RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 OR51G1Q8NGK1 321 aa10.78□□□□□ -0.68
SEC13-208ENST00000397109 MAP6D1Q9H9H5 199 aa10.78□□□□□ -0.68
SEC13-208ENST00000397109 SEPSECSQ9HD40 501 aaKnown RBP10.78□□□□□ -0.68
SEC13-208ENST00000397109 RABAC1Q9UI14 185 aa10.78□□□□□ -0.68
SEC13-208ENST00000397109 TP53TG1Q9Y2A0 90 aa10.78□□□□□ -0.68
SEC13-208ENST00000397109 H3BQ15 152 aa10.77□□□□□ -0.69
SEC13-208ENST00000397109 GCSAMLQ5JQS6 135 aa10.77□□□□□ -0.69
SEC13-208ENST00000397109 CASC10Q5T4H9 136 aa10.77□□□□□ -0.69
SEC13-208ENST00000397109 C16orf54Q6UWD8 224 aa10.77□□□□□ -0.69
SEC13-208ENST00000397109 APRG1Q8IVJ8 170 aa10.77□□□□□ -0.69
SEC13-208ENST00000397109 IL17DQ8TAD2 202 aa10.77□□□□□ -0.69
SEC13-208ENST00000397109 C7orf77A4D0Y5 90 aa10.76□□□□□ -0.69
SEC13-208ENST00000397109 M0R036 132 aa10.76□□□□□ -0.69
SEC13-208ENST00000397109 ARL14EPLP0DKL9 152 aa10.76□□□□□ -0.69
SEC13-208ENST00000397109 RPL35AP18077 110 aaKnown RBP10.76□□□□□ -0.69
SEC13-208ENST00000397109 GCHFRP30047 84 aa10.76□□□□□ -0.69
SEC13-208ENST00000397109 USF2Q15853 346 aaPredicted RBP10.76□□□□□ -0.69
SEC13-208ENST00000397109 S100A7AQ86SG5 101 aa10.76□□□□□ -0.69
SEC13-208ENST00000397109 RNF125Q96EQ8 232 aa10.76□□□□□ -0.69
SEC13-208ENST00000397109 OVOL2Q9BRP0 275 aa10.76□□□□□ -0.69
SEC13-208ENST00000397109 TMPRSS5Q9H3S3 457 aa10.76□□□□□ -0.69
SEC13-208ENST00000397109 TMEM242Q9NWH2 141 aa10.76□□□□□ -0.69
SEC13-208ENST00000397109 CXorf65A6NEN9 183 aa10.75□□□□□ -0.69
SEC13-208ENST00000397109 C11orf94C9JXX5 98 aa10.75□□□□□ -0.69
SEC13-208ENST00000397109 K7EQG2 157 aa10.75□□□□□ -0.69
SEC13-208ENST00000397109 HMGB3O15347 200 aaKnown RBP10.75□□□□□ -0.69
SEC13-208ENST00000397109 PAGE4O60829 102 aa10.75□□□□□ -0.69
SEC13-208ENST00000397109 DEFB131AP59861 70 aa10.75□□□□□ -0.69
SEC13-208ENST00000397109 C15orf54Q8N8G6 183 aa10.75□□□□□ -0.69
SEC13-208ENST00000397109 GLMPQ8WWB7 406 aa10.75□□□□□ -0.69
SEC13-208ENST00000397109 RPS10P5Q9NQ39 176 aa10.75□□□□□ -0.69
SEC13-208ENST00000397109 ZNF727A8MUV8 499 aa10.74□□□□□ -0.69
SEC13-208ENST00000397109 SPRY2O43597 315 aa10.74□□□□□ -0.69
SEC13-208ENST00000397109 BUB3O43684 328 aa10.74□□□□□ -0.69
SEC13-208ENST00000397109 C10orf113Q5VZT2 155 aa10.74□□□□□ -0.69
SEC13-208ENST00000397109 TMEM37Q8WXS4 190 aa10.74□□□□□ -0.69
SEC13-208ENST00000397109 CSTL1Q9H114 145 aa10.74□□□□□ -0.69
SEC13-208ENST00000397109 SDF2L1Q9HCN8 221 aa10.74□□□□□ -0.69
SEC13-208ENST00000397109 NAT8Q9UHE5 227 aa10.74□□□□□ -0.69
SEC13-208ENST00000397109 FAM74A7A6NL05 159 aa10.74□□□□□ -0.69
SEC13-208ENST00000397109 COX7A2P2O60397 106 aa10.74□□□□□ -0.69
SEC13-208ENST00000397109 GATA2P23769 480 aaPredicted RBP10.74□□□□□ -0.69
SEC13-208ENST00000397109 ZNF124Q15973 351 aa10.74□□□□□ -0.69
SEC13-208ENST00000397109 TMEM241Q24JQ0 296 aa10.74□□□□□ -0.69
SEC13-208ENST00000397109 IQCF2Q8IXL9 164 aa10.74□□□□□ -0.69
SEC13-208ENST00000397109 DCANP1Q8TF63 244 aa10.74□□□□□ -0.69
SEC13-208ENST00000397109 UHRF2Q96PU4 802 aa10.74□□□□□ -0.69
SEC13-208ENST00000397109 DOK5Q9P104 306 aa10.74□□□□□ -0.69
SEC13-208ENST00000397109 RNF24Q9Y225 148 aa10.74□□□□□ -0.69
SEC13-208ENST00000397109 A0A1W2PRE2 83 aa10.73□□□□□ -0.69
SEC13-208ENST00000397109 DEFB135Q30KP9 77 aa10.73□□□□□ -0.69
SEC13-208ENST00000397109 SIGLEC15Q6ZMC9 328 aa10.73□□□□□ -0.69
SEC13-208ENST00000397109 MIR17HGQ75NE6 70 aa10.73□□□□□ -0.69
SEC13-208ENST00000397109 FAM24BQ8N5W8 94 aa10.73□□□□□ -0.69
SEC13-208ENST00000397109 RPUSD4Q96CM3 377 aaKnown RBP10.73□□□□□ -0.69
SEC13-208ENST00000397109 RNF183Q96D59 192 aa10.73□□□□□ -0.69
SEC13-208ENST00000397109 SMIM7Q9BQ49 75 aa10.73□□□□□ -0.69
SEC13-208ENST00000397109 TCEAL7Q9BRU2 100 aa10.73□□□□□ -0.69
SEC13-208ENST00000397109 CTDSP1Q9GZU7 261 aa10.73□□□□□ -0.69
SEC13-208ENST00000397109 S100A7P31151 101 aa10.72□□□□□ -0.69
SEC13-208ENST00000397109 CEBPGP53567 150 aa10.72□□□□□ -0.69
SEC13-208ENST00000397109 LYZP61626 148 aa10.72□□□□□ -0.69
SEC13-208ENST00000397109 C1orf194Q5T5A4 169 aa10.72□□□□□ -0.69
SEC13-208ENST00000397109 CST9LP1Q5W188 147 aa10.72□□□□□ -0.69
SEC13-208ENST00000397109 LEMD1Q68G75 181 aa10.72□□□□□ -0.69
SEC13-208ENST00000397109 ZFAND6Q6FIF0 208 aa10.72□□□□□ -0.69
SEC13-208ENST00000397109 STHQ8IWL8 128 aa10.72□□□□□ -0.69
SEC13-208ENST00000397109 NRN1Q9NPD7 142 aa10.72□□□□□ -0.69
SEC13-208ENST00000397109 HYPMO75409 117 aa10.71□□□□□ -0.69
SEC13-208ENST00000397109 ZNF688P0C7X2 276 aa10.71□□□□□ -0.69
SEC13-208ENST00000397109 SNRPD3P62318 126 aaKnown RBP10.71□□□□□ -0.69
SEC13-208ENST00000397109 RNF212Q495C1 297 aa10.71□□□□□ -0.69
SEC13-208ENST00000397109 TMEM88Q6PEY1 159 aa10.71□□□□□ -0.69
SEC13-208ENST00000397109 C11orf52Q96A22 123 aa10.71□□□□□ -0.69
SEC13-208ENST00000397109 PARLQ9H300 379 aa10.71□□□□□ -0.69
SEC13-208ENST00000397109 MT-ND4LP03901 98 aa10.7□□□□□ -0.7
SEC13-208ENST00000397109 SPATA31B1PQ5VZV4 182 aa10.7□□□□□ -0.7
SEC13-208ENST00000397109 PATE2Q6UY27 113 aa10.7□□□□□ -0.7
SEC13-208ENST00000397109 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.7□□□□□ -0.7
SEC13-208ENST00000397109 FAM167A-AS1Q96KT0 104 aa10.7□□□□□ -0.7
SEC13-208ENST00000397109 OR51M1Q9H341 326 aa10.7□□□□□ -0.7
SEC13-208ENST00000397109 LY96Q9Y6Y9 160 aa10.7□□□□□ -0.7
SEC13-208ENST00000397109 AGRNO00468 2067 aa10.7□□□□□ -0.7
SEC13-208ENST00000397109 KMT2CQ8NEZ4 4911 aaKnown RBP10.69□□□□□ -0.7
SEC13-208ENST00000397109 OR7C2O60412 319 aa10.69□□□□□ -0.7
SEC13-208ENST00000397109 ORM2P19652 201 aa10.69□□□□□ -0.7
SEC13-208ENST00000397109 LINC00305Q7Z4B0 112 aa10.69□□□□□ -0.7
SEC13-208ENST00000397109 CBLN2Q8IUK8 224 aa10.69□□□□□ -0.7
SEC13-208ENST00000397109 ANAPC16Q96DE5 110 aa10.69□□□□□ -0.7
SEC13-208ENST00000397109 ZNF503Q96F45 646 aa10.69□□□□□ -0.7
SEC13-208ENST00000397109 SLC25A2Q9BXI2 301 aa10.69□□□□□ -0.7
SEC13-208ENST00000397109 COLCA2A8K830 154 aa10.68□□□□□ -0.7
SEC13-208ENST00000397109 EIF3GO75821 320 aaKnown RBP eCLIP10.68□□□□□ -0.7
SEC13-208ENST00000397109 PSMG4Q5JS54 123 aa10.68□□□□□ -0.7
SEC13-208ENST00000397109 MORN3Q6PF18 240 aaPredicted RBP10.68□□□□□ -0.7
SEC13-208ENST00000397109 OR8I2Q8N0Y5 310 aa10.68□□□□□ -0.7
SEC13-208ENST00000397109 OR1B1Q8NGR6 318 aa10.68□□□□□ -0.7
SEC13-208ENST00000397109 PAXXQ9BUH6 204 aa10.68□□□□□ -0.7
SEC13-208ENST00000397109 HIGD1AQ9Y241 93 aa10.68□□□□□ -0.7
SEC13-208ENST00000397109 C9JCJ5 164 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms