RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 NDUFA5Q16718 116 aa15.5■□□□□ 0.07
CHD3-204ENST00000439235 IGFL4Q6B9Z1 124 aa15.5■□□□□ 0.07
CHD3-204ENST00000439235 CCDC28AQ8IWP9 274 aa15.5■□□□□ 0.07
CHD3-204ENST00000439235 RNF182Q8N6D2 247 aa15.5■□□□□ 0.07
CHD3-204ENST00000439235 ZNF738Q8NE65 137 aa15.5■□□□□ 0.07
CHD3-204ENST00000439235 LINC00052Q96N35 136 aa15.5■□□□□ 0.07
CHD3-204ENST00000439235 ZNF256Q9Y2P7 627 aaPredicted RBP15.5■□□□□ 0.07
CHD3-204ENST00000439235 CMC4P56277 68 aaPredicted RBP15.49■□□□□ 0.07
CHD3-204ENST00000439235 CD81P60033 236 aa15.49■□□□□ 0.07
CHD3-204ENST00000439235 UQCC3Q6UW78 93 aa15.49■□□□□ 0.07
CHD3-204ENST00000439235 EPDR1Q9UM22 224 aa15.49■□□□□ 0.07
CHD3-204ENST00000439235 WNK1Q9H4A3 2382 aa15.48■□□□□ 0.07
CHD3-204ENST00000439235 M0R3E3 92 aa15.48■□□□□ 0.07
CHD3-204ENST00000439235 PSMG4Q5JS54 123 aa15.48■□□□□ 0.07
CHD3-204ENST00000439235 FAM24BQ8N5W8 94 aa15.48■□□□□ 0.07
CHD3-204ENST00000439235 HIST1H2BAQ96A08 127 aa15.48■□□□□ 0.07
CHD3-204ENST00000439235 C20orf173Q96LM9 149 aa15.48■□□□□ 0.07
CHD3-204ENST00000439235 TREM1Q9NP99 234 aa15.48■□□□□ 0.07
CHD3-204ENST00000439235 RPH3ALQ9UNE2 315 aa15.48■□□□□ 0.07
CHD3-204ENST00000439235 SERTM2A0A1B0GWG4 89 aa15.47■□□□□ 0.07
CHD3-204ENST00000439235 TMEM250H0YL14 139 aa15.47■□□□□ 0.07
CHD3-204ENST00000439235 PEX7O00628 323 aa15.47■□□□□ 0.07
CHD3-204ENST00000439235 GNG5P63218 68 aa15.47■□□□□ 0.07
CHD3-204ENST00000439235 BEAN1Q3B7T3 259 aa15.47■□□□□ 0.07
CHD3-204ENST00000439235 EIF4E3Q8N5X7 224 aaKnown RBP15.47■□□□□ 0.07
CHD3-204ENST00000439235 RPUSD4Q96CM3 377 aaKnown RBP15.47■□□□□ 0.07
CHD3-204ENST00000439235 ATG101Q9BSB4 218 aa15.47■□□□□ 0.07
CHD3-204ENST00000439235 SCO2A0A1W2PP80 73 aa15.46■□□□□ 0.07
CHD3-204ENST00000439235 K7EQM0 130 aa15.46■□□□□ 0.07
CHD3-204ENST00000439235 TCRAP04437 139 aa15.46■□□□□ 0.07
CHD3-204ENST00000439235 SRSF3P84103 164 aaKnown RBP15.46■□□□□ 0.07
CHD3-204ENST00000439235 CYB561D1Q8N8Q1 229 aa15.46■□□□□ 0.07
CHD3-204ENST00000439235 C11orf52Q96A22 123 aa15.46■□□□□ 0.07
CHD3-204ENST00000439235 MAP6D1Q9H9H5 199 aa15.46■□□□□ 0.07
CHD3-204ENST00000439235 ZMAT5Q9UDW3 170 aaKnown RBP15.46■□□□□ 0.07
CHD3-204ENST00000439235 ZNF705FA8MVS1 300 aaPredicted RBP15.45■□□□□ 0.06
CHD3-204ENST00000439235 DIRC3C9JPN6 131 aa15.45■□□□□ 0.06
CHD3-204ENST00000439235 SRP19P09132 144 aaKnown RBP15.45■□□□□ 0.06
CHD3-204ENST00000439235 AKR1C3P42330 323 aa15.45■□□□□ 0.06
CHD3-204ENST00000439235 FAM110AQ9BQ89 295 aa15.45■□□□□ 0.06
CHD3-204ENST00000439235 DEFB131AP59861 70 aa15.44■□□□□ 0.06
CHD3-204ENST00000439235 GOLT1AQ6ZVE7 132 aa15.44■□□□□ 0.06
CHD3-204ENST00000439235 RBAKDNA6NC62 111 aa15.43■□□□□ 0.06
CHD3-204ENST00000439235 OR11H12B2RN74 326 aa15.43■□□□□ 0.06
CHD3-204ENST00000439235 CNN1P51911 297 aaKnown RBP15.43■□□□□ 0.06
CHD3-204ENST00000439235 ODF3L2Q3SX64 289 aa15.43■□□□□ 0.06
CHD3-204ENST00000439235 OXLD1Q5BKU9 147 aa15.43■□□□□ 0.06
CHD3-204ENST00000439235 GTSCR1Q86UQ5 136 aa15.43■□□□□ 0.06
CHD3-204ENST00000439235 OR10J6PQ8NGY7 276 aa15.43■□□□□ 0.06
CHD3-204ENST00000439235 SLC35B3Q9H1N7 401 aa15.43■□□□□ 0.06
CHD3-204ENST00000439235 IGKV2-40A0A087WW87 121 aaPredicted RBP15.42■□□□□ 0.06
CHD3-204ENST00000439235 PRAC2D3DTV9 90 aa15.42■□□□□ 0.06
CHD3-204ENST00000439235 IGKV2D-40P01614 121 aaPredicted RBP15.42■□□□□ 0.06
CHD3-204ENST00000439235 EBLN2Q6P2I7 272 aa15.42■□□□□ 0.06
CHD3-204ENST00000439235 FOXI2Q6ZQN5 318 aa15.42■□□□□ 0.06
CHD3-204ENST00000439235 C2CD4CQ8TF44 421 aa15.42■□□□□ 0.06
CHD3-204ENST00000439235 FBLL1A6NHQ2 334 aaKnown RBP15.41■□□□□ 0.06
CHD3-204ENST00000439235 C9JQL5 133 aa15.41■□□□□ 0.06
CHD3-204ENST00000439235 S100A9P06702 114 aaKnown RBP15.41■□□□□ 0.06
CHD3-204ENST00000439235 CEBPGP53567 150 aa15.41■□□□□ 0.06
CHD3-204ENST00000439235 TMEM75Q8N9X5 138 aa15.41■□□□□ 0.06
CHD3-204ENST00000439235 OR8A1Q8NGG7 326 aa15.41■□□□□ 0.06
CHD3-204ENST00000439235 CD7P09564 240 aa15.4■□□□□ 0.06
CHD3-204ENST00000439235 UBE2G1P62253 170 aa15.4■□□□□ 0.06
CHD3-204ENST00000439235 EGFEM1PQ0D2K5 195 aa15.4■□□□□ 0.06
CHD3-204ENST00000439235 FMC1Q96HJ9 113 aa15.4■□□□□ 0.06
CHD3-204ENST00000439235 SAV1Q9H4B6 383 aaPredicted RBP15.4■□□□□ 0.06
CHD3-204ENST00000439235 A0A0J9YX75 114 aa15.39■□□□□ 0.05
CHD3-204ENST00000439235 DUSP14O95147 198 aaKnown RBP15.39■□□□□ 0.05
CHD3-204ENST00000439235 HIST1H1AQ02539 215 aaPredicted RBP15.39■□□□□ 0.05
CHD3-204ENST00000439235 SAMD5Q5TGI4 173 aa15.39■□□□□ 0.05
CHD3-204ENST00000439235 CITED4Q96RK1 184 aa15.39■□□□□ 0.05
CHD3-204ENST00000439235 PARLQ9H300 379 aa15.39■□□□□ 0.05
CHD3-204ENST00000439235 ANK2Q01484 3957 aa15.39■□□□□ 0.05
CHD3-204ENST00000439235 NPIPB6E9PJ23 425 aa15.38■□□□□ 0.05
CHD3-204ENST00000439235 F6UB75 175 aa15.38■□□□□ 0.05
CHD3-204ENST00000439235 SFTA3P0C7M3 94 aa15.38■□□□□ 0.05
CHD3-204ENST00000439235 PRB4P10163 310 aaPredicted RBP15.38■□□□□ 0.05
CHD3-204ENST00000439235 RPL35P42766 123 aaKnown RBP15.38■□□□□ 0.05
CHD3-204ENST00000439235 TAS2R60P59551 318 aa15.38■□□□□ 0.05
CHD3-204ENST00000439235 TMEM183BQ1AE95 376 aa15.38■□□□□ 0.05
CHD3-204ENST00000439235 TMEM78Q5T7P6 136 aa15.38■□□□□ 0.05
CHD3-204ENST00000439235 SLC7A5P1Q8MH63 180 aa15.38■□□□□ 0.05
CHD3-204ENST00000439235 KLF12Q9Y4X4 402 aa15.38■□□□□ 0.05
CHD3-204ENST00000439235 TRBV6-1A0A0K0K1D8 114 aa15.37■□□□□ 0.05
CHD3-204ENST00000439235 G3V4G9 280 aa15.37■□□□□ 0.05
CHD3-204ENST00000439235 DEFB1P60022 68 aa15.37■□□□□ 0.05
CHD3-204ENST00000439235 FLI1Q01543 452 aaPredicted RBP15.37■□□□□ 0.05
CHD3-204ENST00000439235 ZNF674Q2M3X9 581 aa15.37■□□□□ 0.05
CHD3-204ENST00000439235 SOHLH1Q5JUK2 328 aa15.37■□□□□ 0.05
CHD3-204ENST00000439235 C9orf47Q6ZRZ4 202 aa15.37■□□□□ 0.05
CHD3-204ENST00000439235 APRG1Q8IVJ8 170 aa15.37■□□□□ 0.05
CHD3-204ENST00000439235 LINC00477Q96M19 166 aa15.37■□□□□ 0.05
CHD3-204ENST00000439235 LINC00479Q96M42 142 aa15.37■□□□□ 0.05
CHD3-204ENST00000439235 VGLL1Q99990 258 aa15.37■□□□□ 0.05
CHD3-204ENST00000439235 DERL1Q9BUN8 251 aa15.37■□□□□ 0.05
CHD3-204ENST00000439235 TRAV8-1A0A0A6YYK1 113 aa15.36■□□□□ 0.05
CHD3-204ENST00000439235 TRAV34A0A0B4J273 112 aa15.36■□□□□ 0.05
CHD3-204ENST00000439235 TMEM218A2RU14 115 aa15.36■□□□□ 0.05
CHD3-204ENST00000439235 KNCNA6PVL3 124 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms