RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 C1RLQ9NZP8 487 aa6.61□□□□□ -1.35
SNX13-201ENST00000409076 HSPB8Q9UJY1 196 aa6.61□□□□□ -1.35
SNX13-201ENST00000409076 FAM71F2Q6NXP2 309 aa6.61□□□□□ -1.35
SNX13-201ENST00000409076 OR10AG1Q8NH19 301 aa6.61□□□□□ -1.35
SNX13-201ENST00000409076 ZNF414Q96IQ9 312 aa6.61□□□□□ -1.35
SNX13-201ENST00000409076 C2orf70A6NJV1 201 aa6.6□□□□□ -1.35
SNX13-201ENST00000409076 LHBP01229 141 aa6.6□□□□□ -1.35
SNX13-201ENST00000409076 LIPFP07098 398 aa6.6□□□□□ -1.35
SNX13-201ENST00000409076 OR4A5Q8NH83 315 aa6.6□□□□□ -1.35
SNX13-201ENST00000409076 CACNG8Q8WXS5 425 aa6.6□□□□□ -1.35
SNX13-201ENST00000409076 URB1-AS1Q96HZ7 61 aa6.6□□□□□ -1.35
SNX13-201ENST00000409076 G3V318 75 aa6.6□□□□□ -1.35
SNX13-201ENST00000409076 CRYBG3Q68DQ2 2970 aa6.6□□□□□ -1.35
SNX13-201ENST00000409076 MBD3L4A6NDZ8 208 aaPredicted RBP6.6□□□□□ -1.35
SNX13-201ENST00000409076 MBD3L3A6NE82 208 aaPredicted RBP6.6□□□□□ -1.35
SNX13-201ENST00000409076 MBD3L5A6NJ08 208 aaPredicted RBP6.6□□□□□ -1.35
SNX13-201ENST00000409076 LEPP41159 167 aa6.6□□□□□ -1.35
SNX13-201ENST00000409076 HIST2H2BDQ6DRA6 164 aa6.6□□□□□ -1.35
SNX13-201ENST00000409076 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.6□□□□□ -1.35
SNX13-201ENST00000409076 OR5AN1Q8NGI8 311 aa6.6□□□□□ -1.35
SNX13-201ENST00000409076 MBD3L2Q8NHZ7 208 aaPredicted RBP6.6□□□□□ -1.35
SNX13-201ENST00000409076 JKAMPQ9P055 326 aa6.6□□□□□ -1.35
SNX13-201ENST00000409076 GAGE12BA1L429 117 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 F5H697 171 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 SH2D1AO60880 128 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 NPYP01303 97 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 SPANXN1Q5VSR9 72 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 AMTNQ6UX39 209 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 C8orf46Q8TAG6 207 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 ZNF502Q8TBZ5 544 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 THBDP07204 575 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 CGB3P0DN86 165 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 CGB7P0DN87 165 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 MC5RP33032 325 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 CTRLP40313 264 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 RHOGP84095 191 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 BVES-AS1Q5T3Y7 98 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 ZNF833PQ6ZTB9 187 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 FAM57AQ8TBR7 257 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 LINC00477Q96M19 166 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 RABAC1Q9UI14 185 aa6.59□□□□□ -1.35
SNX13-201ENST00000409076 IGHV3-64A0A075B6Q5 118 aa6.59□□□□□ -1.36
SNX13-201ENST00000409076 LOC105371242A0A075B767 164 aa6.59□□□□□ -1.36
SNX13-201ENST00000409076 STXBP6Q8NFX7 210 aa6.59□□□□□ -1.36
SNX13-201ENST00000409076 FMC1Q96HJ9 113 aa6.59□□□□□ -1.36
SNX13-201ENST00000409076 CST9LQ9H4G1 147 aa6.59□□□□□ -1.36
SNX13-201ENST00000409076 ZNF883P0CG24 379 aa6.58□□□□□ -1.36
SNX13-201ENST00000409076 COX19Q49B96 90 aa6.58□□□□□ -1.36
SNX13-201ENST00000409076 BRD3OSQ6XYD6 125 aa6.58□□□□□ -1.36
SNX13-201ENST00000409076 FAM90A9PA6NNJ1 464 aa6.58□□□□□ -1.36
SNX13-201ENST00000409076 IGLV2-23P01705 113 aa6.58□□□□□ -1.36
SNX13-201ENST00000409076 IGLC1P0CG04 106 aa6.58□□□□□ -1.36
SNX13-201ENST00000409076 EFNA4P52798 201 aa6.58□□□□□ -1.36
SNX13-201ENST00000409076 TMEM97Q5BJF2 176 aa6.58□□□□□ -1.36
SNX13-201ENST00000409076 FAM74A4Q5TZK3 123 aa6.58□□□□□ -1.36
SNX13-201ENST00000409076 SIGLEC8Q9NYZ4 499 aa6.58□□□□□ -1.36
SNX13-201ENST00000409076 A1L4Q6 167 aa6.58□□□□□ -1.36
SNX13-201ENST00000409076 PRAC2D3DTV9 90 aa6.58□□□□□ -1.36
SNX13-201ENST00000409076 BUB1B-PAK6H3BSN5 160 aa6.58□□□□□ -1.36
SNX13-201ENST00000409076 IGKV1-17P01599 117 aa6.58□□□□□ -1.36
SNX13-201ENST00000409076 PLP1P60201 277 aa6.58□□□□□ -1.36
SNX13-201ENST00000409076 MEF2CQ06413 473 aaPredicted RBP6.58□□□□□ -1.36
SNX13-201ENST00000409076 ZNF672Q499Z4 452 aaPredicted RBP6.58□□□□□ -1.36
SNX13-201ENST00000409076 JMJD8Q96S16 334 aa6.58□□□□□ -1.36
SNX13-201ENST00000409076 SPCS1Q9Y6A9 102 aa6.58□□□□□ -1.36
SNX13-201ENST00000409076 TRAV9-1A0A075B6T8 112 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 C19orf67A6NJJ6 358 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 H3BVH4 76 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 TAX1BP3O14907 124 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 GP9P14770 177 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 KIR3DS1Q14943 382 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 PLA2G2CQ5R387 149 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 C12orf54Q6X4T0 127 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 FER1L6-AS1Q8NA97 138 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 WIPF2Q8TF74 440 aaPredicted RBP6.57□□□□□ -1.36
SNX13-201ENST00000409076 C21orf62Q9NYP8 219 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 TOMM40O96008 361 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 LGALS7P47929 136 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 NDFIP1Q9BT67 221 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 C19orf24Q9BVV8 132 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 GTSF1LQ9H1H1 148 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 OTORQ9NRC9 128 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 ACANP16112 2415 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 LOC107984156A0A0G2JMH3 177 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 IL17RELQ6ZVW7 336 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 ARL17AQ8IVW1 177 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 ORAOV1Q8WV07 137 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 IFI27L1Q96BM0 104 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 TIMD4Q96H15 378 aa6.57□□□□□ -1.36
SNX13-201ENST00000409076 PKD1L2Q7Z442 2459 aa6.56□□□□□ -1.36
SNX13-201ENST00000409076 SMAGPQ0VAQ4 97 aa6.56□□□□□ -1.36
SNX13-201ENST00000409076 MRPL51Q4U2R6 128 aaKnown RBP6.56□□□□□ -1.36
SNX13-201ENST00000409076 ORMDL3Q8N138 153 aa6.56□□□□□ -1.36
SNX13-201ENST00000409076 F6UB75 175 aa6.56□□□□□ -1.36
SNX13-201ENST00000409076 NBR2O15453 112 aa6.56□□□□□ -1.36
SNX13-201ENST00000409076 LTAP01374 205 aa6.56□□□□□ -1.36
SNX13-201ENST00000409076 EGR2P11161 476 aaPredicted RBP6.56□□□□□ -1.36
SNX13-201ENST00000409076 ZNF80P51504 273 aaPredicted RBP6.56□□□□□ -1.36
SNX13-201ENST00000409076 MFAP4P55083 255 aa6.56□□□□□ -1.36
SNX13-201ENST00000409076 MRPL27Q9P0M9 148 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 1948.8 ms