RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 PHYHIPLQ96FC7 376 aa10.99□□□□□ -0.65
SUMO1-203ENST00000392246 TMEM167BQ9NRX6 74 aa10.99□□□□□ -0.65
SUMO1-203ENST00000392246 A0A0J9YX75 114 aa10.99□□□□□ -0.65
SUMO1-203ENST00000392246 MAP1LC3B2A6NCE7 125 aa10.99□□□□□ -0.65
SUMO1-203ENST00000392246 ZNF705FA8MVS1 300 aaPredicted RBP10.99□□□□□ -0.65
SUMO1-203ENST00000392246 F6UB75 175 aa10.99□□□□□ -0.65
SUMO1-203ENST00000392246 RANP62826 216 aaKnown RBP10.99□□□□□ -0.65
SUMO1-203ENST00000392246 ICAM4Q14773 271 aa10.99□□□□□ -0.65
SUMO1-203ENST00000392246 EXOC3-AS1Q8N2X6 119 aa10.99□□□□□ -0.65
SUMO1-203ENST00000392246 SUN5Q8TC36 379 aa10.99□□□□□ -0.65
SUMO1-203ENST00000392246 ASCL2Q99929 193 aa10.99□□□□□ -0.65
SUMO1-203ENST00000392246 MAP1LC3BQ9GZQ8 125 aa10.99□□□□□ -0.65
SUMO1-203ENST00000392246 DUSP14O95147 198 aaKnown RBP10.98□□□□□ -0.65
SUMO1-203ENST00000392246 SULT1A2P50226 295 aa10.98□□□□□ -0.65
SUMO1-203ENST00000392246 IQCF2Q8IXL9 164 aa10.98□□□□□ -0.65
SUMO1-203ENST00000392246 OR8A1Q8NGG7 326 aa10.98□□□□□ -0.65
SUMO1-203ENST00000392246 CLUHP3Q96NS8 147 aa10.98□□□□□ -0.65
SUMO1-203ENST00000392246 CSTL1Q9H114 145 aa10.98□□□□□ -0.65
SUMO1-203ENST00000392246 Q9H3A6 140 aa10.98□□□□□ -0.65
SUMO1-203ENST00000392246 BOLA2-SMG1P6H3BVE0 249 aa10.97□□□□□ -0.65
SUMO1-203ENST00000392246 UBE2CO00762 179 aa10.97□□□□□ -0.65
SUMO1-203ENST00000392246 FGF8P55075 233 aaPredicted RBP10.97□□□□□ -0.65
SUMO1-203ENST00000392246 MORN3Q6PF18 240 aaPredicted RBP10.97□□□□□ -0.65
SUMO1-203ENST00000392246 OR4B1Q8NGF8 309 aa10.97□□□□□ -0.65
SUMO1-203ENST00000392246 SFT2D1Q8WV19 159 aa10.97□□□□□ -0.65
SUMO1-203ENST00000392246 MBD3L1Q8WWY6 194 aa10.97□□□□□ -0.65
SUMO1-203ENST00000392246 M0R3E3 92 aa10.96□□□□□ -0.65
SUMO1-203ENST00000392246 H2AFB1P0C5Y9 115 aa10.96□□□□□ -0.65
SUMO1-203ENST00000392246 NHLRC4P0CG21 123 aaPredicted RBP10.96□□□□□ -0.65
SUMO1-203ENST00000392246 NUTF2P61970 127 aaKnown RBP10.96□□□□□ -0.65
SUMO1-203ENST00000392246 FAM74A1Q5RGS3 127 aa10.96□□□□□ -0.65
SUMO1-203ENST00000392246 OTORQ9NRC9 128 aa10.96□□□□□ -0.65
SUMO1-203ENST00000392246 PGPA6NDG6 321 aa10.95□□□□□ -0.66
SUMO1-203ENST00000392246 PRAC2D3DTV9 90 aa10.95□□□□□ -0.66
SUMO1-203ENST00000392246 IGKV3-20P01619 116 aa10.95□□□□□ -0.66
SUMO1-203ENST00000392246 ZNF705DP0CH99 300 aaPredicted RBP10.95□□□□□ -0.66
SUMO1-203ENST00000392246 ZNF705BP0CI00 300 aaPredicted RBP10.95□□□□□ -0.66
SUMO1-203ENST00000392246 CSN1S1P47710 185 aa10.95□□□□□ -0.66
SUMO1-203ENST00000392246 CNN1P51911 297 aaKnown RBP10.95□□□□□ -0.66
SUMO1-203ENST00000392246 HIST1H1AQ02539 215 aaPredicted RBP10.95□□□□□ -0.66
SUMO1-203ENST00000392246 OR10J6PQ8NGY7 276 aa10.95□□□□□ -0.66
SUMO1-203ENST00000392246 TMPRSS5Q9H3S3 457 aa10.95□□□□□ -0.66
SUMO1-203ENST00000392246 A8MTW9 85 aa10.94□□□□□ -0.66
SUMO1-203ENST00000392246 PRB4P10163 310 aaPredicted RBP10.94□□□□□ -0.66
SUMO1-203ENST00000392246 ALKAL2Q6UX46 152 aa10.94□□□□□ -0.66
SUMO1-203ENST00000392246 RXFP4Q8TDU9 374 aa10.94□□□□□ -0.66
SUMO1-203ENST00000392246 TM2D3Q9BRN9 247 aa10.94□□□□□ -0.66
SUMO1-203ENST00000392246 ZMAT4Q9H898 229 aa10.94□□□□□ -0.66
SUMO1-203ENST00000392246 A0A1W2PRE2 83 aa10.94□□□□□ -0.66
SUMO1-203ENST00000392246 CA1P00915 261 aaPredicted RBP10.94□□□□□ -0.66
SUMO1-203ENST00000392246 Q6ZWC4 215 aa10.94□□□□□ -0.66
SUMO1-203ENST00000392246 CMTM2Q8TAZ6 248 aa10.94□□□□□ -0.66
SUMO1-203ENST00000392246 SPATA25Q9BR10 227 aa10.94□□□□□ -0.66
SUMO1-203ENST00000392246 TEX46H3BTG2 121 aa10.93□□□□□ -0.66
SUMO1-203ENST00000392246 ARL6IP6Q8N6S5 226 aa10.93□□□□□ -0.66
SUMO1-203ENST00000392246 C1QTNF4Q9BXJ3 329 aa10.93□□□□□ -0.66
SUMO1-203ENST00000392246 PPP1R14DQ9NXH3 145 aa10.93□□□□□ -0.66
SUMO1-203ENST00000392246 DNAH9Q9NYC9 4486 aa10.92□□□□□ -0.66
SUMO1-203ENST00000392246 TRAV1-1A0A0B4J248 108 aa10.92□□□□□ -0.66
SUMO1-203ENST00000392246 A0A1B0GV50 99 aa10.92□□□□□ -0.66
SUMO1-203ENST00000392246 ZNF705EA8MWA4 302 aaPredicted RBP10.92□□□□□ -0.66
SUMO1-203ENST00000392246 GIG44P09565 113 aaPredicted RBP10.92□□□□□ -0.66
SUMO1-203ENST00000392246 AMTNQ6UX39 209 aa10.92□□□□□ -0.66
SUMO1-203ENST00000392246 NKX6-2Q9C056 277 aaPredicted RBP10.92□□□□□ -0.66
SUMO1-203ENST00000392246 SLC35B3Q9H1N7 401 aa10.92□□□□□ -0.66
SUMO1-203ENST00000392246 DIRC3C9JPN6 131 aa10.91□□□□□ -0.66
SUMO1-203ENST00000392246 NPIPB6E9PJ23 425 aa10.91□□□□□ -0.66
SUMO1-203ENST00000392246 HBE1P02100 147 aa10.91□□□□□ -0.66
SUMO1-203ENST00000392246 SLC25A5P05141 298 aaKnown RBP10.91□□□□□ -0.66
SUMO1-203ENST00000392246 UBE2G2P60604 165 aa10.91□□□□□ -0.66
SUMO1-203ENST00000392246 SUMO1P63165 101 aaKnown RBP10.91□□□□□ -0.66
SUMO1-203ENST00000392246 DEFB135Q30KP9 77 aa10.91□□□□□ -0.66
SUMO1-203ENST00000392246 LINC00477Q96M19 166 aa10.91□□□□□ -0.66
SUMO1-203ENST00000392246 TP53TG1Q9Y2A0 90 aa10.91□□□□□ -0.66
SUMO1-203ENST00000392246 IGKV2-40A0A087WW87 121 aaPredicted RBP10.9□□□□□ -0.66
SUMO1-203ENST00000392246 RBAKDNA6NC62 111 aa10.9□□□□□ -0.66
SUMO1-203ENST00000392246 FAM74A7A6NL05 159 aa10.9□□□□□ -0.66
SUMO1-203ENST00000392246 GGTLC3B5MD39 225 aa10.9□□□□□ -0.66
SUMO1-203ENST00000392246 IGKV2D-40P01614 121 aaPredicted RBP10.9□□□□□ -0.66
SUMO1-203ENST00000392246 PPT1P50897 306 aa10.9□□□□□ -0.66
SUMO1-203ENST00000392246 FXYD7P58549 80 aa10.9□□□□□ -0.66
SUMO1-203ENST00000392246 ERCC8Q13216 396 aa10.9□□□□□ -0.66
SUMO1-203ENST00000392246 C9orf47Q6ZRZ4 202 aa10.9□□□□□ -0.66
SUMO1-203ENST00000392246 C5orf17Q8NAS9 161 aa10.9□□□□□ -0.66
SUMO1-203ENST00000392246 RNF183Q96D59 192 aa10.9□□□□□ -0.66
SUMO1-203ENST00000392246 RCHY1Q96PM5 261 aa10.9□□□□□ -0.66
SUMO1-203ENST00000392246 XCL2Q9UBD3 114 aa10.9□□□□□ -0.66
SUMO1-203ENST00000392246 YTHDF2Q9Y5A9 579 aaKnown RBP10.9□□□□□ -0.66
SUMO1-203ENST00000392246 ARL2-SNX15V9GYD0 113 aa10.9□□□□□ -0.66
SUMO1-203ENST00000392246 SPRY2O43597 315 aa10.89□□□□□ -0.67
SUMO1-203ENST00000392246 AMBPP02760 352 aa10.89□□□□□ -0.67
SUMO1-203ENST00000392246 CT45A10P0DMU9 189 aa10.89□□□□□ -0.67
SUMO1-203ENST00000392246 BLOC1S1P78537 153 aa10.89□□□□□ -0.67
SUMO1-203ENST00000392246 TMEM78Q5T7P6 136 aa10.89□□□□□ -0.67
SUMO1-203ENST00000392246 ODF3Q96PU9 254 aa10.89□□□□□ -0.67
SUMO1-203ENST00000392246 VGLL1Q99990 258 aa10.89□□□□□ -0.67
SUMO1-203ENST00000392246 OVOL2Q9BRP0 275 aa10.89□□□□□ -0.67
SUMO1-203ENST00000392246 AGPAT4-IT1Q9H0P7 198 aa10.89□□□□□ -0.67
SUMO1-203ENST00000392246 RPH3ALQ9UNE2 315 aa10.89□□□□□ -0.67
SUMO1-203ENST00000392246 TSPOP30536 169 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 377.3 ms