RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 TAX1BP3O14907 124 aa12.08□□□□□ -0.48
CCDC50-201ENST00000392455 VWA8A3KMH1 1905 aa12.08□□□□□ -0.48
CCDC50-201ENST00000392455 PROP1O75360 226 aa12.08□□□□□ -0.48
CCDC50-201ENST00000392455 IGLV3-21P80748 117 aaPredicted RBP12.08□□□□□ -0.48
CCDC50-201ENST00000392455 NSUN5P1Q3KNT7 163 aa12.08□□□□□ -0.48
CCDC50-201ENST00000392455 WDR83OSQ9Y284 106 aa12.08□□□□□ -0.48
CCDC50-201ENST00000392455 DENND4CQ5VZ89 1909 aa12.08□□□□□ -0.48
CCDC50-201ENST00000392455 A0A1W2PR77 199 aa12.08□□□□□ -0.48
CCDC50-201ENST00000392455 B4DSR2 109 aa12.08□□□□□ -0.48
CCDC50-201ENST00000392455 DEFB121Q5J5C9 76 aa12.08□□□□□ -0.48
CCDC50-201ENST00000392455 SH2D1AO60880 128 aa12.08□□□□□ -0.48
CCDC50-201ENST00000392455 TCF15Q12870 199 aa12.08□□□□□ -0.48
CCDC50-201ENST00000392455 Q6ZVH6 145 aa12.08□□□□□ -0.48
CCDC50-201ENST00000392455 ZMAT4Q9H898 229 aa12.08□□□□□ -0.48
CCDC50-201ENST00000392455 PDE6GP18545 87 aa12.07□□□□□ -0.48
CCDC50-201ENST00000392455 Q5BKY6 102 aa12.07□□□□□ -0.48
CCDC50-201ENST00000392455 ZNF474Q6S9Z5 364 aaPredicted RBP12.07□□□□□ -0.48
CCDC50-201ENST00000392455 LINC01551Q86U37 167 aa12.07□□□□□ -0.48
CCDC50-201ENST00000392455 BRK1Q8WUW1 75 aa12.07□□□□□ -0.48
CCDC50-201ENST00000392455 KIR2DL5BA0A0G2JN68 375 aa12.07□□□□□ -0.48
CCDC50-201ENST00000392455 KIR2DL5BA0A0G2JPC4 375 aa12.07□□□□□ -0.48
CCDC50-201ENST00000392455 LYL1P12980 280 aa12.07□□□□□ -0.48
CCDC50-201ENST00000392455 MRPL55Q7Z7F7 128 aaKnown RBP12.07□□□□□ -0.48
CCDC50-201ENST00000392455 KIR2DL5AQ8N109 375 aa12.07□□□□□ -0.48
CCDC50-201ENST00000392455 IGFBPL1Q8WX77 278 aa12.06□□□□□ -0.48
CCDC50-201ENST00000392455 VWC2Q2TAL6 325 aa12.06□□□□□ -0.48
CCDC50-201ENST00000392455 FAM104BQ5XKR9 115 aa12.06□□□□□ -0.48
CCDC50-201ENST00000392455 IGKV1D-43A0A0B4J1Z2 117 aa12.06□□□□□ -0.48
CCDC50-201ENST00000392455 GAGE12HA6NDE8 117 aa12.06□□□□□ -0.48
CCDC50-201ENST00000392455 PSG7Q13046 419 aa12.06□□□□□ -0.48
CCDC50-201ENST00000392455 RAMP3O60896 148 aa12.06□□□□□ -0.48
CCDC50-201ENST00000392455 PYYP10082 97 aa12.06□□□□□ -0.48
CCDC50-201ENST00000392455 CSPG4Q6UVK1 2322 aa12.06□□□□□ -0.48
CCDC50-201ENST00000392455 IGKV2-40A0A087WW87 121 aaPredicted RBP12.05□□□□□ -0.48
CCDC50-201ENST00000392455 IGKV2D-40P01614 121 aaPredicted RBP12.05□□□□□ -0.48
CCDC50-201ENST00000392455 Q0VG73 95 aa12.05□□□□□ -0.48
CCDC50-201ENST00000392455 C9orf106Q8NAJ2 232 aa12.05□□□□□ -0.48
CCDC50-201ENST00000392455 ID3Q02535 119 aa12.05□□□□□ -0.48
CCDC50-201ENST00000392455 PRSS47A8MTI9 375 aa12.05□□□□□ -0.48
CCDC50-201ENST00000392455 E9PLN8 166 aa12.05□□□□□ -0.48
CCDC50-201ENST00000392455 H0YIZ8 118 aa12.05□□□□□ -0.48
CCDC50-201ENST00000392455 FGF16O43320 207 aa12.05□□□□□ -0.48
CCDC50-201ENST00000392455 CD24P25063 80 aa12.05□□□□□ -0.48
CCDC50-201ENST00000392455 C3orf36Q3SXR2 165 aa12.05□□□□□ -0.48
CCDC50-201ENST00000392455 H0YGX0 51 aa12.05□□□□□ -0.48
CCDC50-201ENST00000392455 C14orf178Q8N769 122 aaPredicted RBP12.04□□□□□ -0.48
CCDC50-201ENST00000392455 AZU1P20160 251 aa12.04□□□□□ -0.48
CCDC50-201ENST00000392455 PCDH15Q96QU1 1955 aa12.04□□□□□ -0.48
CCDC50-201ENST00000392455 PRSS46E5RG02 174 aa12.04□□□□□ -0.48
CCDC50-201ENST00000392455 C20orf144Q9BQM9 153 aa12.04□□□□□ -0.48
CCDC50-201ENST00000392455 TCF20Q9UGU0 1960 aaKnown RBP12.04□□□□□ -0.48
CCDC50-201ENST00000392455 C3orf56Q8N813 242 aa12.04□□□□□ -0.48
CCDC50-201ENST00000392455 TICRRQ7Z2Z1 1910 aa12.04□□□□□ -0.48
CCDC50-201ENST00000392455 TREML4Q6UXN2 200 aa12.04□□□□□ -0.48
CCDC50-201ENST00000392455 KLHL30-AS1Q8NEE0 82 aa12.04□□□□□ -0.48
CCDC50-201ENST00000392455 CARD19Q96LW7 228 aa12.04□□□□□ -0.48
CCDC50-201ENST00000392455 TIMM23O14925 209 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 SLC25A16P16260 332 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 PIP4P2Q8N4L2 257 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 OTOGLQ3ZCN5 2332 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 IGHV2-26A0A0B4J1V2 119 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 PSPNO60542 156 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 C5orf64Q2M2E5 130 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 V9GYY9 64 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 ZNF319Q9P2F9 582 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 K7EP34 96 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 Q8N8P6 123 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 CFHR4Q92496 578 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 hDV102S1A0JD36 115 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 CEND1Q8N111 149 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 VSIRQ9H7M9 311 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 F5H768 121 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 CRIM1Q9NZV1 1036 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 TRAV40A0A0B4J280 105 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 K7EP13 123 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 PPIFP30405 207 aaKnown RBP12.03□□□□□ -0.48
CCDC50-201ENST00000392455 C11orf44Q8N8P7 122 aa12.03□□□□□ -0.48
CCDC50-201ENST00000392455 ZNF837Q96EG3 531 aaPredicted RBP12.03□□□□□ -0.48
CCDC50-201ENST00000392455 RNF222A6NCQ9 220 aa12.02□□□□□ -0.48
CCDC50-201ENST00000392455 VMO1Q7Z5L0 202 aa12.02□□□□□ -0.48
CCDC50-201ENST00000392455 ZNF492Q9P255 531 aa12.02□□□□□ -0.48
CCDC50-201ENST00000392455 WFDC12Q8WWY7 111 aa12.02□□□□□ -0.48
CCDC50-201ENST00000392455 IGHV3-73A0A0B4J1V6 119 aa12.02□□□□□ -0.49
CCDC50-201ENST00000392455 RPL35AP18077 110 aaKnown RBP12.02□□□□□ -0.49
CCDC50-201ENST00000392455 EFNA4P52798 201 aa12.02□□□□□ -0.49
CCDC50-201ENST00000392455 RNF126Q9BV68 326 aa12.02□□□□□ -0.49
CCDC50-201ENST00000392455 TP53TG1Q9Y2A0 90 aa12.02□□□□□ -0.49
CCDC50-201ENST00000392455 A0A1W2PPM0 123 aa12.02□□□□□ -0.49
CCDC50-201ENST00000392455 RNF152Q8N8N0 203 aa12.02□□□□□ -0.49
CCDC50-201ENST00000392455 RHOHQ15669 191 aa12.01□□□□□ -0.49
CCDC50-201ENST00000392455 LINC01620Q4KN68 170 aa12.01□□□□□ -0.49
CCDC50-201ENST00000392455 HGFACQ04756 655 aa12.01□□□□□ -0.49
CCDC50-201ENST00000392455 CRYBA4P53673 196 aa12.01□□□□□ -0.49
CCDC50-201ENST00000392455 F8VRH5 84 aa12.01□□□□□ -0.49
CCDC50-201ENST00000392455 EXOC3-AS1Q8N2X6 119 aa12.01□□□□□ -0.49
CCDC50-201ENST00000392455 DKK4Q9UBT3 224 aa12.01□□□□□ -0.49
CCDC50-201ENST00000392455 TFF1P04155 84 aa12.01□□□□□ -0.49
CCDC50-201ENST00000392455 PFN1P07737 140 aaKnown RBP12.01□□□□□ -0.49
CCDC50-201ENST00000392455 A0A0G2JMZ2 1700 aa12.01□□□□□ -0.49
CCDC50-201ENST00000392455 LRRC37A2A6NM11 1700 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms