RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 MGAT4CQ9UBM8 478 aa5.04□□□□□ -1.6
SND1-205ENST00000467238 PCP4L1A6NKN8 68 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 PRSS46E5RG02 174 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 SMLR1H3BR10 107 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 MED6O75586 246 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 IGKV3-20P01619 116 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 FABP1P07148 127 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 PVALBP20472 110 aaPredicted RBP5.03□□□□□ -1.6
SND1-205ENST00000467238 BTCP35070 178 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 ID1P41134 155 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 PAX9P55771 341 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 FXYD7P58549 80 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 RAB5BP61020 215 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 POLR2GP62487 172 aaKnown RBP eCLIP5.03□□□□□ -1.6
SND1-205ENST00000467238 OR2F1Q13607 317 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 ZNF345Q14585 488 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 RNF212Q495C1 297 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 TMUB2Q71RG4 321 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 STX12Q86Y82 276 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 C12orf45Q8N5I9 185 aaPredicted RBP5.03□□□□□ -1.6
SND1-205ENST00000467238 OR11H4Q8NGC9 324 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 COQ8AQ8NI60 647 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 SLC25A21Q9BQT8 299 aaPredicted RBP5.03□□□□□ -1.6
SND1-205ENST00000467238 TMED3Q9Y3Q3 217 aa5.03□□□□□ -1.6
SND1-205ENST00000467238 TMEM189A5PLL7 270 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 SMIM9A6NGZ8 99 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 F6UB75 175 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 ISLRO14498 428 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 SFT2D2O95562 160 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 CFDP00746 253 aaPredicted RBP5.02□□□□□ -1.61
SND1-205ENST00000467238 APOC3P02656 99 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 CXCL3P19876 107 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 AKR1D1P51857 326 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 EIF5AP63241 154 aaKnown RBP5.02□□□□□ -1.61
SND1-205ENST00000467238 PPP1R1AQ13522 171 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 SAMD13Q5VXD3 122 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 SPATA31B1PQ5VZV4 182 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 OR8I2Q8N0Y5 310 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 POM121L12Q8N7R1 296 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 OR4B1Q8NGF8 309 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 C17orf77Q96MU5 243 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 CIB3Q96Q77 187 aaPredicted RBP5.02□□□□□ -1.61
SND1-205ENST00000467238 NDUFAF3Q9BU61 184 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 ARL6Q9H0F7 186 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 SLC35B3Q9H1N7 401 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 DKK2Q9UBU2 259 aa5.02□□□□□ -1.61
SND1-205ENST00000467238 IGHV3OR16-12A0A075B7B8 117 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 A0A0J9YX75 114 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 KANTRA0A1W2PQU2 76 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 TMEM218A2RU14 115 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 A8MTW9 85 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 SYNGR2O43760 224 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 NDUFB6O95139 128 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 HOXB5P09067 269 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 SPART-AS1P0CW21 52 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 P0DMU3 169 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 FAM231AP0DMU4 169 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 FAM231CP0DMU5 169 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 GATA2P23769 480 aaPredicted RBP5.01□□□□□ -1.61
SND1-205ENST00000467238 GALR1P47211 349 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 EMP1P54849 157 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 RPP30P78346 268 aaKnown RBP5.01□□□□□ -1.61
SND1-205ENST00000467238 PSG9Q00887 426 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 FAM78BQ5VT40 261 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 GGNBP1Q5YKI7 109 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 EIF5AL1Q6IS14 154 aaKnown RBP5.01□□□□□ -1.61
SND1-205ENST00000467238 EBLN2Q6P2I7 272 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 TMEM182Q6ZP80 229 aaPredicted RBP5.01□□□□□ -1.61
SND1-205ENST00000467238 LINC00336Q6ZUF6 198 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 ACOT7LQ6ZUV0 252 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 C1orf158Q8N1D5 194 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 OR4D5Q8NGN0 318 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 MAGT1Q9H0U3 335 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 CARHSP1Q9Y2V2 147 aaKnown RBP5.01□□□□□ -1.61
SND1-205ENST00000467238 GOLT1BQ9Y3E0 138 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 RFNGQ9Y644 331 aa5.01□□□□□ -1.61
SND1-205ENST00000467238 TEX48A0A1B0GUV7 120 aa5□□□□□ -1.61
SND1-205ENST00000467238 A0A1B0GVY2 172 aa5□□□□□ -1.61
SND1-205ENST00000467238 H3BP45 60 aa5□□□□□ -1.61
SND1-205ENST00000467238 HBE1P02100 147 aa5□□□□□ -1.61
SND1-205ENST00000467238 RAB4BP61018 213 aa5□□□□□ -1.61
SND1-205ENST00000467238 UBE2MP61081 183 aaKnown RBP5□□□□□ -1.61
SND1-205ENST00000467238 LBHQ53QV2 105 aaPredicted RBP5□□□□□ -1.61
SND1-205ENST00000467238 SPANXN5Q5MJ07 72 aa5□□□□□ -1.61
SND1-205ENST00000467238 DNLZQ5SXM8 178 aa5□□□□□ -1.61
SND1-205ENST00000467238 C10orf91Q5T1B1 145 aa5□□□□□ -1.61
SND1-205ENST00000467238 FAM222AQ5U5X8 452 aa5□□□□□ -1.61
SND1-205ENST00000467238 AMTNQ6UX39 209 aa5□□□□□ -1.61
SND1-205ENST00000467238 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5□□□□□ -1.61
SND1-205ENST00000467238 C15orf54Q8N8G6 183 aa5□□□□□ -1.61
SND1-205ENST00000467238 BPIFCQ8NFQ6 507 aa5□□□□□ -1.61
SND1-205ENST00000467238 OR1B1Q8NGR6 318 aa5□□□□□ -1.61
SND1-205ENST00000467238 FAM210BQ96KR6 192 aa5□□□□□ -1.61
SND1-205ENST00000467238 GPR82Q96P67 336 aa5□□□□□ -1.61
SND1-205ENST00000467238 NIPSNAP3BQ9BS92 247 aa5□□□□□ -1.61
SND1-205ENST00000467238 RSG1Q9BU20 258 aa5□□□□□ -1.61
SND1-205ENST00000467238 SEC11CQ9BY50 192 aa5□□□□□ -1.61
SND1-205ENST00000467238 OR51M1Q9H341 326 aa5□□□□□ -1.61
SND1-205ENST00000467238 SLC25A22Q9H936 323 aa5□□□□□ -1.61
SND1-205ENST00000467238 RPRMQ9NS64 109 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms