RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 DAD1P61803 113 aa11.77□□□□□ -0.53
RAB11FIP3-204ENST00000449879 LGALS9BQ3B8N2 356 aa11.77□□□□□ -0.53
RAB11FIP3-204ENST00000449879 AMTNQ6UX39 209 aa11.77□□□□□ -0.53
RAB11FIP3-204ENST00000449879 RNF182Q8N6D2 247 aa11.77□□□□□ -0.53
RAB11FIP3-204ENST00000449879 SMIM3Q9BZL3 60 aa11.77□□□□□ -0.53
RAB11FIP3-204ENST00000449879 A8MTW9 85 aa11.76□□□□□ -0.53
RAB11FIP3-204ENST00000449879 M0R2Z0 102 aa11.76□□□□□ -0.53
RAB11FIP3-204ENST00000449879 MRPS12O15235 138 aaKnown RBP11.76□□□□□ -0.53
RAB11FIP3-204ENST00000449879 IFNA5P01569 189 aa11.76□□□□□ -0.53
RAB11FIP3-204ENST00000449879 PRM2P04554 102 aa11.76□□□□□ -0.53
RAB11FIP3-204ENST00000449879 CNN1P51911 297 aaKnown RBP11.76□□□□□ -0.53
RAB11FIP3-204ENST00000449879 SPINK13Q1W4C9 94 aa11.76□□□□□ -0.53
RAB11FIP3-204ENST00000449879 MORN5Q5VZ52 161 aa11.76□□□□□ -0.53
RAB11FIP3-204ENST00000449879 TRAV8-2A0A0B4J237 113 aa11.75□□□□□ -0.53
RAB11FIP3-204ENST00000449879 ZNF705GA8MUZ8 300 aaPredicted RBP11.75□□□□□ -0.53
RAB11FIP3-204ENST00000449879 DUSP14O95147 198 aaKnown RBP11.75□□□□□ -0.53
RAB11FIP3-204ENST00000449879 CXCL2P19875 107 aa11.75□□□□□ -0.53
RAB11FIP3-204ENST00000449879 TMEM88Q6PEY1 159 aa11.75□□□□□ -0.53
RAB11FIP3-204ENST00000449879 LCN15Q6UWW0 184 aa11.75□□□□□ -0.53
RAB11FIP3-204ENST00000449879 LRRC20Q8TCA0 184 aa11.75□□□□□ -0.53
RAB11FIP3-204ENST00000449879 SCGB1C1Q8TD33 95 aa11.75□□□□□ -0.53
RAB11FIP3-204ENST00000449879 OR2T35Q8NGX2 323 aa11.74□□□□□ -0.53
RAB11FIP3-204ENST00000449879 AQP10Q96PS8 301 aa11.74□□□□□ -0.53
RAB11FIP3-204ENST00000449879 PARD6GQ9BYG4 376 aaPredicted RBP11.74□□□□□ -0.53
RAB11FIP3-204ENST00000449879 KIAA1109Q2LD37 5005 aa11.73□□□□□ -0.53
RAB11FIP3-204ENST00000449879 TRAV5A0A0B4J249 113 aa11.73□□□□□ -0.53
RAB11FIP3-204ENST00000449879 CRXO43186 299 aaPredicted RBP11.73□□□□□ -0.53
RAB11FIP3-204ENST00000449879 INSP01308 110 aa11.73□□□□□ -0.53
RAB11FIP3-204ENST00000449879 RNF212Q495C1 297 aa11.73□□□□□ -0.53
RAB11FIP3-204ENST00000449879 Q5BKY6 102 aa11.73□□□□□ -0.53
RAB11FIP3-204ENST00000449879 GCSAMLQ5JQS6 135 aa11.73□□□□□ -0.53
RAB11FIP3-204ENST00000449879 ZNF738Q8NE65 137 aa11.73□□□□□ -0.53
RAB11FIP3-204ENST00000449879 SLC50A1Q9BRV3 221 aa11.73□□□□□ -0.53
RAB11FIP3-204ENST00000449879 TRAV12-2A0A075B6T6 113 aa11.72□□□□□ -0.53
RAB11FIP3-204ENST00000449879 IGLC2P0DOY2 106 aa11.72□□□□□ -0.53
RAB11FIP3-204ENST00000449879 Q6ZR54 194 aa11.72□□□□□ -0.53
RAB11FIP3-204ENST00000449879 BAP18Q8IXM2 172 aa11.72□□□□□ -0.53
RAB11FIP3-204ENST00000449879 INO80EQ8NBZ0 244 aaPredicted RBP11.72□□□□□ -0.53
RAB11FIP3-204ENST00000449879 WFDC1Q9HC57 220 aa11.72□□□□□ -0.53
RAB11FIP3-204ENST00000449879 MUC4Q99102 2169 aa11.71□□□□□ -0.53
RAB11FIP3-204ENST00000449879 NACAE9PAV3 2078 aa11.71□□□□□ -0.53
RAB11FIP3-204ENST00000449879 FXYD6-FXYD2A0A087WZ82 144 aa11.71□□□□□ -0.53
RAB11FIP3-204ENST00000449879 SNRPCP09234 159 aaKnown RBP11.71□□□□□ -0.53
RAB11FIP3-204ENST00000449879 DEFB130BP0DP73 79 aa11.71□□□□□ -0.53
RAB11FIP3-204ENST00000449879 DEFB130AP0DP74 79 aa11.71□□□□□ -0.53
RAB11FIP3-204ENST00000449879 PRB4P10163 310 aaPredicted RBP11.71□□□□□ -0.53
RAB11FIP3-204ENST00000449879 RHOBP62745 196 aa11.71□□□□□ -0.53
RAB11FIP3-204ENST00000449879 HIST1H1AQ02539 215 aaPredicted RBP11.71□□□□□ -0.53
RAB11FIP3-204ENST00000449879 ZNF266Q14584 549 aa11.71□□□□□ -0.53
RAB11FIP3-204ENST00000449879 PSG3Q16557 428 aa11.71□□□□□ -0.53
RAB11FIP3-204ENST00000449879 GUK1Q16774 197 aa11.71□□□□□ -0.53
RAB11FIP3-204ENST00000449879 MRPL32Q9BYC8 188 aaKnown RBP11.71□□□□□ -0.53
RAB11FIP3-204ENST00000449879 ZNF331Q9NQX6 463 aaPredicted RBP11.71□□□□□ -0.53
RAB11FIP3-204ENST00000449879 PPP1R14DQ9NXH3 145 aa11.71□□□□□ -0.53
RAB11FIP3-204ENST00000449879 TMEM14CQ9P0S9 112 aa11.71□□□□□ -0.53
RAB11FIP3-204ENST00000449879 FAT2Q9NYQ8 4349 aa11.71□□□□□ -0.54
RAB11FIP3-204ENST00000449879 DNAH2Q9P225 4427 aa11.7□□□□□ -0.54
RAB11FIP3-204ENST00000449879 LYRM9A8MSI8 78 aa11.7□□□□□ -0.54
RAB11FIP3-204ENST00000449879 H3BQ15 152 aa11.7□□□□□ -0.54
RAB11FIP3-204ENST00000449879 MED14OSP0DP75 135 aa11.7□□□□□ -0.54
RAB11FIP3-204ENST00000449879 AZU1P20160 251 aa11.7□□□□□ -0.54
RAB11FIP3-204ENST00000449879 FFAR4Q5NUL3 377 aa11.7□□□□□ -0.54
RAB11FIP3-204ENST00000449879 LINC01587Q99440 93 aa11.7□□□□□ -0.54
RAB11FIP3-204ENST00000449879 TNFSF18Q9UNG2 199 aa11.7□□□□□ -0.54
RAB11FIP3-204ENST00000449879 H3BTX0 84 aa11.69□□□□□ -0.54
RAB11FIP3-204ENST00000449879 BOLA2-SMG1P6H3BVE0 249 aa11.69□□□□□ -0.54
RAB11FIP3-204ENST00000449879 SLC17A3O00476 420 aa11.69□□□□□ -0.54
RAB11FIP3-204ENST00000449879 HTN1P15515 57 aa11.69□□□□□ -0.54
RAB11FIP3-204ENST00000449879 SOHLH1Q5JUK2 328 aa11.69□□□□□ -0.54
RAB11FIP3-204ENST00000449879 MIR17HGQ75NE6 70 aa11.69□□□□□ -0.54
RAB11FIP3-204ENST00000449879 C15orf53Q8NAA6 179 aa11.69□□□□□ -0.54
RAB11FIP3-204ENST00000449879 OR8A1Q8NGG7 326 aa11.69□□□□□ -0.54
RAB11FIP3-204ENST00000449879 SAT2Q96F10 170 aaPredicted RBP11.69□□□□□ -0.54
RAB11FIP3-204ENST00000449879 FUT9Q9Y231 359 aa11.69□□□□□ -0.54
RAB11FIP3-204ENST00000449879 TIMM9Q9Y5J7 89 aa11.69□□□□□ -0.54
RAB11FIP3-204ENST00000449879 DNAH17Q9UFH2 4485 aa11.69□□□□□ -0.54
RAB11FIP3-204ENST00000449879 RNF222A6NCQ9 220 aa11.68□□□□□ -0.54
RAB11FIP3-204ENST00000449879 F5H768 121 aa11.68□□□□□ -0.54
RAB11FIP3-204ENST00000449879 ZNF253O75346 499 aa11.68□□□□□ -0.54
RAB11FIP3-204ENST00000449879 HIST1H1EP10412 219 aaKnown RBP11.68□□□□□ -0.54
RAB11FIP3-204ENST00000449879 TSPOP30536 169 aa11.68□□□□□ -0.54
RAB11FIP3-204ENST00000449879 C1orf134Q5TEV5 83 aa11.68□□□□□ -0.54
RAB11FIP3-204ENST00000449879 RPUSD4Q96CM3 377 aaKnown RBP11.68□□□□□ -0.54
RAB11FIP3-204ENST00000449879 ATG101Q9BSB4 218 aa11.68□□□□□ -0.54
RAB11FIP3-204ENST00000449879 SLC25A2Q9BXI2 301 aa11.68□□□□□ -0.54
RAB11FIP3-204ENST00000449879 ZNF586Q9NXT0 402 aa11.68□□□□□ -0.54
RAB11FIP3-204ENST00000449879 TRBV19A0A075B6N1 114 aa11.67□□□□□ -0.54
RAB11FIP3-204ENST00000449879 G3V3Q6 166 aa11.67□□□□□ -0.54
RAB11FIP3-204ENST00000449879 PYYP10082 97 aa11.67□□□□□ -0.54
RAB11FIP3-204ENST00000449879 PDE6HQ13956 83 aa11.67□□□□□ -0.54
RAB11FIP3-204ENST00000449879 HSD17B11Q8NBQ5 300 aa11.67□□□□□ -0.54
RAB11FIP3-204ENST00000449879 FAM167A-AS1Q96KT0 104 aa11.67□□□□□ -0.54
RAB11FIP3-204ENST00000449879 PKHD1P08F94 4074 aa11.66□□□□□ -0.54
RAB11FIP3-204ENST00000449879 PLAC8L1A1L4L8 177 aa11.66□□□□□ -0.54
RAB11FIP3-204ENST00000449879 NUDT3O95989 172 aa11.66□□□□□ -0.54
RAB11FIP3-204ENST00000449879 ACOT6Q3I5F7 207 aaPredicted RBP11.66□□□□□ -0.54
RAB11FIP3-204ENST00000449879 TMEM256Q8N2U0 113 aa11.66□□□□□ -0.54
RAB11FIP3-204ENST00000449879 OR51M1Q9H341 326 aa11.66□□□□□ -0.54
RAB11FIP3-204ENST00000449879 BORCS7-ASMTA0A0B4J1R7 106 aa11.65□□□□□ -0.54
RAB11FIP3-204ENST00000449879 OR7C2O60412 319 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms