RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 PFDN1O60925 122 aa12.58□□□□□ -0.4
PKD1-208ENST00000472577 CA1P00915 261 aaPredicted RBP12.58□□□□□ -0.4
PKD1-208ENST00000472577 IGKV3-20P01619 116 aa12.58□□□□□ -0.4
PKD1-208ENST00000472577 NBEAP1P0C6P0 100 aa12.58□□□□□ -0.4
PKD1-208ENST00000472577 ZNF705DP0CH99 300 aaPredicted RBP12.58□□□□□ -0.4
PKD1-208ENST00000472577 ZNF705BP0CI00 300 aaPredicted RBP12.58□□□□□ -0.4
PKD1-208ENST00000472577 SPP1P10451 314 aa12.58□□□□□ -0.4
PKD1-208ENST00000472577 CDC34P49427 236 aaPredicted RBP12.58□□□□□ -0.4
PKD1-208ENST00000472577 PDE6HQ13956 83 aa12.58□□□□□ -0.4
PKD1-208ENST00000472577 MORN3Q6PF18 240 aaPredicted RBP12.58□□□□□ -0.4
PKD1-208ENST00000472577 Q6ZWC4 215 aa12.58□□□□□ -0.4
PKD1-208ENST00000472577 RPUSD4Q96CM3 377 aaKnown RBP12.58□□□□□ -0.4
PKD1-208ENST00000472577 OVOL2Q9BRP0 275 aa12.58□□□□□ -0.4
PKD1-208ENST00000472577 UBE2L3P68036 154 aaKnown RBP12.57□□□□□ -0.4
PKD1-208ENST00000472577 SSX7Q7RTT5 188 aa12.57□□□□□ -0.4
PKD1-208ENST00000472577 OR4B1Q8NGF8 309 aa12.57□□□□□ -0.4
PKD1-208ENST00000472577 RAB24Q969Q5 203 aa12.57□□□□□ -0.4
PKD1-208ENST00000472577 PHYHIPLQ96FC7 376 aa12.57□□□□□ -0.4
PKD1-208ENST00000472577 CLUHP3Q96NS8 147 aa12.57□□□□□ -0.4
PKD1-208ENST00000472577 A8MTW9 85 aa12.56□□□□□ -0.4
PKD1-208ENST00000472577 PRAC2D3DTV9 90 aa12.56□□□□□ -0.4
PKD1-208ENST00000472577 STAG3L2P0CL84 134 aa12.56□□□□□ -0.4
PKD1-208ENST00000472577 STAG3L3P0CL85 134 aa12.56□□□□□ -0.4
PKD1-208ENST00000472577 CNN1P51911 297 aaKnown RBP12.56□□□□□ -0.4
PKD1-208ENST00000472577 ZNF726P1Q15940 193 aa12.56□□□□□ -0.4
PKD1-208ENST00000472577 PQLC2Q6ZP29 291 aa12.56□□□□□ -0.4
PKD1-208ENST00000472577 EXOC3-AS1Q8N2X6 119 aa12.56□□□□□ -0.4
PKD1-208ENST00000472577 OR8A1Q8NGG7 326 aa12.56□□□□□ -0.4
PKD1-208ENST00000472577 RNF183Q96D59 192 aa12.56□□□□□ -0.4
PKD1-208ENST00000472577 ACTR3CQ9C0K3 210 aaPredicted RBP12.56□□□□□ -0.4
PKD1-208ENST00000472577 CLEC5AQ9NY25 188 aa12.56□□□□□ -0.4
PKD1-208ENST00000472577 PLA2G2EQ9NZK7 142 aa12.56□□□□□ -0.4
PKD1-208ENST00000472577 M0R3E3 92 aa12.55□□□□□ -0.4
PKD1-208ENST00000472577 SPRY2O43597 315 aa12.55□□□□□ -0.4
PKD1-208ENST00000472577 ARL14EPLP0DKL9 152 aa12.55□□□□□ -0.4
PKD1-208ENST00000472577 FXYD7P58549 80 aa12.55□□□□□ -0.4
PKD1-208ENST00000472577 PSG9Q00887 426 aa12.55□□□□□ -0.4
PKD1-208ENST00000472577 ZFP69Q49AA0 526 aa12.55□□□□□ -0.4
PKD1-208ENST00000472577 AKR1C8PQ5T2L2 129 aa12.55□□□□□ -0.4
PKD1-208ENST00000472577 TP53TG1Q9Y2A0 90 aa12.55□□□□□ -0.4
PKD1-208ENST00000472577 DUSP14O95147 198 aaKnown RBP12.54□□□□□ -0.4
PKD1-208ENST00000472577 SEC11BP0C7V7 166 aa12.54□□□□□ -0.4
PKD1-208ENST00000472577 HIST1H1AQ02539 215 aaPredicted RBP12.54□□□□□ -0.4
PKD1-208ENST00000472577 ICAM4Q14773 271 aa12.54□□□□□ -0.4
PKD1-208ENST00000472577 AMTNQ6UX39 209 aa12.54□□□□□ -0.4
PKD1-208ENST00000472577 BAP18Q8IXM2 172 aa12.54□□□□□ -0.4
PKD1-208ENST00000472577 C9orf62Q8N4C0 152 aa12.54□□□□□ -0.4
PKD1-208ENST00000472577 MRPL53Q96EL3 112 aaKnown RBP12.54□□□□□ -0.4
PKD1-208ENST00000472577 SLC35B3Q9H1N7 401 aa12.54□□□□□ -0.4
PKD1-208ENST00000472577 HYDINQ4G0P3 5121 aa12.54□□□□□ -0.4
PKD1-208ENST00000472577 TPT1P13693 172 aaKnown RBP12.53□□□□□ -0.4
PKD1-208ENST00000472577 NUTF2P61970 127 aaKnown RBP12.53□□□□□ -0.4
PKD1-208ENST00000472577 RANP62826 216 aaKnown RBP12.53□□□□□ -0.4
PKD1-208ENST00000472577 EIF5AP63241 154 aaKnown RBP12.53□□□□□ -0.4
PKD1-208ENST00000472577 CSNK1G2-AS1Q8NCQ2 148 aa12.53□□□□□ -0.4
PKD1-208ENST00000472577 STOML3Q8TAV4 291 aa12.53□□□□□ -0.4
PKD1-208ENST00000472577 AAMDCQ9H7C9 122 aa12.53□□□□□ -0.4
PKD1-208ENST00000472577 XCL2Q9UBD3 114 aa12.53□□□□□ -0.4
PKD1-208ENST00000472577 PRELID1Q9Y255 219 aa12.53□□□□□ -0.4
PKD1-208ENST00000472577 CTXND1A0A1B0GTU2 59 aa12.52□□□□□ -0.41
PKD1-208ENST00000472577 GCHFRP30047 84 aa12.52□□□□□ -0.41
PKD1-208ENST00000472577 Q9H3A6 140 aa12.52□□□□□ -0.41
PKD1-208ENST00000472577 FHITP49789 147 aa12.51□□□□□ -0.41
PKD1-208ENST00000472577 LYPD1Q8N2G4 141 aa12.51□□□□□ -0.41
PKD1-208ENST00000472577 SUN5Q8TC36 379 aa12.51□□□□□ -0.41
PKD1-208ENST00000472577 TMED6Q8WW62 240 aa12.51□□□□□ -0.41
PKD1-208ENST00000472577 CXorf1O96002 111 aa12.5□□□□□ -0.41
PKD1-208ENST00000472577 NKX2-5P52952 324 aaPredicted RBP12.5□□□□□ -0.41
PKD1-208ENST00000472577 OR10J6PQ8NGY7 276 aa12.5□□□□□ -0.41
PKD1-208ENST00000472577 C1QTNF4Q9BXJ3 329 aa12.5□□□□□ -0.41
PKD1-208ENST00000472577 NPIPB6E9PJ23 425 aa12.49□□□□□ -0.41
PKD1-208ENST00000472577 M0R2Z0 102 aa12.49□□□□□ -0.41
PKD1-208ENST00000472577 FGF8P55075 233 aaPredicted RBP12.49□□□□□ -0.41
PKD1-208ENST00000472577 SPINK13Q1W4C9 94 aa12.49□□□□□ -0.41
PKD1-208ENST00000472577 SLC51BQ86UW2 128 aa12.49□□□□□ -0.41
PKD1-208ENST00000472577 OR11H2Q8NH07 326 aa12.49□□□□□ -0.41
PKD1-208ENST00000472577 RARRES2Q99969 163 aa12.49□□□□□ -0.41
PKD1-208ENST00000472577 OTORQ9NRC9 128 aa12.49□□□□□ -0.41
PKD1-208ENST00000472577 IGKV2-40A0A087WW87 121 aaPredicted RBP12.48□□□□□ -0.41
PKD1-208ENST00000472577 MAP1LC3B2A6NCE7 125 aa12.48□□□□□ -0.41
PKD1-208ENST00000472577 UMAD1C9J7I0 102 aa12.48□□□□□ -0.41
PKD1-208ENST00000472577 BOLA2-SMG1P6H3BVE0 249 aa12.48□□□□□ -0.41
PKD1-208ENST00000472577 IGKV2D-40P01614 121 aaPredicted RBP12.48□□□□□ -0.41
PKD1-208ENST00000472577 ERCC8Q13216 396 aa12.48□□□□□ -0.41
PKD1-208ENST00000472577 MAP1LC3BQ9GZQ8 125 aa12.48□□□□□ -0.41
PKD1-208ENST00000472577 TMPRSS5Q9H3S3 457 aa12.48□□□□□ -0.41
PKD1-208ENST00000472577 TMEM167BQ9NRX6 74 aa12.48□□□□□ -0.41
PKD1-208ENST00000472577 PGPA6NDG6 321 aa12.47□□□□□ -0.41
PKD1-208ENST00000472577 CRXO43186 299 aaPredicted RBP12.47□□□□□ -0.41
PKD1-208ENST00000472577 CT45A10P0DMU9 189 aa12.47□□□□□ -0.41
PKD1-208ENST00000472577 IQCF2Q8IXL9 164 aa12.47□□□□□ -0.41
PKD1-208ENST00000472577 FAM213BQ8TBF2 198 aa12.47□□□□□ -0.41
PKD1-208ENST00000472577 PPP1R14DQ9NXH3 145 aa12.47□□□□□ -0.41
PKD1-208ENST00000472577 X6R8D5 127 aa12.47□□□□□ -0.41
PKD1-208ENST00000472577 ZNF705EA8MWA4 302 aaPredicted RBP12.46□□□□□ -0.41
PKD1-208ENST00000472577 C1orf158Q8N1D5 194 aa12.46□□□□□ -0.41
PKD1-208ENST00000472577 VGLL1Q99990 258 aa12.46□□□□□ -0.41
PKD1-208ENST00000472577 AGPAT4-IT1Q9H0P7 198 aa12.46□□□□□ -0.41
PKD1-208ENST00000472577 TRAV12-2A0A075B6T6 113 aa12.45□□□□□ -0.42
PKD1-208ENST00000472577 DIRC3C9JPN6 131 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms