RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 PRNDQ9UKY0 176 aa7.02□□□□□ -1.29
CDC42BPA-206ENST00000429440 IGKV1OR2-108A0A075B7D4 117 aa7.02□□□□□ -1.29
CDC42BPA-206ENST00000429440 LGALS1P09382 135 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-206ENST00000429440 ZNF32P17041 273 aa7.02□□□□□ -1.29
CDC42BPA-206ENST00000429440 DLX6P56179 175 aa7.02□□□□□ -1.29
CDC42BPA-206ENST00000429440 TRPT1Q86TN4 253 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-206ENST00000429440 FXYD5Q96DB9 178 aa7.02□□□□□ -1.29
CDC42BPA-206ENST00000429440 DKK1O94907 266 aa7.01□□□□□ -1.29
CDC42BPA-206ENST00000429440 ERVK-16P61578 105 aa7.01□□□□□ -1.29
CDC42BPA-206ENST00000429440 POM121L12Q8N7R1 296 aa7.01□□□□□ -1.29
CDC42BPA-206ENST00000429440 ZNF714Q96N38 554 aa7.01□□□□□ -1.29
CDC42BPA-206ENST00000429440 FAM173AQ9BQD7 235 aa7.01□□□□□ -1.29
CDC42BPA-206ENST00000429440 MRPL20Q9BYC9 149 aaKnown RBP7.01□□□□□ -1.29
CDC42BPA-206ENST00000429440 ZNF785A8K8V0 405 aa7.01□□□□□ -1.29
CDC42BPA-206ENST00000429440 GNG5P63218 68 aa7.01□□□□□ -1.29
CDC42BPA-206ENST00000429440 EBI3Q14213 229 aa7.01□□□□□ -1.29
CDC42BPA-206ENST00000429440 UBALD1Q8TB05 177 aa7.01□□□□□ -1.29
CDC42BPA-206ENST00000429440 FSCN3Q9NQT6 498 aa7.01□□□□□ -1.29
CDC42BPA-206ENST00000429440 IGHV5-10-1A0A0J9YXX1 117 aa7□□□□□ -1.29
CDC42BPA-206ENST00000429440 LGALS9O00182 355 aa7□□□□□ -1.29
CDC42BPA-206ENST00000429440 PYYP10082 97 aa7□□□□□ -1.29
CDC42BPA-206ENST00000429440 CRYGAP11844 174 aa7□□□□□ -1.29
CDC42BPA-206ENST00000429440 PCBD1P61457 104 aa7□□□□□ -1.29
CDC42BPA-206ENST00000429440 PLGLB1Q02325 96 aa7□□□□□ -1.29
CDC42BPA-206ENST00000429440 ASCL5Q7RTU5 278 aa7□□□□□ -1.29
CDC42BPA-206ENST00000429440 IGFBPL1Q8WX77 278 aa7□□□□□ -1.29
CDC42BPA-206ENST00000429440 SCRG1O75711 98 aa7□□□□□ -1.29
CDC42BPA-206ENST00000429440 PLNP26678 52 aa7□□□□□ -1.29
CDC42BPA-206ENST00000429440 FXYD7P58549 80 aa7□□□□□ -1.29
CDC42BPA-206ENST00000429440 MORN5Q5VZ52 161 aa7□□□□□ -1.29
CDC42BPA-206ENST00000429440 NDUFA11Q86Y39 141 aa7□□□□□ -1.29
CDC42BPA-206ENST00000429440 SAP25Q8TEE9 199 aa7□□□□□ -1.29
CDC42BPA-206ENST00000429440 NTN5Q8WTR8 489 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-206ENST00000429440 ZNF837Q96EG3 531 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-206ENST00000429440 FOXC2Q99958 501 aa7□□□□□ -1.29
CDC42BPA-206ENST00000429440 TET2Q6N021 2002 aaPredicted RBP7□□□□□ -1.29
CDC42BPA-206ENST00000429440 TRAV40A0A0B4J280 105 aa6.99□□□□□ -1.29
CDC42BPA-206ENST00000429440 TRBV6-1A0A0K0K1D8 114 aa6.99□□□□□ -1.29
CDC42BPA-206ENST00000429440 PGPA6NDG6 321 aa6.99□□□□□ -1.29
CDC42BPA-206ENST00000429440 C15orf61A6NNL5 157 aa6.99□□□□□ -1.29
CDC42BPA-206ENST00000429440 GAGE2AQ6NT46 116 aa6.99□□□□□ -1.29
CDC42BPA-206ENST00000429440 ASCL2Q99929 193 aa6.99□□□□□ -1.29
CDC42BPA-206ENST00000429440 TMEM160Q9NX00 188 aa6.99□□□□□ -1.29
CDC42BPA-206ENST00000429440 SDK2Q58EX2 2172 aa6.99□□□□□ -1.29
CDC42BPA-206ENST00000429440 RBAKDNA6NC62 111 aa6.99□□□□□ -1.29
CDC42BPA-206ENST00000429440 MBD3L4A6NDZ8 208 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-206ENST00000429440 MBD3L3A6NE82 208 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-206ENST00000429440 MBD3L5A6NJ08 208 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-206ENST00000429440 K7EM74 188 aa6.99□□□□□ -1.29
CDC42BPA-206ENST00000429440 FOXF2Q12947 444 aa6.99□□□□□ -1.29
CDC42BPA-206ENST00000429440 MRPL14Q6P1L8 145 aaKnown RBP6.99□□□□□ -1.29
CDC42BPA-206ENST00000429440 PRO0628Q9UI54 55 aa6.99□□□□□ -1.29
CDC42BPA-206ENST00000429440 FOXA2Q9Y261 457 aaPredicted RBP6.99□□□□□ -1.29
CDC42BPA-206ENST00000429440 FAM236AA0A1B0GUQ0 79 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 FAM236BA0A1B0GV22 79 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 OOEPA6NGQ2 149 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 C12orf77C9JDV5 145 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 J3QLI3 93 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 COX7A2P2O60397 106 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 TCRAP04437 139 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 MRPL51Q4U2R6 128 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 WFDC3Q8IUB2 231 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 AMN1Q8IY45 258 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 SRSF12Q8WXF0 261 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 CFHR4Q92496 578 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 TMEM14BQ9NUH8 114 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 OCIAD1Q9NX40 245 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 TMEM30CPA0ZSE6 113 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 TM4SF5O14894 197 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 FCGR3BO75015 233 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 FSTL3O95633 263 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 CD3EP07766 207 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 HLA-DMBP28068 263 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 LEPP41159 167 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 TMEM155Q4W5P6 130 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 C10orf113Q5VZT2 155 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 DTX2Q86UW9 622 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 Q8IYB0 196 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 FLYWCH2Q96CP2 140 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 NXT2Q9NPJ8 142 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 MRPL35Q9NZE8 188 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 CNTRLQ7Z7A1 2325 aa6.98□□□□□ -1.29
CDC42BPA-206ENST00000429440 CELSR3Q9NYQ7 3312 aa6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 TRGV11A0A075B6L2 103 aa6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 TRAV3A0A0B4J244 114 aa6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 A0A0J9YW62 118 aa6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 NGFP01138 241 aa6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 COX7CP15954 63 aa6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 MALP21145 153 aa6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 PMVKQ15126 192 aa6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 SFTA2Q6UW10 78 aa6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 Q86TA4 180 aa6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 KLK5Q9Y337 293 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 COL27A1Q8IZC6 1860 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 CKS2P33552 79 aa6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 EFNA4P52798 201 aa6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 LINC00205P59089 165 aa6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 SEC61GP60059 68 aa6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 TMEM258P61165 79 aa6.97□□□□□ -1.29
CDC42BPA-206ENST00000429440 PMS2CLQ68D20 193 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms