RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 CLUHP3Q96NS8 147 aa10.38□□□□□ -0.75
SSBP3-208ENST00000444533 CTXND1A0A1B0GTU2 59 aa10.37□□□□□ -0.75
SSBP3-208ENST00000444533 F6UB75 175 aa10.37□□□□□ -0.75
SSBP3-208ENST00000444533 HMGB3O15347 200 aaKnown RBP10.37□□□□□ -0.75
SSBP3-208ENST00000444533 AMBPP02760 352 aa10.37□□□□□ -0.75
SSBP3-208ENST00000444533 OR8A1Q8NGG7 326 aa10.37□□□□□ -0.75
SSBP3-208ENST00000444533 CMTM2Q8TAZ6 248 aa10.37□□□□□ -0.75
SSBP3-208ENST00000444533 FXYD5Q96DB9 178 aa10.37□□□□□ -0.75
SSBP3-208ENST00000444533 TMEM167BQ9NRX6 74 aa10.37□□□□□ -0.75
SSBP3-208ENST00000444533 STAG3L2P0CL84 134 aa10.36□□□□□ -0.75
SSBP3-208ENST00000444533 STAG3L3P0CL85 134 aa10.36□□□□□ -0.75
SSBP3-208ENST00000444533 ARL14EPLP0DKL9 152 aa10.36□□□□□ -0.75
SSBP3-208ENST00000444533 HLA-DMBP28068 263 aa10.36□□□□□ -0.75
SSBP3-208ENST00000444533 CNN1P51911 297 aaKnown RBP10.36□□□□□ -0.75
SSBP3-208ENST00000444533 RANP62826 216 aaKnown RBP10.36□□□□□ -0.75
SSBP3-208ENST00000444533 ICAM4Q14773 271 aa10.36□□□□□ -0.75
SSBP3-208ENST00000444533 LGALSLQ3ZCW2 172 aaPredicted RBP10.36□□□□□ -0.75
SSBP3-208ENST00000444533 GDF5OSQ5U4N7 250 aa10.36□□□□□ -0.75
SSBP3-208ENST00000444533 SLC51BQ86UW2 128 aa10.36□□□□□ -0.75
SSBP3-208ENST00000444533 RNF183Q96D59 192 aa10.36□□□□□ -0.75
SSBP3-208ENST00000444533 TSPOP30536 169 aa10.35□□□□□ -0.75
SSBP3-208ENST00000444533 DPPA3Q6W0C5 159 aa10.35□□□□□ -0.75
SSBP3-208ENST00000444533 RXFP4Q8TDU9 374 aa10.35□□□□□ -0.75
SSBP3-208ENST00000444533 Q9H3A6 140 aa10.35□□□□□ -0.75
SSBP3-208ENST00000444533 RETNQ9HD89 108 aa10.35□□□□□ -0.75
SSBP3-208ENST00000444533 ZNF705FA8MVS1 300 aaPredicted RBP10.34□□□□□ -0.75
SSBP3-208ENST00000444533 TEX46H3BTG2 121 aa10.34□□□□□ -0.75
SSBP3-208ENST00000444533 NDUFB4O95168 129 aa10.34□□□□□ -0.75
SSBP3-208ENST00000444533 GCHFRP30047 84 aa10.34□□□□□ -0.75
SSBP3-208ENST00000444533 RAB5CP51148 216 aa10.34□□□□□ -0.75
SSBP3-208ENST00000444533 DEFB1P60022 68 aa10.34□□□□□ -0.75
SSBP3-208ENST00000444533 EXOC3-AS1Q8N2X6 119 aa10.34□□□□□ -0.75
SSBP3-208ENST00000444533 PHYHIPLQ96FC7 376 aa10.34□□□□□ -0.75
SSBP3-208ENST00000444533 RARRES2Q99969 163 aa10.34□□□□□ -0.75
SSBP3-208ENST00000444533 OVOL2Q9BRP0 275 aa10.34□□□□□ -0.75
SSBP3-208ENST00000444533 OTORQ9NRC9 128 aa10.34□□□□□ -0.75
SSBP3-208ENST00000444533 XCL2Q9UBD3 114 aa10.34□□□□□ -0.75
SSBP3-208ENST00000444533 ZNF705DP0CH99 300 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-208ENST00000444533 ZNF705BP0CI00 300 aaPredicted RBP10.33□□□□□ -0.76
SSBP3-208ENST00000444533 TMEM78Q5T7P6 136 aa10.33□□□□□ -0.76
SSBP3-208ENST00000444533 OR11H2Q8NH07 326 aa10.33□□□□□ -0.76
SSBP3-208ENST00000444533 FAM213BQ8TBF2 198 aa10.33□□□□□ -0.76
SSBP3-208ENST00000444533 TMED6Q8WW62 240 aa10.33□□□□□ -0.76
SSBP3-208ENST00000444533 ZNF503Q96F45 646 aa10.33□□□□□ -0.76
SSBP3-208ENST00000444533 TMEM208Q9BTX3 173 aa10.33□□□□□ -0.76
SSBP3-208ENST00000444533 GOLT1BQ9Y3E0 138 aa10.33□□□□□ -0.76
SSBP3-208ENST00000444533 PRKDCP78527 4128 aaKnown RBP10.32□□□□□ -0.76
SSBP3-208ENST00000444533 MAP1LC3B2A6NCE7 125 aa10.32□□□□□ -0.76
SSBP3-208ENST00000444533 PGPA6NDG6 321 aa10.32□□□□□ -0.76
SSBP3-208ENST00000444533 BOLA2-SMG1P6H3BVE0 249 aa10.32□□□□□ -0.76
SSBP3-208ENST00000444533 K7EQM0 130 aa10.32□□□□□ -0.76
SSBP3-208ENST00000444533 M0R3E3 92 aa10.32□□□□□ -0.76
SSBP3-208ENST00000444533 EIF3GO75821 320 aaKnown RBP eCLIP10.32□□□□□ -0.76
SSBP3-208ENST00000444533 LEPP41159 167 aa10.32□□□□□ -0.76
SSBP3-208ENST00000444533 FXYD7P58549 80 aa10.32□□□□□ -0.76
SSBP3-208ENST00000444533 LINC00477Q96M19 166 aa10.32□□□□□ -0.76
SSBP3-208ENST00000444533 MAP1LC3BQ9GZQ8 125 aa10.32□□□□□ -0.76
SSBP3-208ENST00000444533 SLC35B3Q9H1N7 401 aa10.32□□□□□ -0.76
SSBP3-208ENST00000444533 INSP01308 110 aa10.31□□□□□ -0.76
SSBP3-208ENST00000444533 CD300CQ08708 224 aa10.31□□□□□ -0.76
SSBP3-208ENST00000444533 C9orf62Q8N4C0 152 aa10.31□□□□□ -0.76
SSBP3-208ENST00000444533 SFT2D1Q8WV19 159 aa10.31□□□□□ -0.76
SSBP3-208ENST00000444533 WWC2-AS2Q96NR7 200 aa10.31□□□□□ -0.76
SSBP3-208ENST00000444533 NKX6-2Q9C056 277 aaPredicted RBP10.31□□□□□ -0.76
SSBP3-208ENST00000444533 RPH3ALQ9UNE2 315 aa10.31□□□□□ -0.76
SSBP3-208ENST00000444533 IGHV3OR16-12A0A075B7B8 117 aa10.3□□□□□ -0.76
SSBP3-208ENST00000444533 A8MTW9 85 aa10.3□□□□□ -0.76
SSBP3-208ENST00000444533 NPIPB6E9PJ23 425 aa10.3□□□□□ -0.76
SSBP3-208ENST00000444533 SLC25A5P05141 298 aaKnown RBP10.3□□□□□ -0.76
SSBP3-208ENST00000444533 H2AFB1P0C5Y9 115 aa10.3□□□□□ -0.76
SSBP3-208ENST00000444533 CDKN1BP46527 198 aa10.3□□□□□ -0.76
SSBP3-208ENST00000444533 SPINK13Q1W4C9 94 aa10.3□□□□□ -0.76
SSBP3-208ENST00000444533 ARL6IP6Q8N6S5 226 aa10.3□□□□□ -0.76
SSBP3-208ENST00000444533 IL17DQ8TAD2 202 aa10.3□□□□□ -0.76
SSBP3-208ENST00000444533 IGF2BP2-AS1Q96M15 143 aa10.3□□□□□ -0.76
SSBP3-208ENST00000444533 AGRNO00468 2067 aa10.3□□□□□ -0.76
SSBP3-208ENST00000444533 SERTM2A0A1B0GWG4 89 aa10.29□□□□□ -0.76
SSBP3-208ENST00000444533 A0A1W2PRE2 83 aa10.29□□□□□ -0.76
SSBP3-208ENST00000444533 RBAKDNA6NC62 111 aa10.29□□□□□ -0.76
SSBP3-208ENST00000444533 PRAC2D3DTV9 90 aa10.29□□□□□ -0.76
SSBP3-208ENST00000444533 M0R2Z0 102 aa10.29□□□□□ -0.76
SSBP3-208ENST00000444533 MIFP14174 115 aa10.29□□□□□ -0.76
SSBP3-208ENST00000444533 PPT1P50897 306 aa10.29□□□□□ -0.76
SSBP3-208ENST00000444533 FGF8P55075 233 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-208ENST00000444533 ZNF726P1Q15940 193 aa10.29□□□□□ -0.76
SSBP3-208ENST00000444533 C5orf17Q8NAS9 161 aa10.29□□□□□ -0.76
SSBP3-208ENST00000444533 ODF3Q96PU9 254 aa10.29□□□□□ -0.76
SSBP3-208ENST00000444533 IGKV2-40A0A087WW87 121 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-208ENST00000444533 SMIM9A6NGZ8 99 aa10.28□□□□□ -0.76
SSBP3-208ENST00000444533 IFNA7P01567 189 aa10.28□□□□□ -0.76
SSBP3-208ENST00000444533 IGKV2D-40P01614 121 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-208ENST00000444533 HBE1P02100 147 aa10.28□□□□□ -0.76
SSBP3-208ENST00000444533 GIG44P09565 113 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-208ENST00000444533 AMTNQ6UX39 209 aa10.28□□□□□ -0.76
SSBP3-208ENST00000444533 C9orf47Q6ZRZ4 202 aa10.28□□□□□ -0.76
SSBP3-208ENST00000444533 TMEM256Q8N2U0 113 aa10.28□□□□□ -0.76
SSBP3-208ENST00000444533 SUN5Q8TC36 379 aa10.28□□□□□ -0.76
SSBP3-208ENST00000444533 TGP01266 2768 aa10.28□□□□□ -0.76
SSBP3-208ENST00000444533 DIRC3C9JPN6 131 aa10.27□□□□□ -0.77
SSBP3-208ENST00000444533 F6UZH7 168 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms