RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 C8orf49Q96NF6 230 aa11.17□□□□□ -0.62
HMGA2-204ENST00000403681 SHANK2-AS3Q9BTD1 123 aa11.17□□□□□ -0.62
HMGA2-204ENST00000403681 SPATA12Q7Z6I5 190 aa11.17□□□□□ -0.62
HMGA2-204ENST00000403681 TMEM190Q8WZ59 177 aa11.17□□□□□ -0.62
HMGA2-204ENST00000403681 XIRP2A4UGR9 3374 aa11.16□□□□□ -0.62
HMGA2-204ENST00000403681 TRAV40A0A0B4J280 105 aa11.16□□□□□ -0.62
HMGA2-204ENST00000403681 ZNF883P0CG24 379 aa11.16□□□□□ -0.62
HMGA2-204ENST00000403681 IGHV1-8P0DP01 117 aa11.16□□□□□ -0.62
HMGA2-204ENST00000403681 NPFFR1Q9GZQ6 430 aa11.16□□□□□ -0.62
HMGA2-204ENST00000403681 DPM3Q9P2X0 92 aa11.16□□□□□ -0.62
HMGA2-204ENST00000403681 HCFC1P51610 2035 aa11.16□□□□□ -0.62
HMGA2-204ENST00000403681 C10orf142B7Z368 130 aa11.16□□□□□ -0.62
HMGA2-204ENST00000403681 NPYP01303 97 aa11.16□□□□□ -0.62
HMGA2-204ENST00000403681 BSPH1Q075Z2 132 aa11.16□□□□□ -0.62
HMGA2-204ENST00000403681 DIAPH2-AS1Q14236 149 aa11.16□□□□□ -0.62
HMGA2-204ENST00000403681 TMEM8BA6NDV4 472 aa11.15□□□□□ -0.62
HMGA2-204ENST00000403681 NDUFS7O75251 213 aa11.15□□□□□ -0.62
HMGA2-204ENST00000403681 RAB9AP51151 201 aa11.15□□□□□ -0.62
HMGA2-204ENST00000403681 METTL26Q96S19 204 aa11.15□□□□□ -0.62
HMGA2-204ENST00000403681 KLF12Q9Y4X4 402 aa11.15□□□□□ -0.62
HMGA2-204ENST00000403681 G3V4G9 280 aa11.15□□□□□ -0.62
HMGA2-204ENST00000403681 LAGE3Q14657 143 aa11.15□□□□□ -0.62
HMGA2-204ENST00000403681 CREBBPQ92793 2442 aa11.15□□□□□ -0.62
HMGA2-204ENST00000403681 F8W1H4 67 aa11.15□□□□□ -0.62
HMGA2-204ENST00000403681 TNFRSF6BO95407 300 aa11.15□□□□□ -0.62
HMGA2-204ENST00000403681 TMEM170BQ5T4T1 132 aa11.15□□□□□ -0.62
HMGA2-204ENST00000403681 ZNF815PA8K554 130 aa11.15□□□□□ -0.63
HMGA2-204ENST00000403681 H3BMG7 143 aa11.15□□□□□ -0.63
HMGA2-204ENST00000403681 IGLV1-44P01699 117 aa11.15□□□□□ -0.63
HMGA2-204ENST00000403681 IGHG3P01860 377 aa11.15□□□□□ -0.63
HMGA2-204ENST00000403681 IGFL4Q6B9Z1 124 aa11.15□□□□□ -0.63
HMGA2-204ENST00000403681 TNFRSF14Q92956 283 aa11.15□□□□□ -0.63
HMGA2-204ENST00000403681 NPIPB6E9PJ23 425 aa11.14□□□□□ -0.63
HMGA2-204ENST00000403681 NBR2O15453 112 aa11.14□□□□□ -0.63
HMGA2-204ENST00000403681 LCNL1Q6ZST4 164 aa11.14□□□□□ -0.63
HMGA2-204ENST00000403681 CHTOPQ9Y3Y2 248 aaKnown RBP11.14□□□□□ -0.63
HMGA2-204ENST00000403681 IGHV1-3A0A0C4DH29 117 aa11.14□□□□□ -0.63
HMGA2-204ENST00000403681 LGALS3P17931 250 aaKnown RBP11.14□□□□□ -0.63
HMGA2-204ENST00000403681 SPRNQ5BIV9 151 aa11.14□□□□□ -0.63
HMGA2-204ENST00000403681 AMTNQ6UX39 209 aa11.14□□□□□ -0.63
HMGA2-204ENST00000403681 LINC00322Q6ZN03 302 aaPredicted RBP11.14□□□□□ -0.63
HMGA2-204ENST00000403681 ATP6V0BQ99437 205 aa11.14□□□□□ -0.63
HMGA2-204ENST00000403681 TIMM23O14925 209 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 CNTFRP26992 372 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 GATA4P43694 442 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 LYPD2Q6UXB3 125 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 OR10J6PQ8NGY7 276 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 ANAPC13Q9BS18 74 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 PRSS2P07478 247 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 ZNF562Q6V9R5 426 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 PGPEP1Q9NXJ5 209 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 TMEM14CQ9P0S9 112 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 PLXNB1O43157 2135 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 TMEM178BH3BS89 294 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 SPINK8P0C7L1 97 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 UTF1Q5T230 341 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 ARPC1AQ92747 370 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 C17orf77Q96MU5 243 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 BEX4Q9NWD9 120 aaPredicted RBP11.13□□□□□ -0.63
HMGA2-204ENST00000403681 MRPL36Q9P0J6 103 aaKnown RBP11.13□□□□□ -0.63
HMGA2-204ENST00000403681 VCX2Q9H322 139 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 UBTD1Q9HAC8 227 aa11.13□□□□□ -0.63
HMGA2-204ENST00000403681 C22orf46C9J442 243 aa11.12□□□□□ -0.63
HMGA2-204ENST00000403681 CRXO43186 299 aaPredicted RBP11.12□□□□□ -0.63
HMGA2-204ENST00000403681 GP9P14770 177 aa11.12□□□□□ -0.63
HMGA2-204ENST00000403681 ZNF474Q6S9Z5 364 aaPredicted RBP11.12□□□□□ -0.63
HMGA2-204ENST00000403681 BOD1L2Q8IYS8 172 aa11.12□□□□□ -0.63
HMGA2-204ENST00000403681 DLX4Q92988 240 aaPredicted RBP11.12□□□□□ -0.63
HMGA2-204ENST00000403681 E7EUB6 86 aa11.12□□□□□ -0.63
HMGA2-204ENST00000403681 PLNP26678 52 aa11.12□□□□□ -0.63
HMGA2-204ENST00000403681 KLRB1Q12918 225 aa11.12□□□□□ -0.63
HMGA2-204ENST00000403681 A8MWV9 139 aa11.11□□□□□ -0.63
HMGA2-204ENST00000403681 C1orf229Q6ZS94 237 aaPredicted RBP11.11□□□□□ -0.63
HMGA2-204ENST00000403681 C1orf159Q96HA4 380 aa11.11□□□□□ -0.63
HMGA2-204ENST00000403681 C19orf71A6NCJ1 209 aa11.11□□□□□ -0.63
HMGA2-204ENST00000403681 TRAV8-2A0A0B4J237 113 aa11.11□□□□□ -0.63
HMGA2-204ENST00000403681 PDE6HQ13956 83 aa11.11□□□□□ -0.63
HMGA2-204ENST00000403681 ORMDL2Q53FV1 153 aa11.11□□□□□ -0.63
HMGA2-204ENST00000403681 PRSS22Q9GZN4 317 aa11.11□□□□□ -0.63
HMGA2-204ENST00000403681 CEND1Q8N111 149 aa11.11□□□□□ -0.63
HMGA2-204ENST00000403681 LRP4O75096 1905 aa11.1□□□□□ -0.63
HMGA2-204ENST00000403681 LYNX1G3V0Z9 82 aa11.1□□□□□ -0.63
HMGA2-204ENST00000403681 LYNX1P0DP58 116 aa11.1□□□□□ -0.63
HMGA2-204ENST00000403681 KIR2DL4Q99706 377 aa11.1□□□□□ -0.63
HMGA2-204ENST00000403681 TTTY13Q9BZ97 58 aa11.1□□□□□ -0.63
HMGA2-204ENST00000403681 FXYD2P54710 66 aa11.1□□□□□ -0.63
HMGA2-204ENST00000403681 SH2D6Q7Z4S9 175 aa11.1□□□□□ -0.63
HMGA2-204ENST00000403681 GEMIN7Q9H840 131 aaKnown RBP11.1□□□□□ -0.63
HMGA2-204ENST00000403681 H7C1H1 209 aa11.1□□□□□ -0.63
HMGA2-204ENST00000403681 CR1LQ2VPA4 569 aa11.1□□□□□ -0.63
HMGA2-204ENST00000403681 RNASE6Q93091 150 aaKnown RBP11.1□□□□□ -0.63
HMGA2-204ENST00000403681 MRPL35Q9NZE8 188 aaKnown RBP11.1□□□□□ -0.63
HMGA2-204ENST00000403681 COX6CP09669 75 aa11.09□□□□□ -0.63
HMGA2-204ENST00000403681 FAM106CPP0CH98 169 aa11.09□□□□□ -0.63
HMGA2-204ENST00000403681 DNAH14Q0VDD8 3507 aa11.09□□□□□ -0.63
HMGA2-204ENST00000403681 PRR25Q96S07 402 aa11.09□□□□□ -0.63
HMGA2-204ENST00000403681 TRBV25-1A0A075B6N4 114 aa11.09□□□□□ -0.63
HMGA2-204ENST00000403681 TMEM262E9PQX1 116 aa11.09□□□□□ -0.63
HMGA2-204ENST00000403681 LHBP01229 141 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms