RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 LGALS1P09382 135 aaKnown RBP11.96□□□□□ -0.49
SHOX2-202ENST00000425436 IGLC2P0DOY2 106 aa11.96□□□□□ -0.49
SHOX2-202ENST00000425436 FAM209BQ5JX69 171 aa11.96□□□□□ -0.49
SHOX2-202ENST00000425436 ZFP82Q8N141 532 aa11.96□□□□□ -0.49
SHOX2-202ENST00000425436 OR11H1Q8NG94 326 aa11.96□□□□□ -0.49
SHOX2-202ENST00000425436 GPR82Q96P67 336 aa11.96□□□□□ -0.49
SHOX2-202ENST00000425436 AURKAIP1Q9NWT8 199 aaPredicted RBP11.96□□□□□ -0.49
SHOX2-202ENST00000425436 IL36BQ9NZH7 164 aa11.96□□□□□ -0.49
SHOX2-202ENST00000425436 TRBV6-1A0A0K0K1D8 114 aa11.96□□□□□ -0.5
SHOX2-202ENST00000425436 CCL24O00175 119 aa11.96□□□□□ -0.5
SHOX2-202ENST00000425436 TRBV12-3P01733 135 aa11.96□□□□□ -0.5
SHOX2-202ENST00000425436 TCRAP04437 139 aa11.96□□□□□ -0.5
SHOX2-202ENST00000425436 GPR183P32249 361 aa11.96□□□□□ -0.5
SHOX2-202ENST00000425436 ADMP35318 185 aa11.96□□□□□ -0.5
SHOX2-202ENST00000425436 PSG9Q00887 426 aa11.96□□□□□ -0.5
SHOX2-202ENST00000425436 FAM231DQ6ZW35 169 aa11.96□□□□□ -0.5
SHOX2-202ENST00000425436 OR1N2Q8NGR9 330 aa11.96□□□□□ -0.5
SHOX2-202ENST00000425436 IGHV4OR15-8A0A075B7B6 117 aa11.95□□□□□ -0.5
SHOX2-202ENST00000425436 A0A087WW49 117 aa11.95□□□□□ -0.5
SHOX2-202ENST00000425436 SERTM2A0A1B0GWG4 89 aa11.95□□□□□ -0.5
SHOX2-202ENST00000425436 A0A1W2PPQ1 181 aa11.95□□□□□ -0.5
SHOX2-202ENST00000425436 MRPS12O15235 138 aaKnown RBP11.95□□□□□ -0.5
SHOX2-202ENST00000425436 PF4P02776 101 aa11.95□□□□□ -0.5
SHOX2-202ENST00000425436 C1orf194Q5T5A4 169 aa11.95□□□□□ -0.5
SHOX2-202ENST00000425436 ZNF414Q96IQ9 312 aa11.95□□□□□ -0.5
SHOX2-202ENST00000425436 C5orf52A6NGY3 159 aa11.94□□□□□ -0.5
SHOX2-202ENST00000425436 ZNF253O75346 499 aa11.94□□□□□ -0.5
SHOX2-202ENST00000425436 IGLV2-8P01709 118 aa11.94□□□□□ -0.5
SHOX2-202ENST00000425436 MGST1P10620 155 aaKnown RBP11.94□□□□□ -0.5
SHOX2-202ENST00000425436 RPEL1Q2QD12 228 aa11.94□□□□□ -0.5
SHOX2-202ENST00000425436 TOMM20LQ6UXN7 152 aa11.94□□□□□ -0.5
SHOX2-202ENST00000425436 CLEC19AQ6UXS0 136 aa11.94□□□□□ -0.5
SHOX2-202ENST00000425436 DPF1Q92782 380 aa11.94□□□□□ -0.5
SHOX2-202ENST00000425436 SAV1Q9H4B6 383 aaPredicted RBP11.94□□□□□ -0.5
SHOX2-202ENST00000425436 AAMDCQ9H7C9 122 aa11.94□□□□□ -0.5
SHOX2-202ENST00000425436 FBLL1A6NHQ2 334 aaKnown RBP11.93□□□□□ -0.5
SHOX2-202ENST00000425436 TRGC2P03986 189 aa11.93□□□□□ -0.5
SHOX2-202ENST00000425436 CSN1S1P47710 185 aa11.93□□□□□ -0.5
SHOX2-202ENST00000425436 MEOX2P50222 304 aa11.93□□□□□ -0.5
SHOX2-202ENST00000425436 COX19Q49B96 90 aa11.93□□□□□ -0.5
SHOX2-202ENST00000425436 IBA57Q5T440 356 aaKnown RBP11.93□□□□□ -0.5
SHOX2-202ENST00000425436 OR8I2Q8N0Y5 310 aa11.93□□□□□ -0.5
SHOX2-202ENST00000425436 CCDC140Q96MF4 163 aa11.93□□□□□ -0.5
SHOX2-202ENST00000425436 PEF1Q9UBV8 284 aaKnown RBP11.93□□□□□ -0.5
SHOX2-202ENST00000425436 V9GYV3 84 aa11.93□□□□□ -0.5
SHOX2-202ENST00000425436 SLURP1P55000 103 aa11.92□□□□□ -0.5
SHOX2-202ENST00000425436 PRR31Q5SQ13 230 aa11.92□□□□□ -0.5
SHOX2-202ENST00000425436 LINC00479Q96M42 142 aa11.92□□□□□ -0.5
SHOX2-202ENST00000425436 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.91□□□□□ -0.5
SHOX2-202ENST00000425436 ZNF320A2RRD8 509 aa11.91□□□□□ -0.5
SHOX2-202ENST00000425436 LINC01619G3V211 115 aa11.91□□□□□ -0.5
SHOX2-202ENST00000425436 LTAP01374 205 aa11.91□□□□□ -0.5
SHOX2-202ENST00000425436 SNRPEP62304 92 aaKnown RBP11.91□□□□□ -0.5
SHOX2-202ENST00000425436 GNG5P63218 68 aa11.91□□□□□ -0.5
SHOX2-202ENST00000425436 OR5I1Q13606 314 aa11.91□□□□□ -0.5
SHOX2-202ENST00000425436 SIGLEC15Q6ZMC9 328 aa11.91□□□□□ -0.5
SHOX2-202ENST00000425436 METTL26Q96S19 204 aa11.91□□□□□ -0.5
SHOX2-202ENST00000425436 ZFAND3Q9H8U3 227 aa11.91□□□□□ -0.5
SHOX2-202ENST00000425436 ZFP30Q9Y2G7 519 aa11.91□□□□□ -0.5
SHOX2-202ENST00000425436 UBE2CO00762 179 aa11.91□□□□□ -0.5
SHOX2-202ENST00000425436 SNRPCP09234 159 aaKnown RBP11.91□□□□□ -0.5
SHOX2-202ENST00000425436 FHL3Q13643 280 aa11.91□□□□□ -0.5
SHOX2-202ENST00000425436 LINC00482Q8N8I6 264 aa11.91□□□□□ -0.5
SHOX2-202ENST00000425436 TMEM75Q8N9X5 138 aa11.91□□□□□ -0.5
SHOX2-202ENST00000425436 A0A087X0K7 114 aa11.9□□□□□ -0.5
SHOX2-202ENST00000425436 TRAV34A0A0B4J273 112 aa11.9□□□□□ -0.5
SHOX2-202ENST00000425436 ZNF705GA8MUZ8 300 aaPredicted RBP11.9□□□□□ -0.5
SHOX2-202ENST00000425436 TMEM183AQ8IXX5 376 aa11.9□□□□□ -0.5
SHOX2-202ENST00000425436 EXOC3-AS1Q8N2X6 119 aa11.9□□□□□ -0.5
SHOX2-202ENST00000425436 GRAMD2BQ96HH9 432 aa11.9□□□□□ -0.5
SHOX2-202ENST00000425436 MLST8Q9BVC4 326 aa11.9□□□□□ -0.5
SHOX2-202ENST00000425436 ZNF492Q9P255 531 aa11.9□□□□□ -0.5
SHOX2-202ENST00000425436 H3BTX0 84 aa11.89□□□□□ -0.51
SHOX2-202ENST00000425436 SLC17A3O00476 420 aa11.89□□□□□ -0.51
SHOX2-202ENST00000425436 BUB3O43684 328 aa11.89□□□□□ -0.51
SHOX2-202ENST00000425436 GATCO43716 136 aaKnown RBP11.89□□□□□ -0.51
SHOX2-202ENST00000425436 HOXD3P31249 432 aaPredicted RBP11.89□□□□□ -0.51
SHOX2-202ENST00000425436 ARL3P36405 182 aa11.89□□□□□ -0.51
SHOX2-202ENST00000425436 DLX4Q92988 240 aaPredicted RBP11.89□□□□□ -0.51
SHOX2-202ENST00000425436 DAZAP1Q96EP5 407 aaKnown RBP11.89□□□□□ -0.51
SHOX2-202ENST00000425436 RNASE7Q9H1E1 156 aaKnown RBP11.89□□□□□ -0.51
SHOX2-202ENST00000425436 CLEC5AQ9NY25 188 aa11.89□□□□□ -0.51
SHOX2-202ENST00000425436 RPH3ALQ9UNE2 315 aa11.89□□□□□ -0.51
SHOX2-202ENST00000425436 SMIM27A0A1W2PRY6 76 aa11.88□□□□□ -0.51
SHOX2-202ENST00000425436 NDUFA4O00483 81 aa11.88□□□□□ -0.51
SHOX2-202ENST00000425436 PHOX2AO14813 284 aa11.88□□□□□ -0.51
SHOX2-202ENST00000425436 HIST1H2BKO60814 126 aa11.88□□□□□ -0.51
SHOX2-202ENST00000425436 HIST1H2BJP06899 126 aa11.88□□□□□ -0.51
SHOX2-202ENST00000425436 TRGC1P0CF51 173 aa11.88□□□□□ -0.51
SHOX2-202ENST00000425436 CD33P20138 364 aa11.88□□□□□ -0.51
SHOX2-202ENST00000425436 HIST1H2BOP23527 126 aa11.88□□□□□ -0.51
SHOX2-202ENST00000425436 HIST1H2BBP33778 126 aa11.88□□□□□ -0.51
SHOX2-202ENST00000425436 HIST1H2BDP58876 126 aa11.88□□□□□ -0.51
SHOX2-202ENST00000425436 HIST1H2BCP62807 126 aa11.88□□□□□ -0.51
SHOX2-202ENST00000425436 HIST2H2BEQ16778 126 aa11.88□□□□□ -0.51
SHOX2-202ENST00000425436 CT83Q5H943 113 aa11.88□□□□□ -0.51
SHOX2-202ENST00000425436 ACTL10Q5JWF8 245 aa11.88□□□□□ -0.51
SHOX2-202ENST00000425436 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.88□□□□□ -0.51
SHOX2-202ENST00000425436 HIST1H2BHQ93079 126 aa11.88□□□□□ -0.51
SHOX2-202ENST00000425436 HIST1H2BNQ99877 126 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms