RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 M0R3E3 92 aa11.7□□□□□ -0.54
USP39-205ENST00000442708 PFDN1O60925 122 aa11.7□□□□□ -0.54
USP39-205ENST00000442708 STAG3L2P0CL84 134 aa11.7□□□□□ -0.54
USP39-205ENST00000442708 STAG3L3P0CL85 134 aa11.7□□□□□ -0.54
USP39-205ENST00000442708 ARL14EPLP0DKL9 152 aa11.7□□□□□ -0.54
USP39-205ENST00000442708 CNN1P51911 297 aaKnown RBP11.7□□□□□ -0.54
USP39-205ENST00000442708 FXYD7P58549 80 aa11.7□□□□□ -0.54
USP39-205ENST00000442708 PDE6HQ13956 83 aa11.7□□□□□ -0.54
USP39-205ENST00000442708 AMTNQ6UX39 209 aa11.7□□□□□ -0.54
USP39-205ENST00000442708 C9orf62Q8N4C0 152 aa11.7□□□□□ -0.54
USP39-205ENST00000442708 OR8A1Q8NGG7 326 aa11.7□□□□□ -0.54
USP39-205ENST00000442708 RNF183Q96D59 192 aa11.7□□□□□ -0.54
USP39-205ENST00000442708 CLUHP3Q96NS8 147 aa11.7□□□□□ -0.54
USP39-205ENST00000442708 SLC35B3Q9H1N7 401 aa11.7□□□□□ -0.54
USP39-205ENST00000442708 CLEC5AQ9NY25 188 aa11.7□□□□□ -0.54
USP39-205ENST00000442708 ZFP69Q49AA0 526 aa11.69□□□□□ -0.54
USP39-205ENST00000442708 MORN3Q6PF18 240 aaPredicted RBP11.69□□□□□ -0.54
USP39-205ENST00000442708 CSNK1G2-AS1Q8NCQ2 148 aa11.69□□□□□ -0.54
USP39-205ENST00000442708 ACTR3CQ9C0K3 210 aaPredicted RBP11.69□□□□□ -0.54
USP39-205ENST00000442708 SPRY2O43597 315 aa11.68□□□□□ -0.54
USP39-205ENST00000442708 SEC11BP0C7V7 166 aa11.68□□□□□ -0.54
USP39-205ENST00000442708 FHITP49789 147 aa11.68□□□□□ -0.54
USP39-205ENST00000442708 NKX2-5P52952 324 aaPredicted RBP11.68□□□□□ -0.54
USP39-205ENST00000442708 PSG9Q00887 426 aa11.68□□□□□ -0.54
USP39-205ENST00000442708 HIST1H1AQ02539 215 aaPredicted RBP11.68□□□□□ -0.54
USP39-205ENST00000442708 ICAM4Q14773 271 aa11.68□□□□□ -0.54
USP39-205ENST00000442708 AKR1C8PQ5T2L2 129 aa11.68□□□□□ -0.54
USP39-205ENST00000442708 PQLC2Q6ZP29 291 aa11.68□□□□□ -0.54
USP39-205ENST00000442708 BAP18Q8IXM2 172 aa11.68□□□□□ -0.54
USP39-205ENST00000442708 STOML3Q8TAV4 291 aa11.68□□□□□ -0.54
USP39-205ENST00000442708 XCL2Q9UBD3 114 aa11.68□□□□□ -0.54
USP39-205ENST00000442708 GCHFRP30047 84 aa11.67□□□□□ -0.54
USP39-205ENST00000442708 RANP62826 216 aaKnown RBP11.67□□□□□ -0.54
USP39-205ENST00000442708 SUN5Q8TC36 379 aa11.67□□□□□ -0.54
USP39-205ENST00000442708 TMED6Q8WW62 240 aa11.67□□□□□ -0.54
USP39-205ENST00000442708 Q9H3A6 140 aa11.67□□□□□ -0.54
USP39-205ENST00000442708 TP53TG1Q9Y2A0 90 aa11.67□□□□□ -0.54
USP39-205ENST00000442708 CTXND1A0A1B0GTU2 59 aa11.66□□□□□ -0.54
USP39-205ENST00000442708 DUSP14O95147 198 aaKnown RBP11.66□□□□□ -0.54
USP39-205ENST00000442708 TPT1P13693 172 aaKnown RBP11.66□□□□□ -0.54
USP39-205ENST00000442708 MRPL53Q96EL3 112 aaKnown RBP11.66□□□□□ -0.54
USP39-205ENST00000442708 PRELID1Q9Y255 219 aa11.66□□□□□ -0.54
USP39-205ENST00000442708 M0R2Z0 102 aa11.65□□□□□ -0.54
USP39-205ENST00000442708 CXorf1O96002 111 aa11.65□□□□□ -0.54
USP39-205ENST00000442708 FGF8P55075 233 aaPredicted RBP11.65□□□□□ -0.54
USP39-205ENST00000442708 ERCC8Q13216 396 aa11.65□□□□□ -0.54
USP39-205ENST00000442708 TMPRSS5Q9H3S3 457 aa11.65□□□□□ -0.54
USP39-205ENST00000442708 AAMDCQ9H7C9 122 aa11.65□□□□□ -0.54
USP39-205ENST00000442708 IGKV2-40A0A087WW87 121 aaPredicted RBP11.64□□□□□ -0.55
USP39-205ENST00000442708 NPIPB6E9PJ23 425 aa11.64□□□□□ -0.55
USP39-205ENST00000442708 IGKV2D-40P01614 121 aaPredicted RBP11.64□□□□□ -0.55
USP39-205ENST00000442708 NUTF2P61970 127 aaKnown RBP11.64□□□□□ -0.55
USP39-205ENST00000442708 EIF5AP63241 154 aaKnown RBP11.64□□□□□ -0.55
USP39-205ENST00000442708 SPINK13Q1W4C9 94 aa11.64□□□□□ -0.55
USP39-205ENST00000442708 LYPD1Q8N2G4 141 aa11.64□□□□□ -0.55
USP39-205ENST00000442708 OR10J6PQ8NGY7 276 aa11.64□□□□□ -0.55
USP39-205ENST00000442708 EDA2RQ9HAV5 297 aa11.64□□□□□ -0.55
USP39-205ENST00000442708 PGPA6NDG6 321 aa11.63□□□□□ -0.55
USP39-205ENST00000442708 CRXO43186 299 aaPredicted RBP11.63□□□□□ -0.55
USP39-205ENST00000442708 CT45A10P0DMU9 189 aa11.63□□□□□ -0.55
USP39-205ENST00000442708 SLC51BQ86UW2 128 aa11.63□□□□□ -0.55
USP39-205ENST00000442708 OR11H2Q8NH07 326 aa11.63□□□□□ -0.55
USP39-205ENST00000442708 RARRES2Q99969 163 aa11.63□□□□□ -0.55
USP39-205ENST00000442708 VGLL1Q99990 258 aa11.63□□□□□ -0.55
USP39-205ENST00000442708 X6R8D5 127 aa11.63□□□□□ -0.55
USP39-205ENST00000442708 TRAV12-2A0A075B6T6 113 aa11.62□□□□□ -0.55
USP39-205ENST00000442708 MAP1LC3B2A6NCE7 125 aa11.62□□□□□ -0.55
USP39-205ENST00000442708 BOLA2-SMG1P6H3BVE0 249 aa11.62□□□□□ -0.55
USP39-205ENST00000442708 KIR3DS1Q14943 382 aa11.62□□□□□ -0.55
USP39-205ENST00000442708 C1orf158Q8N1D5 194 aa11.62□□□□□ -0.55
USP39-205ENST00000442708 FAM213BQ8TBF2 198 aa11.62□□□□□ -0.55
USP39-205ENST00000442708 C1QTNF4Q9BXJ3 329 aa11.62□□□□□ -0.55
USP39-205ENST00000442708 MAP1LC3BQ9GZQ8 125 aa11.62□□□□□ -0.55
USP39-205ENST00000442708 AGPAT4-IT1Q9H0P7 198 aa11.62□□□□□ -0.55
USP39-205ENST00000442708 OTORQ9NRC9 128 aa11.62□□□□□ -0.55
USP39-205ENST00000442708 BOLA1Q9Y3E2 137 aa11.62□□□□□ -0.55
USP39-205ENST00000442708 ZNF705EA8MWA4 302 aaPredicted RBP11.61□□□□□ -0.55
USP39-205ENST00000442708 UMAD1C9J7I0 102 aa11.61□□□□□ -0.55
USP39-205ENST00000442708 IQCF2Q8IXL9 164 aa11.61□□□□□ -0.55
USP39-205ENST00000442708 YTHDF2Q9Y5A9 579 aaKnown RBP11.61□□□□□ -0.55
USP39-205ENST00000442708 A0A0J9YWU9 116 aa11.6□□□□□ -0.55
USP39-205ENST00000442708 GGTLC3B5MD39 225 aa11.6□□□□□ -0.55
USP39-205ENST00000442708 DIRC3C9JPN6 131 aa11.6□□□□□ -0.55
USP39-205ENST00000442708 RBMY1A1P0DJD3 496 aaKnown RBP11.6□□□□□ -0.55
USP39-205ENST00000442708 RBMY1CP0DJD4 496 aa11.6□□□□□ -0.55
USP39-205ENST00000442708 GNG5P63218 68 aa11.6□□□□□ -0.55
USP39-205ENST00000442708 RBMY1FQ15415 496 aaKnown RBP11.6□□□□□ -0.55
USP39-205ENST00000442708 ZNF705AQ6ZN79 300 aaPredicted RBP11.6□□□□□ -0.55
USP39-205ENST00000442708 MBD3L1Q8WWY6 194 aa11.6□□□□□ -0.55
USP39-205ENST00000442708 FAM19A4Q96LR4 140 aa11.6□□□□□ -0.55
USP39-205ENST00000442708 IGF2BP2-AS1Q96M15 143 aa11.6□□□□□ -0.55
USP39-205ENST00000442708 TMEM167BQ9NRX6 74 aa11.6□□□□□ -0.55
USP39-205ENST00000442708 DEFB4AO15263 64 aa11.59□□□□□ -0.55
USP39-205ENST00000442708 DPPA3Q6W0C5 159 aa11.59□□□□□ -0.55
USP39-205ENST00000442708 C9orf47Q6ZRZ4 202 aa11.59□□□□□ -0.55
USP39-205ENST00000442708 Q8NAQ8 132 aa11.59□□□□□ -0.55
USP39-205ENST00000442708 WWC2-AS2Q96NR7 200 aa11.59□□□□□ -0.55
USP39-205ENST00000442708 PPP1R14DQ9NXH3 145 aa11.59□□□□□ -0.55
USP39-205ENST00000442708 RPH3ALQ9UNE2 315 aa11.59□□□□□ -0.55
USP39-205ENST00000442708 IGHV3OR16-12A0A075B7B8 117 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms