RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 IGLC2P0DOY2 106 aa9.54□□□□□ -0.88
SCAF11-203ENST00000395453 HTN3P15516 51 aa9.54□□□□□ -0.88
SCAF11-203ENST00000395453 CAMLGP49069 296 aa9.54□□□□□ -0.88
SCAF11-203ENST00000395453 BCAP31P51572 246 aa9.54□□□□□ -0.88
SCAF11-203ENST00000395453 RHOBP62745 196 aa9.54□□□□□ -0.88
SCAF11-203ENST00000395453 RAB31Q13636 194 aa9.54□□□□□ -0.88
SCAF11-203ENST00000395453 OPCMLQ14982 345 aa9.54□□□□□ -0.88
SCAF11-203ENST00000395453 TMEM88Q6PEY1 159 aa9.54□□□□□ -0.88
SCAF11-203ENST00000395453 NRARPQ7Z6K4 114 aa9.54□□□□□ -0.88
SCAF11-203ENST00000395453 CHAC2Q8WUX2 184 aa9.54□□□□□ -0.88
SCAF11-203ENST00000395453 WDR83OSQ9Y284 106 aa9.54□□□□□ -0.88
SCAF11-203ENST00000395453 H3BQ15 152 aa9.53□□□□□ -0.88
SCAF11-203ENST00000395453 SLC17A3O00476 420 aa9.53□□□□□ -0.88
SCAF11-203ENST00000395453 SNRPCP09234 159 aaKnown RBP9.53□□□□□ -0.88
SCAF11-203ENST00000395453 PRB4P10163 310 aaPredicted RBP9.53□□□□□ -0.88
SCAF11-203ENST00000395453 S100A11P31949 105 aa9.53□□□□□ -0.88
SCAF11-203ENST00000395453 CDKN1BP46527 198 aa9.53□□□□□ -0.88
SCAF11-203ENST00000395453 CAV2P51636 162 aa9.53□□□□□ -0.88
SCAF11-203ENST00000395453 TAS2R60P59551 318 aa9.53□□□□□ -0.88
SCAF11-203ENST00000395453 MIC13Q5XKP0 118 aa9.53□□□□□ -0.88
SCAF11-203ENST00000395453 Q6ZR54 194 aa9.53□□□□□ -0.88
SCAF11-203ENST00000395453 Q6ZRG5 221 aa9.53□□□□□ -0.88
SCAF11-203ENST00000395453 LINC01587Q99440 93 aa9.53□□□□□ -0.88
SCAF11-203ENST00000395453 LYRM2Q9NU23 88 aaPredicted RBP9.53□□□□□ -0.88
SCAF11-203ENST00000395453 UQCC1Q9NVA1 299 aa9.53□□□□□ -0.88
SCAF11-203ENST00000395453 PPP1R14DQ9NXH3 145 aa9.53□□□□□ -0.88
SCAF11-203ENST00000395453 PXMP4Q9Y6I8 212 aa9.53□□□□□ -0.88
SCAF11-203ENST00000395453 HERC1Q15751 4861 aa9.53□□□□□ -0.88
SCAF11-203ENST00000395453 NACAE9PAV3 2078 aa9.52□□□□□ -0.89
SCAF11-203ENST00000395453 FAM240BA0A1B0GVZ2 78 aa9.52□□□□□ -0.89
SCAF11-203ENST00000395453 PRAC2D3DTV9 90 aa9.52□□□□□ -0.89
SCAF11-203ENST00000395453 PVALBP20472 110 aaPredicted RBP9.52□□□□□ -0.89
SCAF11-203ENST00000395453 RPL29P47914 159 aaKnown RBP9.52□□□□□ -0.89
SCAF11-203ENST00000395453 SULT1A1P50225 295 aa9.52□□□□□ -0.89
SCAF11-203ENST00000395453 TMEM252Q8N6L7 170 aa9.52□□□□□ -0.89
SCAF11-203ENST00000395453 C15orf53Q8NAA6 179 aa9.52□□□□□ -0.89
SCAF11-203ENST00000395453 TRAV5A0A0B4J249 113 aa9.51□□□□□ -0.89
SCAF11-203ENST00000395453 IGSF23A1L1A6 192 aa9.51□□□□□ -0.89
SCAF11-203ENST00000395453 CBY3A6NI87 242 aa9.51□□□□□ -0.89
SCAF11-203ENST00000395453 H3BTX0 84 aa9.51□□□□□ -0.89
SCAF11-203ENST00000395453 DEFB130BP0DP73 79 aa9.51□□□□□ -0.89
SCAF11-203ENST00000395453 DEFB130AP0DP74 79 aa9.51□□□□□ -0.89
SCAF11-203ENST00000395453 ASAH1Q13510 395 aa9.51□□□□□ -0.89
SCAF11-203ENST00000395453 RAB32Q13637 225 aa9.51□□□□□ -0.89
SCAF11-203ENST00000395453 KIR3DS1Q14943 382 aa9.51□□□□□ -0.89
SCAF11-203ENST00000395453 FCN2Q15485 313 aa9.51□□□□□ -0.89
SCAF11-203ENST00000395453 GUK1Q16774 197 aa9.51□□□□□ -0.89
SCAF11-203ENST00000395453 ZNF493Q6ZR52 646 aa9.51□□□□□ -0.89
SCAF11-203ENST00000395453 OR1L4Q8NGR5 311 aa9.51□□□□□ -0.89
SCAF11-203ENST00000395453 PFDN5Q99471 154 aa9.51□□□□□ -0.89
SCAF11-203ENST00000395453 C20orf144Q9BQM9 153 aa9.51□□□□□ -0.89
SCAF11-203ENST00000395453 C16orf90A8MZG2 172 aa9.5□□□□□ -0.89
SCAF11-203ENST00000395453 H7BYZ3 331 aa9.5□□□□□ -0.89
SCAF11-203ENST00000395453 ATP6V1FQ16864 119 aa9.5□□□□□ -0.89
SCAF11-203ENST00000395453 MZT2BQ6NZ67 158 aa9.5□□□□□ -0.89
SCAF11-203ENST00000395453 UBE2DNLQ8IWF7 75 aa9.5□□□□□ -0.89
SCAF11-203ENST00000395453 OR10J6PQ8NGY7 276 aa9.5□□□□□ -0.89
SCAF11-203ENST00000395453 RNASE8Q8TDE3 154 aaKnown RBP9.5□□□□□ -0.89
SCAF11-203ENST00000395453 S100ZQ8WXG8 99 aa9.5□□□□□ -0.89
SCAF11-203ENST00000395453 C16orf74Q96GX8 76 aa9.5□□□□□ -0.89
SCAF11-203ENST00000395453 SLC39A9Q9NUM3 307 aa9.5□□□□□ -0.89
SCAF11-203ENST00000395453 TIMM8BQ9Y5J9 83 aaPredicted RBP9.5□□□□□ -0.89
SCAF11-203ENST00000395453 IGLV2-18A0A075B6J9 118 aa9.49□□□□□ -0.89
SCAF11-203ENST00000395453 ZNF253O75346 499 aa9.49□□□□□ -0.89
SCAF11-203ENST00000395453 FAM3BP58499 235 aaPredicted RBP9.49□□□□□ -0.89
SCAF11-203ENST00000395453 S100A10P60903 97 aa9.49□□□□□ -0.89
SCAF11-203ENST00000395453 HBG1P69891 147 aa9.49□□□□□ -0.89
SCAF11-203ENST00000395453 HBG2P69892 147 aa9.49□□□□□ -0.89
SCAF11-203ENST00000395453 STX12Q86Y82 276 aa9.49□□□□□ -0.89
SCAF11-203ENST00000395453 TMEM263Q8WUH6 116 aaKnown RBP9.49□□□□□ -0.89
SCAF11-203ENST00000395453 ODF3Q96PU9 254 aa9.49□□□□□ -0.89
SCAF11-203ENST00000395453 ZNF586Q9NXT0 402 aa9.49□□□□□ -0.89
SCAF11-203ENST00000395453 UBE2L5PA0A1B0GUS4 154 aa9.48□□□□□ -0.89
SCAF11-203ENST00000395453 NPIPB6E9PJ23 425 aa9.48□□□□□ -0.89
SCAF11-203ENST00000395453 ATP5G1P05496 136 aa9.48□□□□□ -0.89
SCAF11-203ENST00000395453 CT45A10P0DMU9 189 aa9.48□□□□□ -0.89
SCAF11-203ENST00000395453 HTN1P15515 57 aa9.48□□□□□ -0.89
SCAF11-203ENST00000395453 ATP5G3P48201 142 aa9.48□□□□□ -0.89
SCAF11-203ENST00000395453 BAXQ07812 192 aa9.48□□□□□ -0.89
SCAF11-203ENST00000395453 C1orf134Q5TEV5 83 aa9.48□□□□□ -0.89
SCAF11-203ENST00000395453 GFI1BQ5VTD9 330 aa9.48□□□□□ -0.89
SCAF11-203ENST00000395453 Q8N1X5 172 aa9.48□□□□□ -0.89
SCAF11-203ENST00000395453 PARD6GQ9BYG4 376 aaPredicted RBP9.48□□□□□ -0.89
SCAF11-203ENST00000395453 TMEM14CQ9P0S9 112 aa9.48□□□□□ -0.89
SCAF11-203ENST00000395453 TRBV19A0A075B6N1 114 aa9.47□□□□□ -0.89
SCAF11-203ENST00000395453 F5H768 121 aa9.47□□□□□ -0.89
SCAF11-203ENST00000395453 MPDU1O75352 247 aa9.47□□□□□ -0.89
SCAF11-203ENST00000395453 FGF7P21781 194 aa9.47□□□□□ -0.89
SCAF11-203ENST00000395453 LINC00612Q8N6U2 182 aa9.47□□□□□ -0.89
SCAF11-203ENST00000395453 NOP10Q9NPE3 64 aaKnown RBP9.47□□□□□ -0.89
SCAF11-203ENST00000395453 NDUFB4O95168 129 aa9.46□□□□□ -0.9
SCAF11-203ENST00000395453 HIST1H1EP10412 219 aaKnown RBP9.46□□□□□ -0.9
SCAF11-203ENST00000395453 NHLH2Q02577 135 aa9.46□□□□□ -0.9
SCAF11-203ENST00000395453 PDE6HQ13956 83 aa9.46□□□□□ -0.9
SCAF11-203ENST00000395453 MRPL53Q96EL3 112 aaKnown RBP9.46□□□□□ -0.9
SCAF11-203ENST00000395453 NPCDR1Q9BY65 106 aa9.46□□□□□ -0.9
SCAF11-203ENST00000395453 GPN1Q9HCN4 374 aaPredicted RBP9.46□□□□□ -0.9
SCAF11-203ENST00000395453 LRP1BQ9NZR2 4599 aa9.46□□□□□ -0.9
SCAF11-203ENST00000395453 UPK1BO75841 260 aa9.45□□□□□ -0.9
SCAF11-203ENST00000395453 LEPP41159 167 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms