RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 SMIM3Q9BZL3 60 aa9.47□□□□□ -0.89
LINC01398-201ENST00000416581 PPP1R14DQ9NXH3 145 aa9.47□□□□□ -0.89
LINC01398-201ENST00000416581 BOLA2-SMG1P6H3BVE0 249 aa9.46□□□□□ -0.9
LINC01398-201ENST00000416581 IFNA5P01569 189 aa9.46□□□□□ -0.9
LINC01398-201ENST00000416581 C1QBP02746 253 aa9.46□□□□□ -0.9
LINC01398-201ENST00000416581 CXCL2P19875 107 aa9.46□□□□□ -0.9
LINC01398-201ENST00000416581 FGF7P21781 194 aa9.46□□□□□ -0.9
LINC01398-201ENST00000416581 CAMLGP49069 296 aa9.46□□□□□ -0.9
LINC01398-201ENST00000416581 CCL18P55774 89 aa9.46□□□□□ -0.9
LINC01398-201ENST00000416581 ZNF345Q14585 488 aa9.46□□□□□ -0.9
LINC01398-201ENST00000416581 OPCMLQ14982 345 aa9.46□□□□□ -0.9
LINC01398-201ENST00000416581 PXDC1Q5TGL8 231 aa9.46□□□□□ -0.9
LINC01398-201ENST00000416581 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.46□□□□□ -0.9
LINC01398-201ENST00000416581 SHANK2-AS3Q9BTD1 123 aa9.46□□□□□ -0.9
LINC01398-201ENST00000416581 PARD6GQ9BYG4 376 aaPredicted RBP9.46□□□□□ -0.9
LINC01398-201ENST00000416581 WDR61Q9GZS3 305 aaKnown RBP9.46□□□□□ -0.9
LINC01398-201ENST00000416581 HIGD1AQ9Y241 93 aa9.46□□□□□ -0.9
LINC01398-201ENST00000416581 A0A087X0K7 114 aa9.45□□□□□ -0.9
LINC01398-201ENST00000416581 H3BRN7 92 aa9.45□□□□□ -0.9
LINC01398-201ENST00000416581 HYPMO75409 117 aa9.45□□□□□ -0.9
LINC01398-201ENST00000416581 ATP5G1P05496 136 aa9.45□□□□□ -0.9
LINC01398-201ENST00000416581 ATP5G3P48201 142 aa9.45□□□□□ -0.9
LINC01398-201ENST00000416581 TAS2R60P59551 318 aa9.45□□□□□ -0.9
LINC01398-201ENST00000416581 PLP1P60201 277 aa9.45□□□□□ -0.9
LINC01398-201ENST00000416581 ZNF266Q14584 549 aa9.45□□□□□ -0.9
LINC01398-201ENST00000416581 SPINK13Q1W4C9 94 aa9.45□□□□□ -0.9
LINC01398-201ENST00000416581 TMEM182Q6ZP80 229 aaPredicted RBP9.45□□□□□ -0.9
LINC01398-201ENST00000416581 ZNF493Q6ZR52 646 aa9.45□□□□□ -0.9
LINC01398-201ENST00000416581 ZNF738Q8NE65 137 aa9.45□□□□□ -0.9
LINC01398-201ENST00000416581 LRRC20Q8TCA0 184 aa9.45□□□□□ -0.9
LINC01398-201ENST00000416581 C16orf74Q96GX8 76 aa9.45□□□□□ -0.9
LINC01398-201ENST00000416581 HYLS1Q96M11 299 aa9.45□□□□□ -0.9
LINC01398-201ENST00000416581 C20orf144Q9BQM9 153 aa9.45□□□□□ -0.9
LINC01398-201ENST00000416581 NPCDR1Q9BY65 106 aa9.45□□□□□ -0.9
LINC01398-201ENST00000416581 SLC25A39Q9BZJ4 359 aaPredicted RBP9.45□□□□□ -0.9
LINC01398-201ENST00000416581 WFDC1Q9HC57 220 aa9.45□□□□□ -0.9
LINC01398-201ENST00000416581 NACAE9PAV3 2078 aa9.44□□□□□ -0.9
LINC01398-201ENST00000416581 A0A0D9SG52 128 aa9.44□□□□□ -0.9
LINC01398-201ENST00000416581 TAAR5O14804 337 aa9.44□□□□□ -0.9
LINC01398-201ENST00000416581 LINC00869P0C866 280 aa9.44□□□□□ -0.9
LINC01398-201ENST00000416581 GATA2P23769 480 aaPredicted RBP9.44□□□□□ -0.9
LINC01398-201ENST00000416581 RPL29P47914 159 aaKnown RBP9.44□□□□□ -0.9
LINC01398-201ENST00000416581 KCNRGQ8N5I3 272 aa9.44□□□□□ -0.9
LINC01398-201ENST00000416581 SCGB1C1Q8TD33 95 aa9.44□□□□□ -0.9
LINC01398-201ENST00000416581 C20orf173Q96LM9 149 aa9.44□□□□□ -0.9
LINC01398-201ENST00000416581 KCNIP2Q9NS61 270 aa9.44□□□□□ -0.9
LINC01398-201ENST00000416581 MUC4Q99102 2169 aa9.44□□□□□ -0.9
LINC01398-201ENST00000416581 CBY3A6NI87 242 aa9.43□□□□□ -0.9
LINC01398-201ENST00000416581 C17orf112F2Z3M2 114 aa9.43□□□□□ -0.9
LINC01398-201ENST00000416581 M0R2Z0 102 aa9.43□□□□□ -0.9
LINC01398-201ENST00000416581 CRXO43186 299 aaPredicted RBP9.43□□□□□ -0.9
LINC01398-201ENST00000416581 RHOBP62745 196 aa9.43□□□□□ -0.9
LINC01398-201ENST00000416581 CD300CQ08708 224 aa9.43□□□□□ -0.9
LINC01398-201ENST00000416581 LCN15Q6UWW0 184 aa9.43□□□□□ -0.9
LINC01398-201ENST00000416581 OR8A1Q8NGG7 326 aa9.43□□□□□ -0.9
LINC01398-201ENST00000416581 OR10J6PQ8NGY7 276 aa9.43□□□□□ -0.9
LINC01398-201ENST00000416581 SLC50A1Q9BRV3 221 aa9.43□□□□□ -0.9
LINC01398-201ENST00000416581 TIMM8BQ9Y5J9 83 aaPredicted RBP9.43□□□□□ -0.9
LINC01398-201ENST00000416581 PXMP4Q9Y6I8 212 aa9.43□□□□□ -0.9
LINC01398-201ENST00000416581 F5H768 121 aa9.42□□□□□ -0.9
LINC01398-201ENST00000416581 OR5G3P0C626 314 aa9.42□□□□□ -0.9
LINC01398-201ENST00000416581 DEFB130BP0DP73 79 aa9.42□□□□□ -0.9
LINC01398-201ENST00000416581 DEFB130AP0DP74 79 aa9.42□□□□□ -0.9
LINC01398-201ENST00000416581 HIST1H1AQ02539 215 aaPredicted RBP9.42□□□□□ -0.9
LINC01398-201ENST00000416581 TTC32Q5I0X7 151 aa9.42□□□□□ -0.9
LINC01398-201ENST00000416581 MIC13Q5XKP0 118 aa9.42□□□□□ -0.9
LINC01398-201ENST00000416581 Q6ZRG5 221 aa9.42□□□□□ -0.9
LINC01398-201ENST00000416581 LINC01587Q99440 93 aa9.42□□□□□ -0.9
LINC01398-201ENST00000416581 ARPC5LQ9BPX5 153 aa9.42□□□□□ -0.9
LINC01398-201ENST00000416581 ARL6Q9H0F7 186 aa9.42□□□□□ -0.9
LINC01398-201ENST00000416581 SLC39A9Q9NUM3 307 aa9.42□□□□□ -0.9
LINC01398-201ENST00000416581 BORCS7-ASMTA0A0B4J1R7 106 aa9.41□□□□□ -0.9
LINC01398-201ENST00000416581 TRAV8-2A0A0B4J237 113 aa9.41□□□□□ -0.9
LINC01398-201ENST00000416581 NBDYA0A0U1RRE5 68 aa9.41□□□□□ -0.9
LINC01398-201ENST00000416581 ZNF705GA8MUZ8 300 aaPredicted RBP9.41□□□□□ -0.9
LINC01398-201ENST00000416581 H7BYZ3 331 aa9.41□□□□□ -0.9
LINC01398-201ENST00000416581 BTF3P20290 206 aaKnown RBP9.41□□□□□ -0.9
LINC01398-201ENST00000416581 CDKN1BP46527 198 aa9.41□□□□□ -0.9
LINC01398-201ENST00000416581 PSG3Q16557 428 aa9.41□□□□□ -0.9
LINC01398-201ENST00000416581 ZFP69Q49AA0 526 aa9.41□□□□□ -0.9
LINC01398-201ENST00000416581 BAP18Q8IXM2 172 aa9.41□□□□□ -0.9
LINC01398-201ENST00000416581 C6orf223Q8N319 242 aa9.41□□□□□ -0.9
LINC01398-201ENST00000416581 OR1L4Q8NGR5 311 aa9.41□□□□□ -0.9
LINC01398-201ENST00000416581 TMEM263Q8WUH6 116 aaKnown RBP9.41□□□□□ -0.9
LINC01398-201ENST00000416581 ZNF503Q96F45 646 aa9.41□□□□□ -0.9
LINC01398-201ENST00000416581 PFDN5Q99471 154 aa9.41□□□□□ -0.9
LINC01398-201ENST00000416581 PLA2G2EQ9NZK7 142 aa9.41□□□□□ -0.9
LINC01398-201ENST00000416581 TIMM9Q9Y5J7 89 aa9.41□□□□□ -0.9
LINC01398-201ENST00000416581 KANTRA0A1W2PQU2 76 aa9.4□□□□□ -0.9
LINC01398-201ENST00000416581 COX7A2P2O60397 106 aa9.4□□□□□ -0.9
LINC01398-201ENST00000416581 NUDT3O95989 172 aa9.4□□□□□ -0.9
LINC01398-201ENST00000416581 RPL7L1Q6DKI1 246 aaKnown RBP9.4□□□□□ -0.9
LINC01398-201ENST00000416581 TMUB2Q71RG4 321 aa9.4□□□□□ -0.9
LINC01398-201ENST00000416581 CCDC28AQ8IWP9 274 aa9.4□□□□□ -0.9
LINC01398-201ENST00000416581 RNF182Q8N6D2 247 aa9.4□□□□□ -0.9
LINC01398-201ENST00000416581 ARV1Q9H2C2 271 aa9.4□□□□□ -0.9
LINC01398-201ENST00000416581 DNAJC4Q9NNZ3 241 aa9.4□□□□□ -0.9
LINC01398-201ENST00000416581 CYTL1Q9NRR1 136 aa9.4□□□□□ -0.9
LINC01398-201ENST00000416581 FAT2Q9NYQ8 4349 aa9.39□□□□□ -0.91
LINC01398-201ENST00000416581 BCL2L11O43521 198 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms