RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-204	ENST00000420717	ZNF705F	A8MVS1	300 aa	Predicted RBP	10.47	□□□□□ -0.73
PTPN18-204	ENST00000420717	NPIPB6	E9PJ23	425 aa		10.47	□□□□□ -0.73
PTPN18-204	ENST00000420717	BOLA2-SMG1P6	H3BVE0	249 aa		10.47	□□□□□ -0.73
PTPN18-204	ENST00000420717	BCL2L11	O43521	198 aa		10.47	□□□□□ -0.73
PTPN18-204	ENST00000420717	SNRPC	P09234	159 aa	Known RBP	10.47	□□□□□ -0.73
PTPN18-204	ENST00000420717	ZNF705D	P0CH99	300 aa	Predicted RBP	10.47	□□□□□ -0.73
PTPN18-204	ENST00000420717	ZNF705B	P0CI00	300 aa	Predicted RBP	10.47	□□□□□ -0.73
PTPN18-204	ENST00000420717	STAG3L2	P0CL84	134 aa		10.47	□□□□□ -0.73
PTPN18-204	ENST00000420717	STAG3L3	P0CL85	134 aa		10.47	□□□□□ -0.73
PTPN18-204	ENST00000420717	CDC34	P49427	236 aa	Predicted RBP	10.47	□□□□□ -0.73
PTPN18-204	ENST00000420717		Q8NAQ8	132 aa		10.47	□□□□□ -0.73
PTPN18-204	ENST00000420717	OR11H2	Q8NH07	326 aa		10.47	□□□□□ -0.73
PTPN18-204	ENST00000420717	MUC7	Q8TAX7	377 aa		10.47	□□□□□ -0.73
PTPN18-204	ENST00000420717	PHYHIPL	Q96FC7	376 aa		10.47	□□□□□ -0.73
PTPN18-204	ENST00000420717	RARRES2	Q99969	163 aa		10.47	□□□□□ -0.73
PTPN18-204	ENST00000420717	SLC35B3	Q9H1N7	401 aa		10.47	□□□□□ -0.73
PTPN18-204	ENST00000420717		A0A1W2PPV4	95 aa		10.46	□□□□□ -0.73
PTPN18-204	ENST00000420717	PRAC2	D3DTV9	90 aa		10.46	□□□□□ -0.73
PTPN18-204	ENST00000420717	C3orf84	H3BNL1	204 aa		10.46	□□□□□ -0.73
PTPN18-204	ENST00000420717	CRX	O43186	299 aa	Predicted RBP	10.46	□□□□□ -0.73
PTPN18-204	ENST00000420717	C1QB	P02746	253 aa		10.46	□□□□□ -0.73
PTPN18-204	ENST00000420717	OR10J4	P0C629	311 aa		10.46	□□□□□ -0.73
PTPN18-204	ENST00000420717	MIF	P14174	115 aa		10.46	□□□□□ -0.73
PTPN18-204	ENST00000420717	HIST1H1A	Q02539	215 aa	Predicted RBP	10.46	□□□□□ -0.73
PTPN18-204	ENST00000420717	FAM122C	Q6P4D5	195 aa		10.46	□□□□□ -0.73
PTPN18-204	ENST00000420717	ARL6IP6	Q8N6S5	226 aa		10.46	□□□□□ -0.73
PTPN18-204	ENST00000420717	IGF2BP2-AS1	Q96M15	143 aa		10.46	□□□□□ -0.73
PTPN18-204	ENST00000420717	AAMDC	Q9H7C9	122 aa		10.46	□□□□□ -0.73
PTPN18-204	ENST00000420717	XCL2	Q9UBD3	114 aa		10.46	□□□□□ -0.73
PTPN18-204	ENST00000420717		M0R3E3	92 aa		10.45	□□□□□ -0.74
PTPN18-204	ENST00000420717	IGKV3-20	P01619	116 aa		10.45	□□□□□ -0.74
PTPN18-204	ENST00000420717	AKAP14	Q86UN6	197 aa		10.45	□□□□□ -0.74
PTPN18-204	ENST00000420717	OR10J6P	Q8NGY7	276 aa		10.45	□□□□□ -0.74
PTPN18-204	ENST00000420717	STOML3	Q8TAV4	291 aa		10.45	□□□□□ -0.74
PTPN18-204	ENST00000420717	BLNK	Q8WV28	456 aa		10.45	□□□□□ -0.74
PTPN18-204	ENST00000420717	RAB24	Q969Q5	203 aa		10.45	□□□□□ -0.74
PTPN18-204	ENST00000420717		A0A0J9YWU9	116 aa		10.44	□□□□□ -0.74
PTPN18-204	ENST00000420717	KANTR	A0A1W2PQU2	76 aa		10.44	□□□□□ -0.74
PTPN18-204	ENST00000420717	SEC11B	P0C7V7	166 aa		10.44	□□□□□ -0.74
PTPN18-204	ENST00000420717	ARL14EPL	P0DKL9	152 aa		10.44	□□□□□ -0.74
PTPN18-204	ENST00000420717	C9orf47	Q6ZRZ4	202 aa		10.44	□□□□□ -0.74
PTPN18-204	ENST00000420717	EXOC3-AS1	Q8N2X6	119 aa		10.44	□□□□□ -0.74
PTPN18-204	ENST00000420717	IL17D	Q8TAD2	202 aa		10.44	□□□□□ -0.74
PTPN18-204	ENST00000420717	FAM19A4	Q96LR4	140 aa		10.44	□□□□□ -0.74
PTPN18-204	ENST00000420717	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.44	□□□□□ -0.74
PTPN18-204	ENST00000420717	CTXND1	A0A1B0GTU2	59 aa		10.43	□□□□□ -0.74
PTPN18-204	ENST00000420717	RBAKDN	A6NC62	111 aa		10.43	□□□□□ -0.74
PTPN18-204	ENST00000420717	SMIM9	A6NGZ8	99 aa		10.43	□□□□□ -0.74
PTPN18-204	ENST00000420717	INS	P01308	110 aa		10.43	□□□□□ -0.74
PTPN18-204	ENST00000420717	SLC25A5	P05141	298 aa	Known RBP	10.43	□□□□□ -0.74
PTPN18-204	ENST00000420717	CDKN1B	P46527	198 aa		10.43	□□□□□ -0.74
PTPN18-204	ENST00000420717	EIF5A	P63241	154 aa	Known RBP	10.43	□□□□□ -0.74
PTPN18-204	ENST00000420717	ICAM4	Q14773	271 aa		10.43	□□□□□ -0.74
PTPN18-204	ENST00000420717	ZNF726P1	Q15940	193 aa		10.43	□□□□□ -0.74
PTPN18-204	ENST00000420717	TMUB2	Q71RG4	321 aa		10.43	□□□□□ -0.74
PTPN18-204	ENST00000420717	SSX7	Q7RTT5	188 aa		10.43	□□□□□ -0.74
PTPN18-204	ENST00000420717	HYLS1	Q96M11	299 aa		10.43	□□□□□ -0.74
PTPN18-204	ENST00000420717	C20orf144	Q9BQM9	153 aa		10.43	□□□□□ -0.74
PTPN18-204	ENST00000420717		Q9H3A6	140 aa		10.43	□□□□□ -0.74
PTPN18-204	ENST00000420717	OTOR	Q9NRC9	128 aa		10.43	□□□□□ -0.74
PTPN18-204	ENST00000420717	IGHV4-28	A0A0C4DH34	117 aa		10.42	□□□□□ -0.74
PTPN18-204	ENST00000420717	TRBV7-9	A0A0J9YWB2	115 aa		10.42	□□□□□ -0.74
PTPN18-204	ENST00000420717	CXorf1	O96002	111 aa		10.42	□□□□□ -0.74
PTPN18-204	ENST00000420717	SPINK13	Q1W4C9	94 aa		10.42	□□□□□ -0.74
PTPN18-204	ENST00000420717	C1orf158	Q8N1D5	194 aa		10.42	□□□□□ -0.74
PTPN18-204	ENST00000420717	PPP1R14D	Q9NXH3	145 aa		10.42	□□□□□ -0.74
PTPN18-204	ENST00000420717	GOLT1B	Q9Y3E0	138 aa		10.42	□□□□□ -0.74
PTPN18-204	ENST00000420717	STARD9	Q9P2P6	4700 aa		10.42	□□□□□ -0.74
PTPN18-204	ENST00000420717	UMAD1	C9J7I0	102 aa		10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717		M0R2Z0	102 aa		10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717	EIF3G	O75821	320 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717	NMB	P08949	121 aa		10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717	CT45A10	P0DMU9	189 aa		10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717	CRISP2	P16562	243 aa		10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717	GCHFR	P30047	84 aa		10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717	TSPO	P30536	169 aa		10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717	FXYD7	P58549	80 aa		10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717	LGALSL	Q3ZCW2	172 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717	AKR1C8P	Q5T2L2	129 aa		10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717	BAP18	Q8IXM2	172 aa		10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717	TMEM256	Q8N2U0	113 aa		10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717	RXFP4	Q8TDU9	374 aa		10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717	TMED6	Q8WW62	240 aa		10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717	LINC00477	Q96M19	166 aa		10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717	ZNF471	Q9BX82	626 aa	Predicted RBP	10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717	TMEM167B	Q9NRX6	74 aa		10.41	□□□□□ -0.74
PTPN18-204	ENST00000420717	hCG_2014768	A0A024R1R8	64 aa		10.4	□□□□□ -0.74
PTPN18-204	ENST00000420717	KLLN	B2CW77	178 aa		10.4	□□□□□ -0.74
PTPN18-204	ENST00000420717	PFDN1	O60925	122 aa		10.4	□□□□□ -0.74
PTPN18-204	ENST00000420717	RBMY1A1	P0DJD3	496 aa	Known RBP	10.4	□□□□□ -0.74
PTPN18-204	ENST00000420717	RBMY1C	P0DJD4	496 aa		10.4	□□□□□ -0.74
PTPN18-204	ENST00000420717	TPT1	P13693	172 aa	Known RBP	10.4	□□□□□ -0.74
PTPN18-204	ENST00000420717	LEP	P41159	167 aa		10.4	□□□□□ -0.74
PTPN18-204	ENST00000420717	RAN	P62826	216 aa	Known RBP	10.4	□□□□□ -0.74
PTPN18-204	ENST00000420717	RBMY1F	Q15415	496 aa	Known RBP	10.4	□□□□□ -0.74
PTPN18-204	ENST00000420717	CASC10	Q5T4H9	136 aa		10.4	□□□□□ -0.74
PTPN18-204	ENST00000420717	DPPA3	Q6W0C5	159 aa		10.4	□□□□□ -0.74
PTPN18-204	ENST00000420717	AGPAT4-IT1	Q9H0P7	198 aa		10.4	□□□□□ -0.74
PTPN18-204	ENST00000420717		A0A1B0GVG6	124 aa		10.39	□□□□□ -0.75
PTPN18-204	ENST00000420717	TMEM189	A5PLL7	270 aa		10.39	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms