RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 hCG_1818297A0A087WSY0 165 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 A8MT66 165 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 K7EQZ3 153 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 PIAS1O75925 651 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 APOEP02649 317 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 C8orf88P0DMB2 117 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 HLA-EP13747 358 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 TCL1AP56279 114 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 UBE2BP63146 152 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 DIAPH2-AS1Q14236 149 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 VMA21Q3ZAQ7 101 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 LYRM7Q5U5X0 104 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 HACD4Q5VWC8 232 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 CSAG1Q6PB30 78 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 GOLT1AQ6ZVE7 132 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 DEFB132Q7Z7B7 95 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 SLC25A40Q8TBP6 338 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 RAB8BQ92930 207 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 C7orf50Q9BRJ6 194 aaKnown RBP-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 SIKE1Q9BRV8 207 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 DRC3Q9H069 523 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 CST11Q9H112 138 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 ENY2Q9NPA8 101 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 AGPAT3Q9NRZ7 376 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 PLEKHJ1Q9NW61 149 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 LSM5Q9Y4Y9 91 aaKnown RBP-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 MYO7BQ6PIF6 2116 aa-0.67□□□□□ -2.52
SNORD28-201ENST00000384706 NINQ8N4C6 2090 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 USF3Q68DE3 2245 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 FLGP20930 4061 aaPredicted RBP-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 A0A087WTM6 91 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 GVQW2A0A096LPI5 108 aaPredicted RBP-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 FAM236DA0A1B0GTK5 79 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 TRPC5OSA6NMA1 111 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 HIGD1CA8MV81 97 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 C9JAW5 83 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 GOLGA8KD6RF30 607 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 H0Y980 276 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 TMEM256-PLSCR3K7ERE1 68 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 M0QZ92 97 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 CST8O60676 142 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 NDUFS6O75380 124 aaKnown RBP-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 TNNC2P02585 160 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 APODP05090 189 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 TPM2P07951 284 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 FAM236CP0DP71 79 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 COX5BP10606 129 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 IDO1P14902 403 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 PHBP35232 272 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 DYNLT3P51808 116 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 SPCS3P61009 180 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 KLRD1Q13241 179 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 KRTAP6-2Q3LI66 62 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 Q6Q795 121 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 SMIM11BQ8TCY0 68 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 FGFR1OP2Q9NVK5 253 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 TVP23BQ9NYZ1 205 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 CHMP5Q9NZZ3 219 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 MRPL36Q9P0J6 103 aaKnown RBP-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 NOSIPQ9Y314 301 aaKnown RBP-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 LAMB1P07942 1786 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 CDK12Q9NYV4 1490 aaPredicted RBP-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 CEP164Q9UPV0 1460 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 HIVEP1P15822 2718 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 RAD50Q92878 1312 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 USP9YO00507 2555 aaPredicted RBP-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 KIF1BO60333 1816 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 VIRMAQ69YN4 1812 aaKnown RBP-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 KIAA1549LQ6ZVL6 1849 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 ATRQ13535 2644 aa-0.68□□□□□ -2.52
SNORD28-201ENST00000384706 PCNX1Q96RV3 2341 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 SSC5DA1L4H1 1573 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 BLMP54132 1417 aaPredicted RBP-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 FABP12A6NFH5 140 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 ZNF815PA8K554 130 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 KPNA3O00505 521 aaPredicted RBP-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 TAX1BP3O14907 124 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 LYRM1O43325 122 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 GGCTO75223 188 aaKnown RBP-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 IGF2P01344 180 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 TCRBP04435 133 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 C8GP07360 202 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 IVLP07476 585 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 OCMP0CE72 109 aaPredicted RBP-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 SPRR2EP22531 72 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 SPRR2AP35326 72 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 ATP5G3P48201 142 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 PIGPP57054 158 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 H3F3AP84243 136 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 IMPG1Q17R60 797 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 RRN3P1Q2M238 152 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 KLK9Q2XQG4 91 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 OGFRL1Q5TC84 451 aaPredicted RBP-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 C3orf62Q6ZUJ4 267 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 SSBP3-AS1Q7Z2R9 100 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 UBE2DNLQ8IWF7 75 aa-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 C12orf45Q8N5I9 185 aaPredicted RBP-0.69□□□□□ -2.52
SNORD28-201ENST00000384706 CT55Q8WUE5 264 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms