RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 H3BP45 60 aa11.57□□□□□ -0.56
HMGN1-212ENST00000479586 WRBO00258 174 aa11.57□□□□□ -0.56
HMGN1-212ENST00000479586 KRTAP10-4P60372 401 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-212ENST00000479586 FHL2Q14192 279 aa11.57□□□□□ -0.56
HMGN1-212ENST00000479586 SPANXN5Q5MJ07 72 aa11.57□□□□□ -0.56
HMGN1-212ENST00000479586 MZT2AQ6P582 158 aa11.57□□□□□ -0.56
HMGN1-212ENST00000479586 MRPL16Q9NX20 251 aaKnown RBP11.57□□□□□ -0.56
HMGN1-212ENST00000479586 TCL1AP56279 114 aa11.56□□□□□ -0.56
HMGN1-212ENST00000479586 RPP30P78346 268 aaKnown RBP11.56□□□□□ -0.56
HMGN1-212ENST00000479586 C10orf126Q8N4M7 172 aa11.56□□□□□ -0.56
HMGN1-212ENST00000479586 ODF3Q96PU9 254 aa11.56□□□□□ -0.56
HMGN1-212ENST00000479586 CIB3Q96Q77 187 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-212ENST00000479586 PRRT1Q99946 306 aa11.56□□□□□ -0.56
HMGN1-212ENST00000479586 ARL6Q9H0F7 186 aa11.56□□□□□ -0.56
HMGN1-212ENST00000479586 C7orf71A4D174 169 aa11.55□□□□□ -0.56
HMGN1-212ENST00000479586 E5RGE8 158 aa11.55□□□□□ -0.56
HMGN1-212ENST00000479586 K7EQD1 137 aa11.55□□□□□ -0.56
HMGN1-212ENST00000479586 MED6O75586 246 aa11.55□□□□□ -0.56
HMGN1-212ENST00000479586 AKAIN1P0CW23 69 aa11.55□□□□□ -0.56
HMGN1-212ENST00000479586 SRIP30626 198 aa11.55□□□□□ -0.56
HMGN1-212ENST00000479586 SRPXP78539 464 aa11.55□□□□□ -0.56
HMGN1-212ENST00000479586 SSBP1Q04837 148 aaKnown RBP11.55□□□□□ -0.56
HMGN1-212ENST00000479586 SLAQ13239 276 aa11.55□□□□□ -0.56
HMGN1-212ENST00000479586 C15orf40Q8WUR7 153 aa11.55□□□□□ -0.56
HMGN1-212ENST00000479586 VGLL1Q99990 258 aa11.55□□□□□ -0.56
HMGN1-212ENST00000479586 ARV1Q9H2C2 271 aa11.55□□□□□ -0.56
HMGN1-212ENST00000479586 SYNGR2O43760 224 aa11.54□□□□□ -0.56
HMGN1-212ENST00000479586 ANXA2RQ3ZCQ2 193 aa11.54□□□□□ -0.56
HMGN1-212ENST00000479586 CLVS1Q8IUQ0 354 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-212ENST00000479586 EIF4E3Q8N5X7 224 aaKnown RBP11.54□□□□□ -0.56
HMGN1-212ENST00000479586 RCL1Q9Y2P8 373 aaKnown RBP11.54□□□□□ -0.56
HMGN1-212ENST00000479586 ANXA3P12429 323 aa11.53□□□□□ -0.56
HMGN1-212ENST00000479586 SELENOTP62341 195 aa11.53□□□□□ -0.56
HMGN1-212ENST00000479586 CD300CQ08708 224 aa11.53□□□□□ -0.56
HMGN1-212ENST00000479586 ZNF415Q09FC8 603 aa11.53□□□□□ -0.56
HMGN1-212ENST00000479586 BTN1A1Q13410 526 aa11.53□□□□□ -0.56
HMGN1-212ENST00000479586 S100A7AQ86SG5 101 aa11.53□□□□□ -0.56
HMGN1-212ENST00000479586 FUNDC2Q9BWH2 189 aa11.53□□□□□ -0.56
HMGN1-212ENST00000479586 TP53TG3Q9ULZ0 132 aa11.53□□□□□ -0.56
HMGN1-212ENST00000479586 LRP2P98164 4655 aa11.53□□□□□ -0.56
HMGN1-212ENST00000479586 DUXBA0A1W2PPF3 345 aa11.52□□□□□ -0.57
HMGN1-212ENST00000479586 SLC25A5P05141 298 aaKnown RBP11.52□□□□□ -0.57
HMGN1-212ENST00000479586 SCXQ7RTU7 201 aa11.52□□□□□ -0.57
HMGN1-212ENST00000479586 LRTM2Q8N967 370 aa11.52□□□□□ -0.57
HMGN1-212ENST00000479586 SMIM4Q8WVI0 70 aa11.52□□□□□ -0.57
HMGN1-212ENST00000479586 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.57
HMGN1-212ENST00000479586 Q9HAA7 133 aa11.52□□□□□ -0.57
HMGN1-212ENST00000479586 STRAPQ9Y3F4 350 aaKnown RBP11.52□□□□□ -0.57
HMGN1-212ENST00000479586 TRGV4A0A0C4DH28 118 aa11.51□□□□□ -0.57
HMGN1-212ENST00000479586 SLC25A6P12236 298 aa11.51□□□□□ -0.57
HMGN1-212ENST00000479586 GYPEP15421 78 aa11.51□□□□□ -0.57
HMGN1-212ENST00000479586 WFDC2Q14508 124 aa11.51□□□□□ -0.57
HMGN1-212ENST00000479586 IBA57Q5T440 356 aaKnown RBP11.51□□□□□ -0.57
HMGN1-212ENST00000479586 MORN5Q5VZ52 161 aa11.51□□□□□ -0.57
HMGN1-212ENST00000479586 LINC00305Q7Z4B0 112 aa11.51□□□□□ -0.57
HMGN1-212ENST00000479586 AP3S1Q92572 193 aa11.51□□□□□ -0.57
HMGN1-212ENST00000479586 MIXL1Q9H2W2 232 aa11.51□□□□□ -0.57
HMGN1-212ENST00000479586 PXMP4Q9Y6I8 212 aa11.51□□□□□ -0.57
HMGN1-212ENST00000479586 KLLNB2CW77 178 aa11.5□□□□□ -0.57
HMGN1-212ENST00000479586 H3BQ15 152 aa11.5□□□□□ -0.57
HMGN1-212ENST00000479586 SFTA3P0C7M3 94 aa11.5□□□□□ -0.57
HMGN1-212ENST00000479586 IGLC2P0DOY2 106 aa11.5□□□□□ -0.57
HMGN1-212ENST00000479586 MRPS10P82664 201 aaKnown RBP11.5□□□□□ -0.57
HMGN1-212ENST00000479586 SLC38A11Q08AI6 406 aa11.5□□□□□ -0.57
HMGN1-212ENST00000479586 ERCC8Q13216 396 aa11.5□□□□□ -0.57
HMGN1-212ENST00000479586 BPIFA4PQ86YQ2 179 aa11.5□□□□□ -0.57
HMGN1-212ENST00000479586 PCNPQ8WW12 178 aaKnown RBP11.5□□□□□ -0.57
HMGN1-212ENST00000479586 SAT2Q96F10 170 aaPredicted RBP11.5□□□□□ -0.57
HMGN1-212ENST00000479586 SCGB3A2Q96PL1 93 aa11.5□□□□□ -0.57
HMGN1-212ENST00000479586 RNF24Q9Y225 148 aa11.5□□□□□ -0.57
HMGN1-212ENST00000479586 IBA57-AS1B1ANH7 110 aa11.49□□□□□ -0.57
HMGN1-212ENST00000479586 CCNKO75909 580 aa11.49□□□□□ -0.57
HMGN1-212ENST00000479586 RNASE4P34096 147 aaKnown RBP11.49□□□□□ -0.57
HMGN1-212ENST00000479586 RRAS2P62070 204 aaPredicted RBP11.49□□□□□ -0.57
HMGN1-212ENST00000479586 VCX3AQ9NNX9 186 aa11.49□□□□□ -0.57
HMGN1-212ENST00000479586 SCP2D1Q9UJQ7 156 aa11.49□□□□□ -0.57
HMGN1-212ENST00000479586 TRAV5A0A0B4J249 113 aa11.48□□□□□ -0.57
HMGN1-212ENST00000479586 IGHV3-38A0A0C4DH36 116 aa11.48□□□□□ -0.57
HMGN1-212ENST00000479586 K7EPK0 472 aa11.48□□□□□ -0.57
HMGN1-212ENST00000479586 MPDU1O75352 247 aa11.48□□□□□ -0.57
HMGN1-212ENST00000479586 LINC01620Q4KN68 170 aa11.48□□□□□ -0.57
HMGN1-212ENST00000479586 Q6ZQT7 251 aa11.48□□□□□ -0.57
HMGN1-212ENST00000479586 ZNF479Q96JC4 524 aa11.48□□□□□ -0.57
HMGN1-212ENST00000479586 MCUBQ9NWR8 336 aa11.48□□□□□ -0.57
HMGN1-212ENST00000479586 PIGBOS1A0A0B4J2F0 54 aa11.47□□□□□ -0.57
HMGN1-212ENST00000479586 ANKRD20A5PA0PJZ0 165 aa11.47□□□□□ -0.57
HMGN1-212ENST00000479586 OR4E1P0C645 316 aa11.47□□□□□ -0.57
HMGN1-212ENST00000479586 OPCMLQ14982 345 aa11.47□□□□□ -0.57
HMGN1-212ENST00000479586 LINC01556Q5JQF7 62 aa11.47□□□□□ -0.57
HMGN1-212ENST00000479586 FAM19A4Q96LR4 140 aa11.47□□□□□ -0.57
HMGN1-212ENST00000479586 RABL2BQ9UNT1 228 aa11.47□□□□□ -0.57
HMGN1-212ENST00000479586 RGS13O14921 159 aa11.46□□□□□ -0.57
HMGN1-212ENST00000479586 ORM1P02763 201 aa11.46□□□□□ -0.57
HMGN1-212ENST00000479586 PRR9Q5T870 116 aa11.46□□□□□ -0.57
HMGN1-212ENST00000479586 BLNKQ8WV28 456 aa11.46□□□□□ -0.57
HMGN1-212ENST00000479586 TMEM37Q8WXS4 190 aa11.46□□□□□ -0.57
HMGN1-212ENST00000479586 TXNDC17Q9BRA2 123 aa11.46□□□□□ -0.57
HMGN1-212ENST00000479586 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-212ENST00000479586 A0A087WXM4 84 aa11.45□□□□□ -0.58
HMGN1-212ENST00000479586 LOC100131303A0A0U1RQF7 123 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms