RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 SSX7Q7RTT5 188 aa6.67□□□□□ -1.34
VCP-206ENST00000480327 ZNF738Q8NE65 137 aa6.67□□□□□ -1.34
VCP-206ENST00000480327 TMED6Q8WW62 240 aa6.67□□□□□ -1.34
VCP-206ENST00000480327 RAB24Q969Q5 203 aa6.67□□□□□ -1.34
VCP-206ENST00000480327 FXYD5Q96DB9 178 aa6.67□□□□□ -1.34
VCP-206ENST00000480327 FAM110AQ9BQ89 295 aa6.67□□□□□ -1.34
VCP-206ENST00000480327 ACTR3CQ9C0K3 210 aaPredicted RBP6.67□□□□□ -1.34
VCP-206ENST00000480327 ZNF331Q9NQX6 463 aaPredicted RBP6.67□□□□□ -1.34
VCP-206ENST00000480327 TRBV19A0A075B6N1 114 aa6.66□□□□□ -1.34
VCP-206ENST00000480327 LOC102724200A0A096LPH7 203 aaPredicted RBP6.66□□□□□ -1.34
VCP-206ENST00000480327 BOLA2-SMG1P6H3BVE0 249 aa6.66□□□□□ -1.34
VCP-206ENST00000480327 NDUFB4O95168 129 aa6.66□□□□□ -1.34
VCP-206ENST00000480327 SEC11BP0C7V7 166 aa6.66□□□□□ -1.34
VCP-206ENST00000480327 ARL14EPLP0DKL9 152 aa6.66□□□□□ -1.34
VCP-206ENST00000480327 FHITP49789 147 aa6.66□□□□□ -1.34
VCP-206ENST00000480327 FGF8P55075 233 aaPredicted RBP6.66□□□□□ -1.34
VCP-206ENST00000480327 ZNF726P1Q15940 193 aa6.66□□□□□ -1.34
VCP-206ENST00000480327 PSG3Q16557 428 aa6.66□□□□□ -1.34
VCP-206ENST00000480327 SAMD13Q5VXD3 122 aa6.66□□□□□ -1.34
VCP-206ENST00000480327 STHQ8IWL8 128 aa6.66□□□□□ -1.34
VCP-206ENST00000480327 EXOC3-AS1Q8N2X6 119 aa6.66□□□□□ -1.34
VCP-206ENST00000480327 FAM213BQ8TBF2 198 aa6.66□□□□□ -1.34
VCP-206ENST00000480327 SAT2Q96F10 170 aaPredicted RBP6.66□□□□□ -1.34
VCP-206ENST00000480327 PHYHIPLQ96FC7 376 aa6.66□□□□□ -1.34
VCP-206ENST00000480327 SLC50A1Q9BRV3 221 aa6.66□□□□□ -1.34
VCP-206ENST00000480327 KIAA1109Q2LD37 5005 aa6.65□□□□□ -1.34
VCP-206ENST00000480327 A0A1B0GV50 99 aa6.65□□□□□ -1.34
VCP-206ENST00000480327 STAG3L2P0CL84 134 aa6.65□□□□□ -1.34
VCP-206ENST00000480327 STAG3L3P0CL85 134 aa6.65□□□□□ -1.34
VCP-206ENST00000480327 C4BPBP20851 252 aa6.65□□□□□ -1.34
VCP-206ENST00000480327 RANP62826 216 aaKnown RBP6.65□□□□□ -1.34
VCP-206ENST00000480327 GUK1Q16774 197 aa6.65□□□□□ -1.34
VCP-206ENST00000480327 EBLN2Q6P2I7 272 aa6.65□□□□□ -1.34
VCP-206ENST00000480327 PQLC2Q6ZP29 291 aa6.65□□□□□ -1.34
VCP-206ENST00000480327 SLC51BQ86UW2 128 aa6.65□□□□□ -1.34
VCP-206ENST00000480327 OR4B1Q8NGF8 309 aa6.65□□□□□ -1.34
VCP-206ENST00000480327 STOML3Q8TAV4 291 aa6.65□□□□□ -1.34
VCP-206ENST00000480327 RPUSD4Q96CM3 377 aaKnown RBP6.65□□□□□ -1.34
VCP-206ENST00000480327 TMPRSS5Q9H3S3 457 aa6.65□□□□□ -1.34
VCP-206ENST00000480327 SAV1Q9H4B6 383 aaPredicted RBP6.65□□□□□ -1.34
VCP-206ENST00000480327 HECTD4Q9Y4D8 3996 aa6.64□□□□□ -1.35
VCP-206ENST00000480327 A0A0J9YX75 114 aa6.64□□□□□ -1.35
VCP-206ENST00000480327 CTXND1A0A1B0GTU2 59 aa6.64□□□□□ -1.35
VCP-206ENST00000480327 PRAC2D3DTV9 90 aa6.64□□□□□ -1.35
VCP-206ENST00000480327 H3BMM0 161 aa6.64□□□□□ -1.35
VCP-206ENST00000480327 M0R3E3 92 aa6.64□□□□□ -1.35
VCP-206ENST00000480327 CXorf1O96002 111 aa6.64□□□□□ -1.35
VCP-206ENST00000480327 GCHFRP30047 84 aa6.64□□□□□ -1.35
VCP-206ENST00000480327 FXYD7P58549 80 aa6.64□□□□□ -1.35
VCP-206ENST00000480327 PSG9Q00887 426 aa6.64□□□□□ -1.35
VCP-206ENST00000480327 HIST1H1AQ02539 215 aaPredicted RBP6.64□□□□□ -1.35
VCP-206ENST00000480327 ICAM4Q14773 271 aa6.64□□□□□ -1.35
VCP-206ENST00000480327 FAM74A1Q5RGS3 127 aa6.64□□□□□ -1.35
VCP-206ENST00000480327 FOXI2Q6ZQN5 318 aa6.64□□□□□ -1.35
VCP-206ENST00000480327 TRPT1Q86TN4 253 aaKnown RBP6.64□□□□□ -1.35
VCP-206ENST00000480327 AAMDCQ9H7C9 122 aa6.64□□□□□ -1.35
VCP-206ENST00000480327 DNAH6Q9C0G6 4158 aa6.64□□□□□ -1.35
VCP-206ENST00000480327 MAP1LC3B2A6NCE7 125 aa6.63□□□□□ -1.35
VCP-206ENST00000480327 UMAD1C9J7I0 102 aa6.63□□□□□ -1.35
VCP-206ENST00000480327 ZNF253O75346 499 aa6.63□□□□□ -1.35
VCP-206ENST00000480327 CA1P00915 261 aaPredicted RBP6.63□□□□□ -1.35
VCP-206ENST00000480327 HLA-DRB4P13762 266 aa6.63□□□□□ -1.35
VCP-206ENST00000480327 APOC4P55056 127 aa6.63□□□□□ -1.35
VCP-206ENST00000480327 PDE6HQ13956 83 aa6.63□□□□□ -1.35
VCP-206ENST00000480327 EIF5AL1Q6IS14 154 aaKnown RBP6.63□□□□□ -1.35
VCP-206ENST00000480327 SFT2D1Q8WV19 159 aa6.63□□□□□ -1.35
VCP-206ENST00000480327 MAP1LC3BQ9GZQ8 125 aa6.63□□□□□ -1.35
VCP-206ENST00000480327 CSTL1Q9H114 145 aa6.63□□□□□ -1.35
VCP-206ENST00000480327 Q9H3A6 140 aa6.63□□□□□ -1.35
VCP-206ENST00000480327 RPH3ALQ9UNE2 315 aa6.63□□□□□ -1.35
VCP-206ENST00000480327 HLA-DRB4X5D2U9 266 aa6.63□□□□□ -1.35
VCP-206ENST00000480327 PGPA6NDG6 321 aa6.62□□□□□ -1.35
VCP-206ENST00000480327 H2AFB1P0C5Y9 115 aa6.62□□□□□ -1.35
VCP-206ENST00000480327 CNN1P51911 297 aaKnown RBP6.62□□□□□ -1.35
VCP-206ENST00000480327 UBE2G2P60604 165 aa6.62□□□□□ -1.35
VCP-206ENST00000480327 ERCC8Q13216 396 aa6.62□□□□□ -1.35
VCP-206ENST00000480327 DEFB135Q30KP9 77 aa6.62□□□□□ -1.35
VCP-206ENST00000480327 ALKAL2Q6UX46 152 aa6.62□□□□□ -1.35
VCP-206ENST00000480327 OR8A1Q8NGG7 326 aa6.62□□□□□ -1.35
VCP-206ENST00000480327 SLC35B3Q9H1N7 401 aa6.62□□□□□ -1.35
VCP-206ENST00000480327 CLEC5AQ9NY25 188 aa6.62□□□□□ -1.35
VCP-206ENST00000480327 RYR1P21817 5038 aa6.61□□□□□ -1.35
VCP-206ENST00000480327 IGKV2-40A0A087WW87 121 aaPredicted RBP6.61□□□□□ -1.35
VCP-206ENST00000480327 KIR2DL5BA0A0G2JN68 375 aa6.61□□□□□ -1.35
VCP-206ENST00000480327 KIR2DL5BA0A0G2JPC4 375 aa6.61□□□□□ -1.35
VCP-206ENST00000480327 DUSP14O95147 198 aaKnown RBP6.61□□□□□ -1.35
VCP-206ENST00000480327 IGKV2D-40P01614 121 aaPredicted RBP6.61□□□□□ -1.35
VCP-206ENST00000480327 SULT1A2P50226 295 aa6.61□□□□□ -1.35
VCP-206ENST00000480327 GNG5P63218 68 aa6.61□□□□□ -1.35
VCP-206ENST00000480327 DPPA3Q6W0C5 159 aa6.61□□□□□ -1.35
VCP-206ENST00000480327 KIR2DL5AQ8N109 375 aa6.61□□□□□ -1.35
VCP-206ENST00000480327 OR10J6PQ8NGY7 276 aa6.61□□□□□ -1.35
VCP-206ENST00000480327 KIR2DL5BQ8NHK3 375 aa6.61□□□□□ -1.35
VCP-206ENST00000480327 CMTM2Q8TAZ6 248 aa6.61□□□□□ -1.35
VCP-206ENST00000480327 LINC00476Q8WZB0 136 aa6.61□□□□□ -1.35
VCP-206ENST00000480327 TMEM167BQ9NRX6 74 aa6.61□□□□□ -1.35
VCP-206ENST00000480327 PPP1R14DQ9NXH3 145 aa6.61□□□□□ -1.35
VCP-206ENST00000480327 XCL2Q9UBD3 114 aa6.61□□□□□ -1.35
VCP-206ENST00000480327 PRELID1Q9Y255 219 aa6.61□□□□□ -1.35
VCP-206ENST00000480327 ZNF705EA8MWA4 302 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms