RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 SERTM2A0A1B0GWG4 89 aa6.24□□□□□ -1.41
SMARCAL1-206ENST00000427645 K7EQM0 130 aa6.24□□□□□ -1.41
SMARCAL1-206ENST00000427645 NDUFB4O95168 129 aa6.24□□□□□ -1.41
SMARCAL1-206ENST00000427645 ID1P41134 155 aa6.24□□□□□ -1.41
SMARCAL1-206ENST00000427645 SRSF3P84103 164 aaKnown RBP6.24□□□□□ -1.41
SMARCAL1-206ENST00000427645 SOHLH1Q5JUK2 328 aa6.24□□□□□ -1.41
SMARCAL1-206ENST00000427645 KPRPQ5T749 579 aaPredicted RBP6.24□□□□□ -1.41
SMARCAL1-206ENST00000427645 FAM90A2PQ658T7 463 aa6.24□□□□□ -1.41
SMARCAL1-206ENST00000427645 RBPMS2Q6ZRY4 209 aaKnown RBP6.24□□□□□ -1.41
SMARCAL1-206ENST00000427645 C5orf17Q8NAS9 161 aa6.24□□□□□ -1.41
SMARCAL1-206ENST00000427645 DYNLRB2Q8TF09 96 aa6.24□□□□□ -1.41
SMARCAL1-206ENST00000427645 MRPL53Q96EL3 112 aaKnown RBP6.24□□□□□ -1.41
SMARCAL1-206ENST00000427645 SEC11CQ9BY50 192 aa6.24□□□□□ -1.41
SMARCAL1-206ENST00000427645 NRN1Q9NPD7 142 aa6.24□□□□□ -1.41
SMARCAL1-206ENST00000427645 ZNF331Q9NQX6 463 aaPredicted RBP6.24□□□□□ -1.41
SMARCAL1-206ENST00000427645 EPDR1Q9UM22 224 aa6.24□□□□□ -1.41
SMARCAL1-206ENST00000427645 TRAV2A0A0B4J234 112 aa6.23□□□□□ -1.41
SMARCAL1-206ENST00000427645 FBLL1A6NHQ2 334 aaKnown RBP6.23□□□□□ -1.41
SMARCAL1-206ENST00000427645 F8W036 122 aa6.23□□□□□ -1.41
SMARCAL1-206ENST00000427645 DNASE2O00115 360 aaPredicted RBP6.23□□□□□ -1.41
SMARCAL1-206ENST00000427645 ISLRO14498 428 aa6.23□□□□□ -1.41
SMARCAL1-206ENST00000427645 SLC25A5P05141 298 aaKnown RBP6.23□□□□□ -1.41
SMARCAL1-206ENST00000427645 ATP5G3P48201 142 aa6.23□□□□□ -1.41
SMARCAL1-206ENST00000427645 INSL3P51460 131 aa6.23□□□□□ -1.41
SMARCAL1-206ENST00000427645 DEFB114Q30KQ6 69 aa6.23□□□□□ -1.41
SMARCAL1-206ENST00000427645 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.23□□□□□ -1.41
SMARCAL1-206ENST00000427645 OR2K2Q8NGT1 345 aa6.23□□□□□ -1.41
SMARCAL1-206ENST00000427645 C16orf92Q96LL3 132 aa6.23□□□□□ -1.41
SMARCAL1-206ENST00000427645 C17orf77Q96MU5 243 aa6.23□□□□□ -1.41
SMARCAL1-206ENST00000427645 MCRIP2Q9BUT9 160 aaKnown RBP6.23□□□□□ -1.41
SMARCAL1-206ENST00000427645 AURKAIP1Q9NWT8 199 aaPredicted RBP6.23□□□□□ -1.41
SMARCAL1-206ENST00000427645 GGTLC3B5MD39 225 aa6.22□□□□□ -1.41
SMARCAL1-206ENST00000427645 C9JQL5 133 aa6.22□□□□□ -1.41
SMARCAL1-206ENST00000427645 H3BTX0 84 aa6.22□□□□□ -1.41
SMARCAL1-206ENST00000427645 TSPAN4O14817 238 aa6.22□□□□□ -1.41
SMARCAL1-206ENST00000427645 SNRPCP09234 159 aaKnown RBP6.22□□□□□ -1.41
SMARCAL1-206ENST00000427645 SFTA3P0C7M3 94 aa6.22□□□□□ -1.41
SMARCAL1-206ENST00000427645 CMC4P56277 68 aaPredicted RBP6.22□□□□□ -1.41
SMARCAL1-206ENST00000427645 TAS2R60P59551 318 aa6.22□□□□□ -1.41
SMARCAL1-206ENST00000427645 C10orf91Q5T1B1 145 aa6.22□□□□□ -1.41
SMARCAL1-206ENST00000427645 LCE2CQ5TA81 110 aa6.22□□□□□ -1.41
SMARCAL1-206ENST00000427645 LCN12Q6JVE5 192 aa6.22□□□□□ -1.41
SMARCAL1-206ENST00000427645 ADAMTSL5Q6ZMM2 481 aa6.22□□□□□ -1.41
SMARCAL1-206ENST00000427645 EXOC3-AS1Q8N2X6 119 aa6.22□□□□□ -1.41
SMARCAL1-206ENST00000427645 LINC00482Q8N8I6 264 aa6.22□□□□□ -1.41
SMARCAL1-206ENST00000427645 CYB561D1Q8N8Q1 229 aa6.22□□□□□ -1.41
SMARCAL1-206ENST00000427645 C11orf52Q96A22 123 aa6.22□□□□□ -1.41
SMARCAL1-206ENST00000427645 ATG101Q9BSB4 218 aa6.22□□□□□ -1.41
SMARCAL1-206ENST00000427645 ZNF727A8MUV8 499 aa6.21□□□□□ -1.42
SMARCAL1-206ENST00000427645 DIRC3C9JPN6 131 aa6.21□□□□□ -1.42
SMARCAL1-206ENST00000427645 SLC17A3O00476 420 aa6.21□□□□□ -1.42
SMARCAL1-206ENST00000427645 PEX7O00628 323 aa6.21□□□□□ -1.42
SMARCAL1-206ENST00000427645 ATP6V1G1O75348 118 aa6.21□□□□□ -1.42
SMARCAL1-206ENST00000427645 TCRAP04437 139 aa6.21□□□□□ -1.42
SMARCAL1-206ENST00000427645 IGLL1P15814 213 aa6.21□□□□□ -1.42
SMARCAL1-206ENST00000427645 CNN1P51911 297 aaKnown RBP6.21□□□□□ -1.42
SMARCAL1-206ENST00000427645 CEBPGP53567 150 aa6.21□□□□□ -1.42
SMARCAL1-206ENST00000427645 SNRPD3P62318 126 aaKnown RBP6.21□□□□□ -1.42
SMARCAL1-206ENST00000427645 PSG3Q16557 428 aa6.21□□□□□ -1.42
SMARCAL1-206ENST00000427645 TMEM241Q24JQ0 296 aa6.21□□□□□ -1.42
SMARCAL1-206ENST00000427645 SPAG8Q99932 426 aaPredicted RBP6.21□□□□□ -1.42
SMARCAL1-206ENST00000427645 NIPSNAP3BQ9BS92 247 aa6.21□□□□□ -1.42
SMARCAL1-206ENST00000427645 MS4A6AQ9H2W1 248 aa6.21□□□□□ -1.42
SMARCAL1-206ENST00000427645 KLF12Q9Y4X4 402 aa6.21□□□□□ -1.42
SMARCAL1-206ENST00000427645 TRAV8-2A0A0B4J237 113 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 TRBV6-1A0A0K0K1D8 114 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 SCO2A0A1W2PP80 73 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 RBAKDNA6NC62 111 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 OR4C46A6NHA9 309 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 C9JCJ5 164 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 K7EQG2 157 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 SOCS3O14543 225 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 SAP30O75446 220 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 EDN2P20800 178 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 AKR1C3P42330 323 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 UBE2G1P62253 170 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 PNRC1Q12796 327 aaPredicted RBP6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 TMEM183BQ1AE95 376 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 C9orf66Q5T8R8 295 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 WFDC9Q8NEX5 89 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 C2CD4CQ8TF44 421 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 DCANP1Q8TF63 244 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 SMIM12Q96EX1 92 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 FMC1Q96HJ9 113 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 SMIM7Q9BQ49 75 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 PARLQ9H300 379 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 NAT8Q9UHE5 227 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 CARHSP1Q9Y2V2 147 aaKnown RBP6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 LY96Q9Y6Y9 160 aa6.2□□□□□ -1.42
SMARCAL1-206ENST00000427645 IGKV3-7A0A075B6H7 116 aa6.19□□□□□ -1.42
SMARCAL1-206ENST00000427645 IGLV1-51P01701 117 aa6.19□□□□□ -1.42
SMARCAL1-206ENST00000427645 RPL35P42766 123 aaKnown RBP6.19□□□□□ -1.42
SMARCAL1-206ENST00000427645 GNG4P50150 75 aa6.19□□□□□ -1.42
SMARCAL1-206ENST00000427645 CD300EQ496F6 205 aaPredicted RBP6.19□□□□□ -1.42
SMARCAL1-206ENST00000427645 SAPCD1Q5SSQ6 148 aa6.19□□□□□ -1.42
SMARCAL1-206ENST00000427645 WFDC3Q8IUB2 231 aa6.19□□□□□ -1.42
SMARCAL1-206ENST00000427645 SVBPQ8N300 66 aa6.19□□□□□ -1.42
SMARCAL1-206ENST00000427645 GBGT1Q8N5D6 347 aa6.19□□□□□ -1.42
SMARCAL1-206ENST00000427645 TMEM75Q8N9X5 138 aa6.19□□□□□ -1.42
SMARCAL1-206ENST00000427645 TVP23CQ96ET8 276 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms