RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 PATE2Q6UY27 113 aa13.99□□□□□ -0.17
VARS-221ENST00000463184 SCGB1C1Q8TD33 95 aa13.99□□□□□ -0.17
VARS-221ENST00000463184 C16orf92Q96LL3 132 aa13.99□□□□□ -0.17
VARS-221ENST00000463184 PARD6GQ9BYG4 376 aaPredicted RBP13.99□□□□□ -0.17
VARS-221ENST00000463184 SLC25A39Q9BZJ4 359 aaPredicted RBP13.99□□□□□ -0.17
VARS-221ENST00000463184 ARV1Q9H2C2 271 aa13.99□□□□□ -0.17
VARS-221ENST00000463184 PXMP4Q9Y6I8 212 aa13.99□□□□□ -0.17
VARS-221ENST00000463184 RNF222A6NCQ9 220 aa13.98□□□□□ -0.17
VARS-221ENST00000463184 ZNF98A6NK75 572 aa13.98□□□□□ -0.17
VARS-221ENST00000463184 C17orf112F2Z3M2 114 aa13.98□□□□□ -0.17
VARS-221ENST00000463184 OR1L4Q8NGR5 311 aa13.98□□□□□ -0.17
VARS-221ENST00000463184 IGF2BP2-AS1Q96M15 143 aa13.98□□□□□ -0.17
VARS-221ENST00000463184 SHANK2-AS3Q9BTD1 123 aa13.98□□□□□ -0.17
VARS-221ENST00000463184 TMEM208Q9BTX3 173 aa13.98□□□□□ -0.17
VARS-221ENST00000463184 KCNIP2Q9NS61 270 aa13.98□□□□□ -0.17
VARS-221ENST00000463184 SLC39A9Q9NUM3 307 aa13.98□□□□□ -0.17
VARS-221ENST00000463184 RNF24Q9Y225 148 aa13.98□□□□□ -0.17
VARS-221ENST00000463184 NACAE9PAV3 2078 aa13.97□□□□□ -0.17
VARS-221ENST00000463184 hCG_2014768A0A024R1R8 64 aa13.97□□□□□ -0.17
VARS-221ENST00000463184 A8MTW9 85 aa13.97□□□□□ -0.17
VARS-221ENST00000463184 H3BRN7 92 aa13.97□□□□□ -0.17
VARS-221ENST00000463184 COX7A2P2O60397 106 aa13.97□□□□□ -0.17
VARS-221ENST00000463184 GALR1P47211 349 aa13.97□□□□□ -0.17
VARS-221ENST00000463184 ST6GAL2Q96JF0 529 aa13.97□□□□□ -0.17
VARS-221ENST00000463184 C20orf173Q96LM9 149 aa13.97□□□□□ -0.17
VARS-221ENST00000463184 KRTAP4-5Q9BYR2 181 aa13.97□□□□□ -0.17
VARS-221ENST00000463184 DNAJC4Q9NNZ3 241 aa13.97□□□□□ -0.17
VARS-221ENST00000463184 ARPC5O15511 151 aa13.96□□□□□ -0.17
VARS-221ENST00000463184 ZNF266Q14584 549 aa13.96□□□□□ -0.17
VARS-221ENST00000463184 C10orf113Q5VZT2 155 aa13.96□□□□□ -0.17
VARS-221ENST00000463184 AMTNQ6UX39 209 aa13.96□□□□□ -0.17
VARS-221ENST00000463184 TMEM37Q8WXS4 190 aa13.96□□□□□ -0.17
VARS-221ENST00000463184 GPR82Q96P67 336 aa13.96□□□□□ -0.17
VARS-221ENST00000463184 UHRF2Q96PU4 802 aa13.96□□□□□ -0.17
VARS-221ENST00000463184 PFDN5Q99471 154 aa13.96□□□□□ -0.17
VARS-221ENST00000463184 SLC25A22Q9H936 323 aa13.96□□□□□ -0.17
VARS-221ENST00000463184 ABCA13Q86UQ4 5058 aa13.95□□□□□ -0.18
VARS-221ENST00000463184 HMSDA8MTL9 139 aa13.95□□□□□ -0.18
VARS-221ENST00000463184 LINC00305Q7Z4B0 112 aa13.95□□□□□ -0.18
VARS-221ENST00000463184 ATG101Q9BSB4 218 aa13.95□□□□□ -0.18
VARS-221ENST00000463184 LYRM9A8MSI8 78 aa13.94□□□□□ -0.18
VARS-221ENST00000463184 DUSP14O95147 198 aaKnown RBP13.94□□□□□ -0.18
VARS-221ENST00000463184 TCTE3Q8IZS6 198 aa13.94□□□□□ -0.18
VARS-221ENST00000463184 OR11H4Q8NGC9 324 aa13.94□□□□□ -0.18
VARS-221ENST00000463184 RSG1Q9BU20 258 aa13.94□□□□□ -0.18
VARS-221ENST00000463184 SLC25A32Q9H2D1 315 aa13.94□□□□□ -0.18
VARS-221ENST00000463184 RPL7P18124 248 aaKnown RBP13.93□□□□□ -0.18
VARS-221ENST00000463184 C17orf77Q96MU5 243 aa13.93□□□□□ -0.18
VARS-221ENST00000463184 TAAR5O14804 337 aa13.92□□□□□ -0.18
VARS-221ENST00000463184 INSP01308 110 aa13.92□□□□□ -0.18
VARS-221ENST00000463184 ZNF345Q14585 488 aa13.92□□□□□ -0.18
VARS-221ENST00000463184 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.92□□□□□ -0.18
VARS-221ENST00000463184 AKAP14Q86UN6 197 aa13.92□□□□□ -0.18
VARS-221ENST00000463184 TIMM9Q9Y5J7 89 aa13.92□□□□□ -0.18
VARS-221ENST00000463184 HSPG2P98160 4391 aa13.92□□□□□ -0.18
VARS-221ENST00000463184 BORCS7-ASMTA0A0B4J1R7 106 aa13.91□□□□□ -0.18
VARS-221ENST00000463184 A0A1B0GVG6 124 aa13.91□□□□□ -0.18
VARS-221ENST00000463184 ZNF705GA8MUZ8 300 aaPredicted RBP13.91□□□□□ -0.18
VARS-221ENST00000463184 C16orf90A8MZG2 172 aa13.91□□□□□ -0.18
VARS-221ENST00000463184 CRXO43186 299 aaPredicted RBP13.91□□□□□ -0.18
VARS-221ENST00000463184 CDK2AP2O75956 126 aa13.91□□□□□ -0.18
VARS-221ENST00000463184 TSPOP30536 169 aa13.91□□□□□ -0.18
VARS-221ENST00000463184 CNN1P51911 297 aaKnown RBP13.91□□□□□ -0.18
VARS-221ENST00000463184 TNP2Q05952 138 aa13.91□□□□□ -0.18
VARS-221ENST00000463184 SPINK13Q1W4C9 94 aa13.91□□□□□ -0.18
VARS-221ENST00000463184 NBDYA0A0U1RRE5 68 aa13.9□□□□□ -0.18
VARS-221ENST00000463184 PRM2P04554 102 aa13.9□□□□□ -0.18
VARS-221ENST00000463184 GCSAMLQ5JQS6 135 aa13.9□□□□□ -0.18
VARS-221ENST00000463184 FFAR4Q5NUL3 377 aa13.9□□□□□ -0.18
VARS-221ENST00000463184 RPL7L1Q6DKI1 246 aaKnown RBP13.9□□□□□ -0.18
VARS-221ENST00000463184 KCNRGQ8N5I3 272 aa13.9□□□□□ -0.18
VARS-221ENST00000463184 HSD17B11Q8NBQ5 300 aa13.9□□□□□ -0.18
VARS-221ENST00000463184 A0A0D9SG52 128 aa13.89□□□□□ -0.19
VARS-221ENST00000463184 M0R2Z0 102 aa13.89□□□□□ -0.19
VARS-221ENST00000463184 DEFB130BP0DP73 79 aa13.89□□□□□ -0.19
VARS-221ENST00000463184 DEFB130AP0DP74 79 aa13.89□□□□□ -0.19
VARS-221ENST00000463184 MORN5Q5VZ52 161 aa13.89□□□□□ -0.19
VARS-221ENST00000463184 BPIFA4PQ86YQ2 179 aa13.89□□□□□ -0.19
VARS-221ENST00000463184 C6orf223Q8N319 242 aa13.89□□□□□ -0.19
VARS-221ENST00000463184 ZNRF2Q8NHG8 242 aa13.89□□□□□ -0.19
VARS-221ENST00000463184 PSMG3Q9BT73 122 aaPredicted RBP13.89□□□□□ -0.19
VARS-221ENST00000463184 F5H768 121 aa13.88□□□□□ -0.19
VARS-221ENST00000463184 MRPS12O15235 138 aaKnown RBP13.88□□□□□ -0.19
VARS-221ENST00000463184 ATP6V0CP27449 155 aa13.88□□□□□ -0.19
VARS-221ENST00000463184 CCL18P55774 89 aa13.88□□□□□ -0.19
VARS-221ENST00000463184 ARPC5LQ9BPX5 153 aa13.88□□□□□ -0.19
VARS-221ENST00000463184 MRPL32Q9BYC8 188 aaKnown RBP13.88□□□□□ -0.19
VARS-221ENST00000463184 A0A087X0K7 114 aa13.87□□□□□ -0.19
VARS-221ENST00000463184 TRAV8-2A0A0B4J237 113 aa13.87□□□□□ -0.19
VARS-221ENST00000463184 TRAV5A0A0B4J249 113 aa13.87□□□□□ -0.19
VARS-221ENST00000463184 NUDT3O95989 172 aa13.87□□□□□ -0.19
VARS-221ENST00000463184 C1QBP02746 253 aa13.87□□□□□ -0.19
VARS-221ENST00000463184 CXCL2P19875 107 aa13.87□□□□□ -0.19
VARS-221ENST00000463184 ACOT6Q3I5F7 207 aaPredicted RBP13.87□□□□□ -0.19
VARS-221ENST00000463184 IGFL4Q6B9Z1 124 aa13.87□□□□□ -0.19
VARS-221ENST00000463184 OR2G3Q8NGZ4 309 aa13.87□□□□□ -0.19
VARS-221ENST00000463184 GNPNAT1Q96EK6 184 aaPredicted RBP13.87□□□□□ -0.19
VARS-221ENST00000463184 CYTL1Q9NRR1 136 aa13.87□□□□□ -0.19
VARS-221ENST00000463184 PLAC8L1A1L4L8 177 aa13.86□□□□□ -0.19
VARS-221ENST00000463184 CBY3A6NI87 242 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms