RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 CLUHP3Q96NS8 147 aa11.47□□□□□ -0.57
MBD1-207ENST00000398488 TP53TG1Q9Y2A0 90 aa11.47□□□□□ -0.57
MBD1-207ENST00000398488 A0A0D9SG52 128 aa11.46□□□□□ -0.57
MBD1-207ENST00000398488 C1QBP02746 253 aa11.46□□□□□ -0.57
MBD1-207ENST00000398488 PSG9Q00887 426 aa11.46□□□□□ -0.57
MBD1-207ENST00000398488 HIST1H1AQ02539 215 aaPredicted RBP11.46□□□□□ -0.57
MBD1-207ENST00000398488 RAB24Q969Q5 203 aa11.46□□□□□ -0.57
MBD1-207ENST00000398488 A0A1W2PPV4 95 aa11.45□□□□□ -0.58
MBD1-207ENST00000398488 CDC34P49427 236 aaPredicted RBP11.45□□□□□ -0.58
MBD1-207ENST00000398488 UBE2L3P68036 154 aaKnown RBP11.45□□□□□ -0.58
MBD1-207ENST00000398488 ICAM4Q14773 271 aa11.45□□□□□ -0.58
MBD1-207ENST00000398488 KHDC3LQ587J8 217 aa11.45□□□□□ -0.58
MBD1-207ENST00000398488 TMEM41BQ5BJD5 291 aa11.45□□□□□ -0.58
MBD1-207ENST00000398488 WWC2-AS2Q96NR7 200 aa11.45□□□□□ -0.58
MBD1-207ENST00000398488 M0R2Z0 102 aa11.45□□□□□ -0.58
MBD1-207ENST00000398488 STAG3L2P0CL84 134 aa11.45□□□□□ -0.58
MBD1-207ENST00000398488 STAG3L3P0CL85 134 aa11.45□□□□□ -0.58
MBD1-207ENST00000398488 ARL14EPLP0DKL9 152 aa11.45□□□□□ -0.58
MBD1-207ENST00000398488 PDE6HQ13956 83 aa11.45□□□□□ -0.58
MBD1-207ENST00000398488 OR11H2Q8NH07 326 aa11.45□□□□□ -0.58
MBD1-207ENST00000398488 ZNF471Q9BX82 626 aaPredicted RBP11.45□□□□□ -0.58
MBD1-207ENST00000398488 X6R8D5 127 aa11.45□□□□□ -0.58
MBD1-207ENST00000398488 CRXO43186 299 aaPredicted RBP11.44□□□□□ -0.58
MBD1-207ENST00000398488 DUSP14O95147 198 aaKnown RBP11.44□□□□□ -0.58
MBD1-207ENST00000398488 TAS2R45P59539 299 aa11.44□□□□□ -0.58
MBD1-207ENST00000398488 RANP62826 216 aaKnown RBP11.44□□□□□ -0.58
MBD1-207ENST00000398488 ERCC8Q13216 396 aa11.44□□□□□ -0.58
MBD1-207ENST00000398488 KIR3DS1Q14943 382 aa11.44□□□□□ -0.58
MBD1-207ENST00000398488 SPINK13Q1W4C9 94 aa11.44□□□□□ -0.58
MBD1-207ENST00000398488 RARRES2Q99969 163 aa11.44□□□□□ -0.58
MBD1-207ENST00000398488 A0A0J9YWU9 116 aa11.43□□□□□ -0.58
MBD1-207ENST00000398488 KANTRA0A1W2PQU2 76 aa11.43□□□□□ -0.58
MBD1-207ENST00000398488 DEFB4AO15263 64 aa11.43□□□□□ -0.58
MBD1-207ENST00000398488 MBP02144 154 aa11.43□□□□□ -0.58
MBD1-207ENST00000398488 FHITP49789 147 aa11.43□□□□□ -0.58
MBD1-207ENST00000398488 C1orf158Q8N1D5 194 aa11.43□□□□□ -0.58
MBD1-207ENST00000398488 ACTR3CQ9C0K3 210 aaPredicted RBP11.43□□□□□ -0.58
MBD1-207ENST00000398488 Q9H3A6 140 aa11.43□□□□□ -0.58
MBD1-207ENST00000398488 RBMY1A1P0DJD3 496 aaKnown RBP11.42□□□□□ -0.58
MBD1-207ENST00000398488 RBMY1CP0DJD4 496 aa11.42□□□□□ -0.58
MBD1-207ENST00000398488 CT45A10P0DMU9 189 aa11.42□□□□□ -0.58
MBD1-207ENST00000398488 NUTF2P61970 127 aaKnown RBP11.42□□□□□ -0.58
MBD1-207ENST00000398488 RBMY1FQ15415 496 aaKnown RBP11.42□□□□□ -0.58
MBD1-207ENST00000398488 PQLC2Q6ZP29 291 aa11.42□□□□□ -0.58
MBD1-207ENST00000398488 MRPL53Q96EL3 112 aaKnown RBP11.42□□□□□ -0.58
MBD1-207ENST00000398488 TMPRSS5Q9H3S3 457 aa11.42□□□□□ -0.58
MBD1-207ENST00000398488 STARD9Q9P2P6 4700 aa11.41□□□□□ -0.58
MBD1-207ENST00000398488 TRAV12-2A0A075B6T6 113 aa11.41□□□□□ -0.58
MBD1-207ENST00000398488 IGKV2-40A0A087WW87 121 aaPredicted RBP11.41□□□□□ -0.58
MBD1-207ENST00000398488 ZNF705EA8MWA4 302 aaPredicted RBP11.41□□□□□ -0.58
MBD1-207ENST00000398488 NPIPB6E9PJ23 425 aa11.41□□□□□ -0.58
MBD1-207ENST00000398488 PFDN1O60925 122 aa11.41□□□□□ -0.58
MBD1-207ENST00000398488 IGKV2D-40P01614 121 aaPredicted RBP11.41□□□□□ -0.58
MBD1-207ENST00000398488 PRM2P04554 102 aa11.41□□□□□ -0.58
MBD1-207ENST00000398488 GCHFRP30047 84 aa11.41□□□□□ -0.58
MBD1-207ENST00000398488 BAP18Q8IXM2 172 aa11.41□□□□□ -0.58
MBD1-207ENST00000398488 C9orf62Q8N4C0 152 aa11.41□□□□□ -0.58
MBD1-207ENST00000398488 SUN5Q8TC36 379 aa11.41□□□□□ -0.58
MBD1-207ENST00000398488 HYLS1Q96M11 299 aa11.41□□□□□ -0.58
MBD1-207ENST00000398488 NKX2-5P52952 324 aaPredicted RBP11.4□□□□□ -0.58
MBD1-207ENST00000398488 FGF8P55075 233 aaPredicted RBP11.4□□□□□ -0.58
MBD1-207ENST00000398488 AKR1C8PQ5T2L2 129 aa11.4□□□□□ -0.58
MBD1-207ENST00000398488 ZNF705AQ6ZN79 300 aaPredicted RBP11.4□□□□□ -0.58
MBD1-207ENST00000398488 Q8NAQ8 132 aa11.4□□□□□ -0.58
MBD1-207ENST00000398488 VGLL1Q99990 258 aa11.4□□□□□ -0.58
MBD1-207ENST00000398488 AGPAT4-IT1Q9H0P7 198 aa11.4□□□□□ -0.58
MBD1-207ENST00000398488 PRELID1Q9Y255 219 aa11.4□□□□□ -0.58
MBD1-207ENST00000398488 BOLA2-SMG1P6H3BVE0 249 aa11.4□□□□□ -0.59
MBD1-207ENST00000398488 SEC11BP0C7V7 166 aa11.4□□□□□ -0.59
MBD1-207ENST00000398488 OR10J6PQ8NGY7 276 aa11.4□□□□□ -0.59
MBD1-207ENST00000398488 TMED6Q8WW62 240 aa11.4□□□□□ -0.59
MBD1-207ENST00000398488 C1QTNF4Q9BXJ3 329 aa11.4□□□□□ -0.59
MBD1-207ENST00000398488 AAMDCQ9H7C9 122 aa11.4□□□□□ -0.59
MBD1-207ENST00000398488 IGHV3OR16-12A0A075B7B8 117 aa11.39□□□□□ -0.59
MBD1-207ENST00000398488 IGHV4-28A0A0C4DH34 117 aa11.39□□□□□ -0.59
MBD1-207ENST00000398488 CTXND1A0A1B0GTU2 59 aa11.39□□□□□ -0.59
MBD1-207ENST00000398488 PGPA6NDG6 321 aa11.39□□□□□ -0.59
MBD1-207ENST00000398488 STOML3Q8TAV4 291 aa11.39□□□□□ -0.59
MBD1-207ENST00000398488 IGF2BP2-AS1Q96M15 143 aa11.39□□□□□ -0.59
MBD1-207ENST00000398488 CSMD3Q7Z407 3707 aa11.38□□□□□ -0.59
MBD1-207ENST00000398488 CXorf1O96002 111 aa11.38□□□□□ -0.59
MBD1-207ENST00000398488 GNG5P63218 68 aa11.38□□□□□ -0.59
MBD1-207ENST00000398488 ZFP69Q49AA0 526 aa11.38□□□□□ -0.59
MBD1-207ENST00000398488 LYPD1Q8N2G4 141 aa11.38□□□□□ -0.59
MBD1-207ENST00000398488 OTORQ9NRC9 128 aa11.38□□□□□ -0.59
MBD1-207ENST00000398488 J3KRW8 73 aa11.37□□□□□ -0.59
MBD1-207ENST00000398488 FAM19A4Q96LR4 140 aa11.37□□□□□ -0.59
MBD1-207ENST00000398488 BOLA1Q9Y3E2 137 aa11.37□□□□□ -0.59
MBD1-207ENST00000398488 DYNC2H1Q8NCM8 4307 aaKnown RBP11.36□□□□□ -0.59
MBD1-207ENST00000398488 DIRC3C9JPN6 131 aa11.36□□□□□ -0.59
MBD1-207ENST00000398488 TPT1P13693 172 aaKnown RBP11.36□□□□□ -0.59
MBD1-207ENST00000398488 C9orf47Q6ZRZ4 202 aa11.36□□□□□ -0.59
MBD1-207ENST00000398488 Q8TAT8 98 aa11.36□□□□□ -0.59
MBD1-207ENST00000398488 MUC7Q8TAX7 377 aa11.36□□□□□ -0.59
MBD1-207ENST00000398488 PPP1R14DQ9NXH3 145 aa11.36□□□□□ -0.59
MBD1-207ENST00000398488 YTHDF2Q9Y5A9 579 aaKnown RBP11.36□□□□□ -0.59
MBD1-207ENST00000398488 MAP1LC3B2A6NCE7 125 aa11.35□□□□□ -0.59
MBD1-207ENST00000398488 GGTLC3B5MD39 225 aa11.35□□□□□ -0.59
MBD1-207ENST00000398488 CDKN1BP46527 198 aa11.35□□□□□ -0.59
MBD1-207ENST00000398488 PRR9Q5T870 116 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms