RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 A0A1W2PS18 150 aa9.98□□□□□ -0.81
HMGN1-211ENST00000471260 PCP4L1A6NKN8 68 aa9.98□□□□□ -0.81
HMGN1-211ENST00000471260 PPP1R2P9O14990 202 aa9.98□□□□□ -0.81
HMGN1-211ENST00000471260 CXCL1P09341 107 aa9.98□□□□□ -0.81
HMGN1-211ENST00000471260 FGF8P55075 233 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-211ENST00000471260 C2orf83Q53S99 150 aa9.98□□□□□ -0.81
HMGN1-211ENST00000471260 TCF24Q7RTU0 167 aa9.98□□□□□ -0.81
HMGN1-211ENST00000471260 RNASEH2CQ8TDP1 164 aaKnown RBP9.98□□□□□ -0.81
HMGN1-211ENST00000471260 RNF183Q96D59 192 aa9.98□□□□□ -0.81
HMGN1-211ENST00000471260 IMMP2LQ96T52 175 aa9.98□□□□□ -0.81
HMGN1-211ENST00000471260 PARLQ9H300 379 aa9.98□□□□□ -0.81
HMGN1-211ENST00000471260 FNDC4Q9H6D8 234 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-211ENST00000471260 HEYLQ9NQ87 328 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-211ENST00000471260 IGHV3-49A0A0A0MS15 119 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 PRSS46E5RG02 174 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 H7BYZ3 331 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 HIST1H2BKO60814 126 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 TYMSP04818 313 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 HIST1H2BJP06899 126 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 FABP1P07148 127 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 HIST1H2BOP23527 126 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 NPPCP23582 126 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 HIST1H2BBP33778 126 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 FAM3BP58499 235 aaPredicted RBP9.97□□□□□ -0.81
HMGN1-211ENST00000471260 HIST1H2BDP58876 126 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 HIST1H2BCP62807 126 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 HIST2H2BEQ16778 126 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.97□□□□□ -0.81
HMGN1-211ENST00000471260 HIST1H2BHQ93079 126 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 RAB24Q969Q5 203 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 METTL26Q96S19 204 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 HIST1H2BNQ99877 126 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 HIST1H2BMQ99879 126 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 DOK5Q9P104 306 aa9.97□□□□□ -0.81
HMGN1-211ENST00000471260 TGIF2-C20orf24A0A0A6YYL0 155 aa9.96□□□□□ -0.82
HMGN1-211ENST00000471260 CRYBB3P26998 211 aa9.96□□□□□ -0.82
HMGN1-211ENST00000471260 TFPI2P48307 235 aa9.96□□□□□ -0.82
HMGN1-211ENST00000471260 RPL23P62829 140 aaKnown RBP9.96□□□□□ -0.82
HMGN1-211ENST00000471260 RAB31Q13636 194 aa9.96□□□□□ -0.82
HMGN1-211ENST00000471260 ADIRFQ15847 76 aa9.96□□□□□ -0.82
HMGN1-211ENST00000471260 MLANAQ16655 118 aa9.96□□□□□ -0.82
HMGN1-211ENST00000471260 DEFB135Q30KP9 77 aa9.96□□□□□ -0.82
HMGN1-211ENST00000471260 ETFRF1Q6IPR1 90 aa9.96□□□□□ -0.82
HMGN1-211ENST00000471260 KCNIP4Q6PIL6 250 aa9.96□□□□□ -0.82
HMGN1-211ENST00000471260 APRG1Q8IVJ8 170 aa9.96□□□□□ -0.82
HMGN1-211ENST00000471260 SLC24A4Q8NFF2 622 aa9.96□□□□□ -0.82
HMGN1-211ENST00000471260 CSTL1Q9H114 145 aa9.96□□□□□ -0.82
HMGN1-211ENST00000471260 MS4A6AQ9H2W1 248 aa9.96□□□□□ -0.82
HMGN1-211ENST00000471260 SACSQ9NZJ4 4579 aa9.95□□□□□ -0.82
HMGN1-211ENST00000471260 IGKV3-7A0A075B6H7 116 aa9.95□□□□□ -0.82
HMGN1-211ENST00000471260 TRAV9-1A0A075B6T8 112 aa9.95□□□□□ -0.82
HMGN1-211ENST00000471260 IGHV3OR16-13A0A075B7E8 117 aa9.95□□□□□ -0.82
HMGN1-211ENST00000471260 IGHV3-74A0A0B4J1X5 117 aa9.95□□□□□ -0.82
HMGN1-211ENST00000471260 CXorf1O96002 111 aa9.95□□□□□ -0.82
HMGN1-211ENST00000471260 IGKV1-17P01599 117 aa9.95□□□□□ -0.82
HMGN1-211ENST00000471260 APOHP02749 345 aaPredicted RBP9.95□□□□□ -0.82
HMGN1-211ENST00000471260 PFN1P07737 140 aaKnown RBP9.95□□□□□ -0.82
HMGN1-211ENST00000471260 RPL35AP18077 110 aaKnown RBP9.95□□□□□ -0.82
HMGN1-211ENST00000471260 YPEL3P61236 119 aaPredicted RBP9.95□□□□□ -0.82
HMGN1-211ENST00000471260 COA6Q5JTJ3 125 aaKnown RBP9.95□□□□□ -0.82
HMGN1-211ENST00000471260 GBGT1Q8N5D6 347 aa9.95□□□□□ -0.82
HMGN1-211ENST00000471260 GATAD1Q8WUU5 269 aa9.95□□□□□ -0.82
HMGN1-211ENST00000471260 ACY3Q96HD9 319 aa9.95□□□□□ -0.82
HMGN1-211ENST00000471260 NIT2Q9NQR4 276 aa9.95□□□□□ -0.82
HMGN1-211ENST00000471260 MRPL36Q9P0J6 103 aaKnown RBP9.95□□□□□ -0.82
HMGN1-211ENST00000471260 A0A0J9YWU9 116 aa9.94□□□□□ -0.82
HMGN1-211ENST00000471260 A0A1W2PPV4 95 aa9.94□□□□□ -0.82
HMGN1-211ENST00000471260 C11orf94C9JXX5 98 aa9.94□□□□□ -0.82
HMGN1-211ENST00000471260 PHOX2AO14813 284 aa9.94□□□□□ -0.82
HMGN1-211ENST00000471260 IFNA10P01566 189 aa9.94□□□□□ -0.82
HMGN1-211ENST00000471260 IGLC1P0CG04 106 aa9.94□□□□□ -0.82
HMGN1-211ENST00000471260 STAG3L2P0CL84 134 aa9.94□□□□□ -0.82
HMGN1-211ENST00000471260 STAG3L3P0CL85 134 aa9.94□□□□□ -0.82
HMGN1-211ENST00000471260 NPY1RP25929 384 aa9.94□□□□□ -0.82
HMGN1-211ENST00000471260 RPL11P62913 178 aaKnown RBP9.94□□□□□ -0.82
HMGN1-211ENST00000471260 HIST3H2BBQ8N257 126 aa9.94□□□□□ -0.82
HMGN1-211ENST00000471260 GRAMD2BQ96HH9 432 aa9.94□□□□□ -0.82
HMGN1-211ENST00000471260 NPVFQ9HCQ7 196 aa9.94□□□□□ -0.82
HMGN1-211ENST00000471260 LY96Q9Y6Y9 160 aa9.94□□□□□ -0.82
HMGN1-211ENST00000471260 URGCP-MRPS24S4R325 110 aa9.94□□□□□ -0.82
HMGN1-211ENST00000471260 RYR2Q92736 4967 aa9.94□□□□□ -0.82
HMGN1-211ENST00000471260 TRGC2P03986 189 aa9.93□□□□□ -0.82
HMGN1-211ENST00000471260 GALR1P47211 349 aa9.93□□□□□ -0.82
HMGN1-211ENST00000471260 RPL29P47914 159 aaKnown RBP9.93□□□□□ -0.82
HMGN1-211ENST00000471260 NDUFA6P56556 154 aa9.93□□□□□ -0.82
HMGN1-211ENST00000471260 TIGITQ495A1 244 aa9.93□□□□□ -0.82
HMGN1-211ENST00000471260 OR51G1Q8NGK1 321 aa9.93□□□□□ -0.82
HMGN1-211ENST00000471260 RPUSD4Q96CM3 377 aaKnown RBP9.93□□□□□ -0.82
HMGN1-211ENST00000471260 GSN-AS1Q9NRJ2 163 aa9.93□□□□□ -0.82
HMGN1-211ENST00000471260 NUPR2A6NF83 97 aa9.92□□□□□ -0.82
HMGN1-211ENST00000471260 PAGE4O60829 102 aa9.92□□□□□ -0.82
HMGN1-211ENST00000471260 TRGC1P0CF51 173 aa9.92□□□□□ -0.82
HMGN1-211ENST00000471260 OR10J1P30954 320 aa9.92□□□□□ -0.82
HMGN1-211ENST00000471260 RHOBP62745 196 aa9.92□□□□□ -0.82
HMGN1-211ENST00000471260 ZNF124Q15973 351 aa9.92□□□□□ -0.82
HMGN1-211ENST00000471260 TEPPQ6URK8 271 aa9.92□□□□□ -0.82
HMGN1-211ENST00000471260 TMEM183AQ8IXX5 376 aa9.92□□□□□ -0.82
HMGN1-211ENST00000471260 C11orf52Q96A22 123 aa9.92□□□□□ -0.82
HMGN1-211ENST00000471260 SLC35E1Q96K37 410 aa9.92□□□□□ -0.82
HMGN1-211ENST00000471260 RABAC1Q9UI14 185 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms