RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 INSP01308 110 aa7.85□□□□□ -1.15
UBR4-208ENST00000459947 OR4B1Q8NGF8 309 aa7.85□□□□□ -1.15
UBR4-208ENST00000459947 LINC00477Q96M19 166 aa7.85□□□□□ -1.15
UBR4-208ENST00000459947 OTORQ9NRC9 128 aa7.85□□□□□ -1.15
UBR4-208ENST00000459947 ZNF586Q9NXT0 402 aa7.85□□□□□ -1.15
UBR4-208ENST00000459947 DNAH3Q8TD57 4116 aa7.85□□□□□ -1.15
UBR4-208ENST00000459947 DEFB135Q30KP9 77 aa7.85□□□□□ -1.15
UBR4-208ENST00000459947 ST6GAL2Q96JF0 529 aa7.85□□□□□ -1.15
UBR4-208ENST00000459947 RARRES2Q99969 163 aa7.85□□□□□ -1.15
UBR4-208ENST00000459947 TRAV5A0A0B4J249 113 aa7.84□□□□□ -1.15
UBR4-208ENST00000459947 RBAKDNA6NC62 111 aa7.84□□□□□ -1.15
UBR4-208ENST00000459947 NMBP08949 121 aa7.84□□□□□ -1.15
UBR4-208ENST00000459947 HIST1H1AQ02539 215 aaPredicted RBP7.84□□□□□ -1.15
UBR4-208ENST00000459947 IGF2BP2-AS1Q96M15 143 aa7.84□□□□□ -1.15
UBR4-208ENST00000459947 NKX6-2Q9C056 277 aaPredicted RBP7.84□□□□□ -1.15
UBR4-208ENST00000459947 STAG3L2P0CL84 134 aa7.84□□□□□ -1.15
UBR4-208ENST00000459947 STAG3L3P0CL85 134 aa7.84□□□□□ -1.15
UBR4-208ENST00000459947 PPT1P50897 306 aa7.84□□□□□ -1.15
UBR4-208ENST00000459947 RAB5CP51148 216 aa7.84□□□□□ -1.15
UBR4-208ENST00000459947 FXYD5Q96DB9 178 aa7.84□□□□□ -1.15
UBR4-208ENST00000459947 C20orf173Q96LM9 149 aa7.84□□□□□ -1.15
UBR4-208ENST00000459947 H3BQ15 152 aa7.84□□□□□ -1.15
UBR4-208ENST00000459947 RAB2AP61019 212 aa7.84□□□□□ -1.15
UBR4-208ENST00000459947 LGALSLQ3ZCW2 172 aaPredicted RBP7.84□□□□□ -1.15
UBR4-208ENST00000459947 GCSAMLQ5JQS6 135 aa7.84□□□□□ -1.15
UBR4-208ENST00000459947 ZNF471Q9BX82 626 aaPredicted RBP7.84□□□□□ -1.15
UBR4-208ENST00000459947 NPIPB6E9PJ23 425 aa7.83□□□□□ -1.16
UBR4-208ENST00000459947 TEX46H3BTG2 121 aa7.83□□□□□ -1.16
UBR4-208ENST00000459947 MORN5Q5VZ52 161 aa7.83□□□□□ -1.16
UBR4-208ENST00000459947 TMUB2Q71RG4 321 aa7.83□□□□□ -1.16
UBR4-208ENST00000459947 CMTM2Q8TAZ6 248 aa7.83□□□□□ -1.16
UBR4-208ENST00000459947 C17orf77Q96MU5 243 aa7.83□□□□□ -1.16
UBR4-208ENST00000459947 TCEAL7Q9BRU2 100 aa7.83□□□□□ -1.16
UBR4-208ENST00000459947 LENEPQ9Y5L5 61 aa7.83□□□□□ -1.16
UBR4-208ENST00000459947 ARL2-SNX15V9GYD0 113 aa7.83□□□□□ -1.16
UBR4-208ENST00000459947 ZNF705EA8MWA4 302 aaPredicted RBP7.83□□□□□ -1.16
UBR4-208ENST00000459947 K7EQM0 130 aa7.83□□□□□ -1.16
UBR4-208ENST00000459947 CNN1P51911 297 aaKnown RBP7.83□□□□□ -1.16
UBR4-208ENST00000459947 ZNF124Q15973 351 aa7.83□□□□□ -1.16
UBR4-208ENST00000459947 OR11H2Q8NH07 326 aa7.83□□□□□ -1.16
UBR4-208ENST00000459947 SUN5Q8TC36 379 aa7.83□□□□□ -1.16
UBR4-208ENST00000459947 BLNKQ8WV28 456 aa7.82□□□□□ -1.16
UBR4-208ENST00000459947 TMED6Q8WW62 240 aa7.82□□□□□ -1.16
UBR4-208ENST00000459947 RAB24Q969Q5 203 aa7.82□□□□□ -1.16
UBR4-208ENST00000459947 CYTL1Q9NRR1 136 aa7.82□□□□□ -1.16
UBR4-208ENST00000459947 PYYP10082 97 aa7.82□□□□□ -1.16
UBR4-208ENST00000459947 TMEM78Q5T7P6 136 aa7.82□□□□□ -1.16
UBR4-208ENST00000459947 BAP18Q8IXM2 172 aa7.82□□□□□ -1.16
UBR4-208ENST00000459947 HBE1P02100 147 aa7.82□□□□□ -1.16
UBR4-208ENST00000459947 SLC51BQ86UW2 128 aa7.82□□□□□ -1.16
UBR4-208ENST00000459947 EDA2RQ9HAV5 297 aa7.82□□□□□ -1.16
UBR4-208ENST00000459947 GCHFRP30047 84 aa7.81□□□□□ -1.16
UBR4-208ENST00000459947 RNF182Q8N6D2 247 aa7.81□□□□□ -1.16
UBR4-208ENST00000459947 MUC7Q8TAX7 377 aa7.81□□□□□ -1.16
UBR4-208ENST00000459947 Q9H3A6 140 aa7.81□□□□□ -1.16
UBR4-208ENST00000459947 NDUFB4O95168 129 aa7.81□□□□□ -1.16
UBR4-208ENST00000459947 CDKN1BP46527 198 aa7.81□□□□□ -1.16
UBR4-208ENST00000459947 ICAM4Q14773 271 aa7.81□□□□□ -1.16
UBR4-208ENST00000459947 ZFP69Q49AA0 526 aa7.81□□□□□ -1.16
UBR4-208ENST00000459947 AMTNQ6UX39 209 aa7.81□□□□□ -1.16
UBR4-208ENST00000459947 C9orf47Q6ZRZ4 202 aa7.81□□□□□ -1.16
UBR4-208ENST00000459947 A0A1W2PRE2 83 aa7.81□□□□□ -1.16
UBR4-208ENST00000459947 SLC17A3O00476 420 aa7.81□□□□□ -1.16
UBR4-208ENST00000459947 RETNQ9HD89 108 aa7.81□□□□□ -1.16
UBR4-208ENST00000459947 SMLR1H3BR10 107 aa7.8□□□□□ -1.16
UBR4-208ENST00000459947 C5orf17Q8NAS9 161 aa7.8□□□□□ -1.16
UBR4-208ENST00000459947 TMEM208Q9BTX3 173 aa7.8□□□□□ -1.16
UBR4-208ENST00000459947 ZNF705AQ6ZN79 300 aaPredicted RBP7.8□□□□□ -1.16
UBR4-208ENST00000459947 RPP25LQ8N5L8 163 aaKnown RBP7.8□□□□□ -1.16
UBR4-208ENST00000459947 XCL2Q9UBD3 114 aa7.8□□□□□ -1.16
UBR4-208ENST00000459947 ARL14EPLP0DKL9 152 aa7.8□□□□□ -1.16
UBR4-208ENST00000459947 ZNF493Q6ZR52 646 aa7.8□□□□□ -1.16
UBR4-208ENST00000459947 OR11H4Q8NGC9 324 aa7.8□□□□□ -1.16
UBR4-208ENST00000459947 NDFIP1Q9BT67 221 aa7.8□□□□□ -1.16
UBR4-208ENST00000459947 OR10J4P0C629 311 aa7.79□□□□□ -1.16
UBR4-208ENST00000459947 GDF5OSQ5U4N7 250 aa7.79□□□□□ -1.16
UBR4-208ENST00000459947 CSNK1G2-AS1Q8NCQ2 148 aa7.79□□□□□ -1.16
UBR4-208ENST00000459947 PHYHIPLQ96FC7 376 aa7.79□□□□□ -1.16
UBR4-208ENST00000459947 MAP1LC3B2A6NCE7 125 aa7.79□□□□□ -1.16
UBR4-208ENST00000459947 F6UZH7 168 aa7.79□□□□□ -1.16
UBR4-208ENST00000459947 H7BYZ3 331 aa7.79□□□□□ -1.16
UBR4-208ENST00000459947 FHITP49789 147 aa7.79□□□□□ -1.16
UBR4-208ENST00000459947 RRN3P1Q2M238 152 aa7.79□□□□□ -1.16
UBR4-208ENST00000459947 MAP1LC3BQ9GZQ8 125 aa7.79□□□□□ -1.16
UBR4-208ENST00000459947 SH3BGRL3Q9H299 93 aa7.79□□□□□ -1.16
UBR4-208ENST00000459947 MEGF8Q7Z7M0 2845 aa7.79□□□□□ -1.16
UBR4-208ENST00000459947 ZNF705FA8MVS1 300 aaPredicted RBP7.79□□□□□ -1.16
UBR4-208ENST00000459947 F6UB75 175 aa7.79□□□□□ -1.16
UBR4-208ENST00000459947 GIG44P09565 113 aaPredicted RBP7.79□□□□□ -1.16
UBR4-208ENST00000459947 ZNF705DP0CH99 300 aaPredicted RBP7.79□□□□□ -1.16
UBR4-208ENST00000459947 ZNF705BP0CI00 300 aaPredicted RBP7.79□□□□□ -1.16
UBR4-208ENST00000459947 ZNF138P52744 262 aa7.79□□□□□ -1.16
UBR4-208ENST00000459947 ZNF503Q96F45 646 aa7.79□□□□□ -1.16
UBR4-208ENST00000459947 NIPSNAP3BQ9BS92 247 aa7.79□□□□□ -1.16
UBR4-208ENST00000459947 IGKV3-20P01619 116 aa7.78□□□□□ -1.16
UBR4-208ENST00000459947 CRISP2P16562 243 aa7.78□□□□□ -1.16
UBR4-208ENST00000459947 RANP62826 216 aaKnown RBP7.78□□□□□ -1.16
UBR4-208ENST00000459947 LINC00467Q9BRT7 94 aa7.78□□□□□ -1.16
UBR4-208ENST00000459947 NUPR2A6NF83 97 aa7.78□□□□□ -1.16
UBR4-208ENST00000459947 H3BTX0 84 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms