RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 TENM2Q9NT68 2774 aa8.75□□□□□ -1.01
SHROOM3-202ENST00000466541 J3KRW8 73 aa8.74□□□□□ -1.01
SHROOM3-202ENST00000466541 CSNK1G2-AS1Q8NCQ2 148 aa8.74□□□□□ -1.01
SHROOM3-202ENST00000466541 GNPNAT1Q96EK6 184 aaPredicted RBP8.74□□□□□ -1.01
SHROOM3-202ENST00000466541 ZNF503Q96F45 646 aa8.74□□□□□ -1.01
SHROOM3-202ENST00000466541 PHYHIPLQ96FC7 376 aa8.74□□□□□ -1.01
SHROOM3-202ENST00000466541 ARPC5LQ9BPX5 153 aa8.74□□□□□ -1.01
SHROOM3-202ENST00000466541 PSMG3Q9BT73 122 aaPredicted RBP8.74□□□□□ -1.01
SHROOM3-202ENST00000466541 TMEM208Q9BTX3 173 aa8.74□□□□□ -1.01
SHROOM3-202ENST00000466541 DNAH7Q8WXX0 4024 aa8.74□□□□□ -1.01
SHROOM3-202ENST00000466541 IGHV4-28A0A0C4DH34 117 aa8.73□□□□□ -1.01
SHROOM3-202ENST00000466541 CXorf65A6NEN9 183 aa8.73□□□□□ -1.01
SHROOM3-202ENST00000466541 C3orf84H3BNL1 204 aa8.73□□□□□ -1.01
SHROOM3-202ENST00000466541 TAAR5O14804 337 aa8.73□□□□□ -1.01
SHROOM3-202ENST00000466541 MBP02144 154 aa8.73□□□□□ -1.01
SHROOM3-202ENST00000466541 CDC34P49427 236 aaPredicted RBP8.73□□□□□ -1.01
SHROOM3-202ENST00000466541 EMP1P54849 157 aa8.73□□□□□ -1.01
SHROOM3-202ENST00000466541 ERCC8Q13216 396 aa8.73□□□□□ -1.01
SHROOM3-202ENST00000466541 AMTNQ6UX39 209 aa8.73□□□□□ -1.01
SHROOM3-202ENST00000466541 IQCF2Q8IXL9 164 aa8.73□□□□□ -1.01
SHROOM3-202ENST00000466541 BAP18Q8IXM2 172 aa8.73□□□□□ -1.01
SHROOM3-202ENST00000466541 ST6GAL2Q96JF0 529 aa8.73□□□□□ -1.01
SHROOM3-202ENST00000466541 HYLS1Q96M11 299 aa8.73□□□□□ -1.01
SHROOM3-202ENST00000466541 CYTL1Q9NRR1 136 aa8.73□□□□□ -1.01
SHROOM3-202ENST00000466541 GOLT1BQ9Y3E0 138 aa8.73□□□□□ -1.01
SHROOM3-202ENST00000466541 X6R8D5 127 aa8.73□□□□□ -1.01
SHROOM3-202ENST00000466541 KANTRA0A1W2PQU2 76 aa8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 BOLA2-SMG1P6H3BVE0 249 aa8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 PFDN1O60925 122 aa8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 ZNF253O75346 499 aa8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 JTBO76095 146 aa8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 RBMY1A1P0DJD3 496 aaKnown RBP8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 RBMY1CP0DJD4 496 aa8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 ARL14EPLP0DKL9 152 aa8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 SERF2P84101 59 aa8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 PDE6HQ13956 83 aa8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 RBMY1FQ15415 496 aaKnown RBP8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 CASC10Q5T4H9 136 aa8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 KCNRGQ8N5I3 272 aa8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 RPP25LQ8N5L8 163 aaKnown RBP8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 IL17DQ8TAD2 202 aa8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 RAB24Q969Q5 203 aa8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 CLUHP3Q96NS8 147 aa8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 ACTR3CQ9C0K3 210 aaPredicted RBP8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 Q9H3A6 140 aa8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 RPH3ALQ9UNE2 315 aa8.72□□□□□ -1.01
SHROOM3-202ENST00000466541 IGKV2-40A0A087WW87 121 aaPredicted RBP8.71□□□□□ -1.02
SHROOM3-202ENST00000466541 A0A0D9SG52 128 aa8.71□□□□□ -1.02
SHROOM3-202ENST00000466541 HMSDA8MTL9 139 aa8.71□□□□□ -1.02
SHROOM3-202ENST00000466541 ZNF705EA8MWA4 302 aaPredicted RBP8.71□□□□□ -1.02
SHROOM3-202ENST00000466541 INSP01308 110 aa8.71□□□□□ -1.02
SHROOM3-202ENST00000466541 IGKV2D-40P01614 121 aaPredicted RBP8.71□□□□□ -1.02
SHROOM3-202ENST00000466541 PRM2P04554 102 aa8.71□□□□□ -1.02
SHROOM3-202ENST00000466541 MIFP14174 115 aa8.71□□□□□ -1.02
SHROOM3-202ENST00000466541 HTN1P15515 57 aa8.71□□□□□ -1.02
SHROOM3-202ENST00000466541 CSN1S1P47710 185 aa8.71□□□□□ -1.02
SHROOM3-202ENST00000466541 NANOS2P60321 138 aaKnown RBP8.71□□□□□ -1.02
SHROOM3-202ENST00000466541 AKR1C8PQ5T2L2 129 aa8.71□□□□□ -1.02
SHROOM3-202ENST00000466541 TMUB2Q71RG4 321 aa8.71□□□□□ -1.02
SHROOM3-202ENST00000466541 Q8NAQ8 132 aa8.71□□□□□ -1.02
SHROOM3-202ENST00000466541 IGF2BP2-AS1Q96M15 143 aa8.71□□□□□ -1.02
SHROOM3-202ENST00000466541 ZNF471Q9BX82 626 aaPredicted RBP8.71□□□□□ -1.02
SHROOM3-202ENST00000466541 PRELID1Q9Y255 219 aa8.71□□□□□ -1.02
SHROOM3-202ENST00000466541 CSMD3Q7Z407 3707 aa8.7□□□□□ -1.02
SHROOM3-202ENST00000466541 A0A1B0GVG6 124 aa8.7□□□□□ -1.02
SHROOM3-202ENST00000466541 PGPA6NDG6 321 aa8.7□□□□□ -1.02
SHROOM3-202ENST00000466541 A8MTW9 85 aa8.7□□□□□ -1.02
SHROOM3-202ENST00000466541 ZNF705GA8MUZ8 300 aaPredicted RBP8.7□□□□□ -1.02
SHROOM3-202ENST00000466541 BCL2L11O43521 198 aa8.7□□□□□ -1.02
SHROOM3-202ENST00000466541 CT45A10P0DMU9 189 aa8.7□□□□□ -1.02
SHROOM3-202ENST00000466541 ZNF345Q14585 488 aa8.7□□□□□ -1.02
SHROOM3-202ENST00000466541 KIR3DS1Q14943 382 aa8.7□□□□□ -1.02
SHROOM3-202ENST00000466541 PQLC2Q6ZP29 291 aa8.7□□□□□ -1.02
SHROOM3-202ENST00000466541 ZNF767PQ75MW2 155 aa8.7□□□□□ -1.02
SHROOM3-202ENST00000466541 SSX7Q7RTT5 188 aa8.7□□□□□ -1.02
SHROOM3-202ENST00000466541 AKAP14Q86UN6 197 aa8.7□□□□□ -1.02
SHROOM3-202ENST00000466541 C1orf158Q8N1D5 194 aa8.7□□□□□ -1.02
SHROOM3-202ENST00000466541 C11orf45Q8TAV5 145 aa8.7□□□□□ -1.02
SHROOM3-202ENST00000466541 LINC01587Q99440 93 aa8.7□□□□□ -1.02
SHROOM3-202ENST00000466541 VGLL1Q99990 258 aa8.7□□□□□ -1.02
SHROOM3-202ENST00000466541 CRXO43186 299 aaPredicted RBP8.69□□□□□ -1.02
SHROOM3-202ENST00000466541 AMBPP02760 352 aa8.69□□□□□ -1.02
SHROOM3-202ENST00000466541 STAG3L2P0CL84 134 aa8.69□□□□□ -1.02
SHROOM3-202ENST00000466541 STAG3L3P0CL85 134 aa8.69□□□□□ -1.02
SHROOM3-202ENST00000466541 GCHFRP30047 84 aa8.69□□□□□ -1.02
SHROOM3-202ENST00000466541 TSPOP30536 169 aa8.69□□□□□ -1.02
SHROOM3-202ENST00000466541 CDKN1BP46527 198 aa8.69□□□□□ -1.02
SHROOM3-202ENST00000466541 FGF8P55075 233 aaPredicted RBP8.69□□□□□ -1.02
SHROOM3-202ENST00000466541 ZNF705AQ6ZN79 300 aaPredicted RBP8.69□□□□□ -1.02
SHROOM3-202ENST00000466541 TCTE3Q8IZS6 198 aa8.69□□□□□ -1.02
SHROOM3-202ENST00000466541 MRPL53Q96EL3 112 aaKnown RBP8.69□□□□□ -1.02
SHROOM3-202ENST00000466541 AGPAT4-IT1Q9H0P7 198 aa8.69□□□□□ -1.02
SHROOM3-202ENST00000466541 C11orf68Q9H3H3 251 aaKnown RBP8.69□□□□□ -1.02
SHROOM3-202ENST00000466541 NPIPB6E9PJ23 425 aa8.68□□□□□ -1.02
SHROOM3-202ENST00000466541 CXorf1O96002 111 aa8.68□□□□□ -1.02
SHROOM3-202ENST00000466541 HBE1P02100 147 aa8.68□□□□□ -1.02
SHROOM3-202ENST00000466541 LEPP41159 167 aa8.68□□□□□ -1.02
SHROOM3-202ENST00000466541 CD300CQ08708 224 aa8.68□□□□□ -1.02
SHROOM3-202ENST00000466541 TMEM78Q5T7P6 136 aa8.68□□□□□ -1.02
SHROOM3-202ENST00000466541 CMTM2Q8TAZ6 248 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms