RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 TEPPQ6URK8 271 aa8.12□□□□□ -1.11
HDAC6-219ENST00000476625 LINC00305Q7Z4B0 112 aa8.12□□□□□ -1.11
HDAC6-219ENST00000476625 DYNC2LI1Q8TCX1 351 aa8.12□□□□□ -1.11
HDAC6-219ENST00000476625 TRIM63Q969Q1 353 aa8.12□□□□□ -1.11
HDAC6-219ENST00000476625 SCGB3A2Q96PL1 93 aa8.12□□□□□ -1.11
HDAC6-219ENST00000476625 CIB3Q96Q77 187 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-219ENST00000476625 MRPL16Q9NX20 251 aaKnown RBP8.12□□□□□ -1.11
HDAC6-219ENST00000476625 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
HDAC6-219ENST00000476625 TRGV2A0A075B6R0 118 aa8.11□□□□□ -1.11
HDAC6-219ENST00000476625 H3BNG1 76 aa8.11□□□□□ -1.11
HDAC6-219ENST00000476625 SLC25A6P12236 298 aa8.11□□□□□ -1.11
HDAC6-219ENST00000476625 TNFSF8P32971 234 aa8.11□□□□□ -1.11
HDAC6-219ENST00000476625 RPP30P78346 268 aaKnown RBP8.11□□□□□ -1.11
HDAC6-219ENST00000476625 OPCMLQ14982 345 aa8.11□□□□□ -1.11
HDAC6-219ENST00000476625 TMEM128Q5BJH2 165 aa8.11□□□□□ -1.11
HDAC6-219ENST00000476625 PRR9Q5T870 116 aa8.11□□□□□ -1.11
HDAC6-219ENST00000476625 LCN15Q6UWW0 184 aa8.11□□□□□ -1.11
HDAC6-219ENST00000476625 WFDC10BQ8IUB3 73 aa8.11□□□□□ -1.11
HDAC6-219ENST00000476625 TMEM37Q8WXS4 190 aa8.11□□□□□ -1.11
HDAC6-219ENST00000476625 SOSTQ9BQB4 213 aa8.11□□□□□ -1.11
HDAC6-219ENST00000476625 CCDC59Q9P031 241 aaKnown RBP8.11□□□□□ -1.11
HDAC6-219ENST00000476625 FUT9Q9Y231 359 aa8.11□□□□□ -1.11
HDAC6-219ENST00000476625 DNAH8Q96JB1 4490 aa8.11□□□□□ -1.11
HDAC6-219ENST00000476625 M0R3E3 92 aa8.1□□□□□ -1.11
HDAC6-219ENST00000476625 IGLC2P0DOY2 106 aa8.1□□□□□ -1.11
HDAC6-219ENST00000476625 ID3Q02535 119 aa8.1□□□□□ -1.11
HDAC6-219ENST00000476625 C8orf49Q96NF6 230 aa8.1□□□□□ -1.11
HDAC6-219ENST00000476625 C20orf144Q9BQM9 153 aa8.1□□□□□ -1.11
HDAC6-219ENST00000476625 SLC50A1Q9BRV3 221 aa8.1□□□□□ -1.11
HDAC6-219ENST00000476625 NPIPB6E9PJ23 425 aa8.09□□□□□ -1.11
HDAC6-219ENST00000476625 H3BMQ9 156 aa8.09□□□□□ -1.11
HDAC6-219ENST00000476625 EREGO14944 169 aa8.09□□□□□ -1.11
HDAC6-219ENST00000476625 AGPAT2O15120 278 aa8.09□□□□□ -1.11
HDAC6-219ENST00000476625 PAX4O43316 350 aa8.09□□□□□ -1.11
HDAC6-219ENST00000476625 PRAF2O60831 178 aa8.09□□□□□ -1.11
HDAC6-219ENST00000476625 SCGB1D2O95969 90 aa8.09□□□□□ -1.11
HDAC6-219ENST00000476625 IFNA5P01569 189 aa8.09□□□□□ -1.11
HDAC6-219ENST00000476625 DAZ2Q13117 558 aaKnown RBP8.09□□□□□ -1.11
HDAC6-219ENST00000476625 CDPF1Q6NVV7 123 aa8.09□□□□□ -1.11
HDAC6-219ENST00000476625 LYPD5Q6UWN5 251 aa8.09□□□□□ -1.11
HDAC6-219ENST00000476625 TMEM14EPQ6UXP3 125 aa8.09□□□□□ -1.11
HDAC6-219ENST00000476625 MCFD2Q8NI22 146 aa8.09□□□□□ -1.11
HDAC6-219ENST00000476625 SAT2Q96F10 170 aaPredicted RBP8.09□□□□□ -1.11
HDAC6-219ENST00000476625 MGST2Q99735 147 aa8.09□□□□□ -1.11
HDAC6-219ENST00000476625 PTTG2Q9NZH5 202 aa8.09□□□□□ -1.11
HDAC6-219ENST00000476625 FAM30AQ9NZY2 134 aa8.09□□□□□ -1.11
HDAC6-219ENST00000476625 ICOSQ9Y6W8 199 aa8.09□□□□□ -1.11
HDAC6-219ENST00000476625 FABP12A6NFH5 140 aa8.08□□□□□ -1.12
HDAC6-219ENST00000476625 ZNF324O75467 553 aaPredicted RBP8.08□□□□□ -1.12
HDAC6-219ENST00000476625 CXCL2P19875 107 aa8.08□□□□□ -1.12
HDAC6-219ENST00000476625 GCSHP23434 173 aa8.08□□□□□ -1.12
HDAC6-219ENST00000476625 LEPP41159 167 aa8.08□□□□□ -1.12
HDAC6-219ENST00000476625 UBE2MP61081 183 aaKnown RBP8.08□□□□□ -1.12
HDAC6-219ENST00000476625 PYGO2Q9BRQ0 406 aa8.08□□□□□ -1.12
HDAC6-219ENST00000476625 SLIRPQ9GZT3 109 aaKnown RBP8.08□□□□□ -1.12
HDAC6-219ENST00000476625 FLVCR2Q9UPI3 526 aa8.08□□□□□ -1.12
HDAC6-219ENST00000476625 SRRM2Q9UQ35 2752 aaKnown RBP8.08□□□□□ -1.12
HDAC6-219ENST00000476625 C7orf71A4D174 169 aa8.07□□□□□ -1.12
HDAC6-219ENST00000476625 J3QL48 77 aa8.07□□□□□ -1.12
HDAC6-219ENST00000476625 COX7A2P2O60397 106 aa8.07□□□□□ -1.12
HDAC6-219ENST00000476625 SPINK4O60575 86 aa8.07□□□□□ -1.12
HDAC6-219ENST00000476625 SFTA3P0C7M3 94 aa8.07□□□□□ -1.12
HDAC6-219ENST00000476625 S100A7P31151 101 aa8.07□□□□□ -1.12
HDAC6-219ENST00000476625 S100A5P33763 92 aa8.07□□□□□ -1.12
HDAC6-219ENST00000476625 RNASE4P34096 147 aaKnown RBP8.07□□□□□ -1.12
HDAC6-219ENST00000476625 CRYBA4P53673 196 aa8.07□□□□□ -1.12
HDAC6-219ENST00000476625 SELENOTP62341 195 aa8.07□□□□□ -1.12
HDAC6-219ENST00000476625 FHL2Q14192 279 aa8.07□□□□□ -1.12
HDAC6-219ENST00000476625 PYDC2Q56P42 97 aa8.07□□□□□ -1.12
HDAC6-219ENST00000476625 MIC13Q5XKP0 118 aa8.07□□□□□ -1.12
HDAC6-219ENST00000476625 Q6ZSN1 163 aa8.07□□□□□ -1.12
HDAC6-219ENST00000476625 BPIFA4PQ86YQ2 179 aa8.07□□□□□ -1.12
HDAC6-219ENST00000476625 SMIM8Q96KF7 97 aa8.07□□□□□ -1.12
HDAC6-219ENST00000476625 LINC00467Q9BRT7 94 aa8.07□□□□□ -1.12
HDAC6-219ENST00000476625 RBM38Q9H0Z9 239 aaKnown RBP8.07□□□□□ -1.12
HDAC6-219ENST00000476625 NPVFQ9HCQ7 196 aa8.07□□□□□ -1.12
HDAC6-219ENST00000476625 RCL1Q9Y2P8 373 aaKnown RBP8.07□□□□□ -1.12
HDAC6-219ENST00000476625 C9orf170A2RU37 121 aa8.06□□□□□ -1.12
HDAC6-219ENST00000476625 E5RGE8 158 aa8.06□□□□□ -1.12
HDAC6-219ENST00000476625 K7EPK0 472 aa8.06□□□□□ -1.12
HDAC6-219ENST00000476625 GOSR2O14653 212 aa8.06□□□□□ -1.12
HDAC6-219ENST00000476625 C10orf113Q5VZT2 155 aa8.06□□□□□ -1.12
HDAC6-219ENST00000476625 LINC00299Q6ZSB3 139 aa8.06□□□□□ -1.12
HDAC6-219ENST00000476625 TOMM5Q8N4H5 51 aa8.06□□□□□ -1.12
HDAC6-219ENST00000476625 AGPAT4-IT1Q9H0P7 198 aa8.06□□□□□ -1.12
HDAC6-219ENST00000476625 MSRB1Q9NZV6 116 aa8.06□□□□□ -1.12
HDAC6-219ENST00000476625 MGAT4CQ9UBM8 478 aa8.06□□□□□ -1.12
HDAC6-219ENST00000476625 V9GYH0 126 aa8.06□□□□□ -1.12
HDAC6-219ENST00000476625 IGKV2-40A0A087WW87 121 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-219ENST00000476625 LOC100131303A0A0U1RQF7 123 aa8.05□□□□□ -1.12
HDAC6-219ENST00000476625 KLLNB2CW77 178 aa8.05□□□□□ -1.12
HDAC6-219ENST00000476625 IGKV2D-40P01614 121 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-219ENST00000476625 OR4E1P0C645 316 aa8.05□□□□□ -1.12
HDAC6-219ENST00000476625 TCL1AP56279 114 aa8.05□□□□□ -1.12
HDAC6-219ENST00000476625 DMRTA1Q5VZB9 504 aa8.05□□□□□ -1.12
HDAC6-219ENST00000476625 ZNF546Q86UE3 836 aa8.05□□□□□ -1.12
HDAC6-219ENST00000476625 EXOC3-AS1Q8N2X6 119 aa8.05□□□□□ -1.12
HDAC6-219ENST00000476625 EIF4E3Q8N5X7 224 aaKnown RBP8.05□□□□□ -1.12
HDAC6-219ENST00000476625 ST6GAL2Q96JF0 529 aa8.05□□□□□ -1.12
HDAC6-219ENST00000476625 FAM19A4Q96LR4 140 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms