aa7.59□□□□□ -1.19
USP39-215ENST00000481409 SNAPINO95295 136 aa7.59□□□□□ -1.19
USP39-215ENST00000481409 IGLV2-11P01706 119 aa7.59□□□□□ -1.19
USP39-215ENST00000481409 ZNF688P0C7X2 276 aa7.59□□□□□ -1.19
USP39-215ENST00000481409 ZNF138P52744 262 aa7.59□□□□□ -1.19
USP39-215ENST00000481409 CEBPGP53567 150 aa7.59□□□□□ -1.19
USP39-215ENST00000481409 GNG5P63218 68 aa7.59□□□□□ -1.19
USP39-215ENST00000481409 ZNF674Q2M3X9 581 aa7.59□□□□□ -1.19
USP39-215ENST00000481409 PSMG4Q5JS54 123 aa7.59□□□□□ -1.19
USP39-215ENST00000481409 GTSCR1Q86UQ5 136 aa7.59□□□□□ -1.19
USP39-215ENST00000481409 BAGE2Q86Y30 109 aa7.59□□□□□ -1.19
USP39-215ENST00000481409 TMEM183AQ8IXX5 376 aa7.59□□□□□ -1.19
USP39-215ENST00000481409 TVP23CQ96ET8 276 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms