RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 ZBTB8BQ8NAP8 495 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC12-216ENST00000469400 TMEM70Q9BUB7 260 aa8.67□□□□□ -1.02
TRAPPC12-216ENST00000469400 ARL6Q9H0F7 186 aa8.67□□□□□ -1.02
TRAPPC12-216ENST00000469400 LY96Q9Y6Y9 160 aa8.67□□□□□ -1.02
TRAPPC12-216ENST00000469400 KRTAP29-1A8MX34 341 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC12-216ENST00000469400 H3BTX0 84 aa8.66□□□□□ -1.02
TRAPPC12-216ENST00000469400 SLC17A3O00476 420 aa8.66□□□□□ -1.02
TRAPPC12-216ENST00000469400 ZNF680Q8NEM1 530 aa8.66□□□□□ -1.02
TRAPPC12-216ENST00000469400 ODF3Q96PU9 254 aa8.66□□□□□ -1.02
TRAPPC12-216ENST00000469400 LINC00467Q9BRT7 94 aa8.66□□□□□ -1.02
TRAPPC12-216ENST00000469400 RBM38Q9H0Z9 239 aaKnown RBP8.66□□□□□ -1.02
TRAPPC12-216ENST00000469400 RABL2BQ9UNT1 228 aa8.66□□□□□ -1.02
TRAPPC12-216ENST00000469400 RNF24Q9Y225 148 aa8.66□□□□□ -1.02
TRAPPC12-216ENST00000469400 HMCN2Q8NDA2 5059 aa8.66□□□□□ -1.02
TRAPPC12-216ENST00000469400 IGLV5-52A0A0A0MRZ9 124 aa8.65□□□□□ -1.02
TRAPPC12-216ENST00000469400 IGHV3-53P01767 116 aa8.65□□□□□ -1.02
TRAPPC12-216ENST00000469400 VAMP1P23763 118 aa8.65□□□□□ -1.02
TRAPPC12-216ENST00000469400 TMEM128Q5BJH2 165 aa8.65□□□□□ -1.02
TRAPPC12-216ENST00000469400 TEPPQ6URK8 271 aa8.65□□□□□ -1.02
TRAPPC12-216ENST00000469400 LINC00305Q7Z4B0 112 aa8.65□□□□□ -1.02
TRAPPC12-216ENST00000469400 DIRAS2Q96HU8 199 aa8.65□□□□□ -1.02
TRAPPC12-216ENST00000469400 ST6GAL2Q96JF0 529 aa8.65□□□□□ -1.02
TRAPPC12-216ENST00000469400 PRO0255Q9UI72 69 aa8.65□□□□□ -1.02
TRAPPC12-216ENST00000469400 KLF12Q9Y4X4 402 aa8.65□□□□□ -1.02
TRAPPC12-216ENST00000469400 NPIPB6E9PJ23 425 aa8.64□□□□□ -1.03
TRAPPC12-216ENST00000469400 K7EP13 123 aa8.64□□□□□ -1.03
TRAPPC12-216ENST00000469400 K7EPK0 472 aa8.64□□□□□ -1.03
TRAPPC12-216ENST00000469400 SPINK4O60575 86 aa8.64□□□□□ -1.03
TRAPPC12-216ENST00000469400 HOXB5P09067 269 aa8.64□□□□□ -1.03
TRAPPC12-216ENST00000469400 CRYBA4P53673 196 aa8.64□□□□□ -1.03
TRAPPC12-216ENST00000469400 RRAS2P62070 204 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC12-216ENST00000469400 SLC38A11Q08AI6 406 aa8.64□□□□□ -1.03
TRAPPC12-216ENST00000469400 MRPL23Q16540 153 aaKnown RBP8.64□□□□□ -1.03
TRAPPC12-216ENST00000469400 NEGR1Q7Z3B1 354 aa8.64□□□□□ -1.03
TRAPPC12-216ENST00000469400 BPIFA4PQ86YQ2 179 aa8.64□□□□□ -1.03
TRAPPC12-216ENST00000469400 BCL7BQ9BQE9 202 aa8.64□□□□□ -1.03
TRAPPC12-216ENST00000469400 FAM30AQ9NZY2 134 aa8.64□□□□□ -1.03
TRAPPC12-216ENST00000469400 RABL2AQ9UBK7 228 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC12-216ENST00000469400 C7orf71A4D174 169 aa8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 H3BQ15 152 aa8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 PRAF2O60831 178 aa8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 CCNKO75909 580 aa8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 SLC25A5P05141 298 aaKnown RBP8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 EVI2AP22794 236 aa8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 POLR2GP62487 172 aaKnown RBP eCLIP8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 ANXA2RQ3ZCQ2 193 aa8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 C4orf46Q504U0 113 aa8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 SERTAD4-AS1Q5TG53 156 aa8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 PXDC1Q5TGL8 231 aa8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 MORN5Q5VZ52 161 aa8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 WFDC10BQ8IUB3 73 aa8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 NTN5Q8WTR8 489 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 SAT2Q96F10 170 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 C8orf49Q96NF6 230 aa8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 PSENENQ9NZ42 101 aa8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 HHLA3Q9XRX5 114 aa8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 PXMP4Q9Y6I8 212 aa8.63□□□□□ -1.03
TRAPPC12-216ENST00000469400 LRCOL1A6NCL2 159 aa8.62□□□□□ -1.03
TRAPPC12-216ENST00000469400 SFT2D2O95562 160 aa8.62□□□□□ -1.03
TRAPPC12-216ENST00000469400 IGLC2P0DOY2 106 aa8.62□□□□□ -1.03
TRAPPC12-216ENST00000469400 TMBIM6P55061 237 aa8.62□□□□□ -1.03
TRAPPC12-216ENST00000469400 TCL1AP56279 114 aa8.62□□□□□ -1.03
TRAPPC12-216ENST00000469400 ID3Q02535 119 aa8.62□□□□□ -1.03
TRAPPC12-216ENST00000469400 SLAQ13239 276 aa8.62□□□□□ -1.03
TRAPPC12-216ENST00000469400 FHL2Q14192 279 aa8.62□□□□□ -1.03
TRAPPC12-216ENST00000469400 EIF4E3Q8N5X7 224 aaKnown RBP8.62□□□□□ -1.03
TRAPPC12-216ENST00000469400 RAB2BQ8WUD1 216 aa8.62□□□□□ -1.03
TRAPPC12-216ENST00000469400 TMEM37Q8WXS4 190 aa8.62□□□□□ -1.03
TRAPPC12-216ENST00000469400 NPVFQ9HCQ7 196 aa8.62□□□□□ -1.03
TRAPPC12-216ENST00000469400 RSL24D1Q9UHA3 163 aaKnown RBP8.62□□□□□ -1.03
TRAPPC12-216ENST00000469400 DNAH8Q96JB1 4490 aa8.62□□□□□ -1.03
TRAPPC12-216ENST00000469400 FNDC10F2Z333 226 aa8.61□□□□□ -1.03
TRAPPC12-216ENST00000469400 GOSR2O14653 212 aa8.61□□□□□ -1.03
TRAPPC12-216ENST00000469400 PLA2G1BP04054 148 aaKnown RBP8.61□□□□□ -1.03
TRAPPC12-216ENST00000469400 CD300CQ08708 224 aa8.61□□□□□ -1.03
TRAPPC12-216ENST00000469400 BTN1A1Q13410 526 aa8.61□□□□□ -1.03
TRAPPC12-216ENST00000469400 PPP1R1AQ13522 171 aa8.61□□□□□ -1.03
TRAPPC12-216ENST00000469400 OPCMLQ14982 345 aa8.61□□□□□ -1.03
TRAPPC12-216ENST00000469400 MRPL16Q9NX20 251 aaKnown RBP8.61□□□□□ -1.03
TRAPPC12-216ENST00000469400 CCDC59Q9P031 241 aaKnown RBP8.61□□□□□ -1.03
TRAPPC12-216ENST00000469400 KLLNB2CW77 178 aa8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 E5RGE8 158 aa8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 K7EQD1 137 aa8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 COX7A2P2O60397 106 aa8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 NOL3O60936 208 aaKnown RBP8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 CRYGDP07320 174 aa8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 METTL15P1P0C7V9 234 aa8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 SRIP30626 198 aa8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 RNASE4P34096 147 aaKnown RBP8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 ERCC8Q13216 396 aa8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 SPCS2Q15005 226 aa8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 IBA57Q5T440 356 aaKnown RBP8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 TMEM14EPQ6UXP3 125 aa8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 ZNF546Q86UE3 836 aa8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 SYT8Q8NBV8 401 aa8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 DEFB104AQ8WTQ1 72 aa8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 SMIM8Q96KF7 97 aa8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 VGLL1Q99990 258 aa8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 MRPL32Q9BYC8 188 aaKnown RBP8.6□□□□□ -1.03
TRAPPC12-216ENST00000469400 TP53TG3Q9ULZ0 132 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms