RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 OR10J1P30954 320 aa4.05□□□□□ -1.76
C9orf3-205ENST00000427193 NUP62P37198 522 aaPredicted RBP4.05□□□□□ -1.76
C9orf3-205ENST00000427193 NPBWR1P48145 328 aa4.05□□□□□ -1.76
C9orf3-205ENST00000427193 AP2S1P53680 142 aaPredicted RBP4.05□□□□□ -1.76
C9orf3-205ENST00000427193 TPPP2P59282 170 aa4.05□□□□□ -1.76
C9orf3-205ENST00000427193 SELENOTP62341 195 aa4.05□□□□□ -1.76
C9orf3-205ENST00000427193 SERF2P84101 59 aa4.05□□□□□ -1.76
C9orf3-205ENST00000427193 KLF5Q13887 457 aaPredicted RBP4.05□□□□□ -1.76
C9orf3-205ENST00000427193 PATE2Q6UY27 113 aa4.05□□□□□ -1.76
C9orf3-205ENST00000427193 IL34Q6ZMJ4 242 aa4.05□□□□□ -1.76
C9orf3-205ENST00000427193 GPHB5Q86YW7 130 aa4.05□□□□□ -1.76
C9orf3-205ENST00000427193 RPP25LQ8N5L8 163 aaKnown RBP4.05□□□□□ -1.76
C9orf3-205ENST00000427193 OR4X2Q8NGF9 303 aa4.05□□□□□ -1.76
C9orf3-205ENST00000427193 LYPD6BQ8NI32 183 aa4.05□□□□□ -1.76
C9orf3-205ENST00000427193 TMEM37Q8WXS4 190 aa4.05□□□□□ -1.76
C9orf3-205ENST00000427193 EEF1AKMT3Q96AZ1 226 aa4.05□□□□□ -1.76
C9orf3-205ENST00000427193 GNPNAT1Q96EK6 184 aaPredicted RBP4.05□□□□□ -1.76
C9orf3-205ENST00000427193 ACY3Q96HD9 319 aa4.05□□□□□ -1.76
C9orf3-205ENST00000427193 SLC35E1Q96K37 410 aa4.05□□□□□ -1.76
C9orf3-205ENST00000427193 RSG1Q9BU20 258 aa4.05□□□□□ -1.76
C9orf3-205ENST00000427193 SMIM3Q9BZL3 60 aa4.05□□□□□ -1.76
C9orf3-205ENST00000427193 SH3BGRL3Q9H299 93 aa4.05□□□□□ -1.76
C9orf3-205ENST00000427193 TECRQ9NZ01 308 aaKnown RBP4.05□□□□□ -1.76
C9orf3-205ENST00000427193 KIAA1109Q2LD37 5005 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 TRAV1-1A0A0B4J248 108 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 UBE2L5PA0A1B0GUS4 154 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 KANTRA0A1W2PQU2 76 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 OR2T8A6NH00 312 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 K7EMT4 169 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 LGALS9O00182 355 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 NDUFA4O00483 81 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 MRPS12O15235 138 aaKnown RBP4.04□□□□□ -1.76
C9orf3-205ENST00000427193 HSPB1P04792 205 aaKnown RBP4.04□□□□□ -1.76
C9orf3-205ENST00000427193 C8orf88P0DMB2 117 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 C4BPBP20851 252 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 GPR183P32249 361 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 CAMLGP49069 296 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 USF2Q15853 346 aaPredicted RBP4.04□□□□□ -1.76
C9orf3-205ENST00000427193 ZNF726P1Q15940 193 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 TIGITQ495A1 244 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 GCSAMLQ5JQS6 135 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 CASC10Q5T4H9 136 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 TEX261Q6UWH6 196 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 TOMM20LQ6UXN7 152 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 CLEC19AQ6UXS0 136 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 UNQ9165/PRO28630Q6UXU0 137 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 ADAMTSL5Q6ZMM2 481 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 CYP2G1PQ6ZSU1 146 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 NDUFA11Q86Y39 141 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 ZNF680Q8NEM1 530 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 FAM167A-AS1Q96KT0 104 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 B9D2Q9BPU9 175 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 ZNF471Q9BX82 626 aaPredicted RBP4.04□□□□□ -1.76
C9orf3-205ENST00000427193 RPRMQ9NS64 109 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 SLC39A9Q9NUM3 307 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 PEF1Q9UBV8 284 aaKnown RBP4.04□□□□□ -1.76
C9orf3-205ENST00000427193 TSSC4Q9Y5U2 329 aaPredicted RBP4.04□□□□□ -1.76
C9orf3-205ENST00000427193 S4R3C0 116 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 STARD9Q9P2P6 4700 aa4.04□□□□□ -1.76
C9orf3-205ENST00000427193 BORCS7-ASMTA0A0B4J1R7 106 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 TRAV34A0A0B4J273 112 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 TMEM213A2RRL7 107 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 UMAD1C9J7I0 102 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 PPP5D1E7EU14 171 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 K7EIL1 84 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 GNG7O60262 68 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 GGCTO75223 188 aaKnown RBP4.03□□□□□ -1.76
C9orf3-205ENST00000427193 IFNA5P01569 189 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 IGHV3-11P01762 117 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 IGHV3-23P01764 117 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 OR5G3P0C626 314 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 RD3LP0DJH9 198 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 TPT1P13693 172 aaKnown RBP4.03□□□□□ -1.76
C9orf3-205ENST00000427193 FGF7P21781 194 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 CRYBB3P26998 211 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 SULT1A2P50226 295 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 KRTAP12-2P59991 146 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 B2MP61769 119 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 EIF5AP63241 154 aaKnown RBP4.03□□□□□ -1.76
C9orf3-205ENST00000427193 AKR1C1Q04828 323 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 KRTAP13-3Q3SY46 172 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 MIC13Q5XKP0 118 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 ZNF600Q6ZNG1 722 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 SSX7Q7RTT5 188 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 HSD17B11Q8NBQ5 300 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 WFDC9Q8NEX5 89 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 OR51G1Q8NGK1 321 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 GATAD1Q8WUU5 269 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 MBD3L1Q8WWY6 194 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 SCRT1Q9BWW7 348 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 VSIRQ9H7M9 311 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 ZNF355PQ9NSJ1 428 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 SIGLEC8Q9NYZ4 499 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 PAIP2BQ9ULR5 123 aaKnown RBP4.03□□□□□ -1.76
C9orf3-205ENST00000427193 TP53TG3Q9ULZ0 132 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 PUS1Q9Y606 427 aaKnown RBP eCLIP4.03□□□□□ -1.76
C9orf3-205ENST00000427193 PXMP4Q9Y6I8 212 aa4.03□□□□□ -1.76
C9orf3-205ENST00000427193 IGLV9-49A0A0B4J1Y8 123 aa4.02□□□□□ -1.77
C9orf3-205ENST00000427193 ZFP92A6NM28 416 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms