RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 M0R2Z0 102 aa9.21□□□□□ -0.94
RPAIN-202ENST00000381208 CRXO43186 299 aaPredicted RBP9.21□□□□□ -0.94
RPAIN-202ENST00000381208 HTN3P15516 51 aa9.21□□□□□ -0.94
RPAIN-202ENST00000381208 TAS2R60P59551 318 aa9.21□□□□□ -0.94
RPAIN-202ENST00000381208 HIST1H1AQ02539 215 aaPredicted RBP9.21□□□□□ -0.94
RPAIN-202ENST00000381208 BPIFA4PQ86YQ2 179 aa9.21□□□□□ -0.94
RPAIN-202ENST00000381208 RNF182Q8N6D2 247 aa9.21□□□□□ -0.94
RPAIN-202ENST00000381208 UHRF2Q96PU4 802 aa9.21□□□□□ -0.94
RPAIN-202ENST00000381208 C20orf144Q9BQM9 153 aa9.21□□□□□ -0.94
RPAIN-202ENST00000381208 RCL1Q9Y2P8 373 aaKnown RBP9.21□□□□□ -0.94
RPAIN-202ENST00000381208 C5orf51A6NDU8 294 aa9.2□□□□□ -0.94
RPAIN-202ENST00000381208 FAM229AH3BQW9 127 aa9.2□□□□□ -0.94
RPAIN-202ENST00000381208 CCSO14618 274 aa9.2□□□□□ -0.94
RPAIN-202ENST00000381208 AGPAT2O15120 278 aa9.2□□□□□ -0.94
RPAIN-202ENST00000381208 MBPP02686 304 aaPredicted RBP9.2□□□□□ -0.94
RPAIN-202ENST00000381208 CDKN1BP46527 198 aa9.2□□□□□ -0.94
RPAIN-202ENST00000381208 SLC38A11Q08AI6 406 aa9.2□□□□□ -0.94
RPAIN-202ENST00000381208 IGFL4Q6B9Z1 124 aa9.2□□□□□ -0.94
RPAIN-202ENST00000381208 TMEM88Q6PEY1 159 aa9.2□□□□□ -0.94
RPAIN-202ENST00000381208 ZNF493Q6ZR52 646 aa9.2□□□□□ -0.94
RPAIN-202ENST00000381208 Q6ZRG5 221 aa9.2□□□□□ -0.94
RPAIN-202ENST00000381208 LINC00305Q7Z4B0 112 aa9.2□□□□□ -0.94
RPAIN-202ENST00000381208 C9orf62Q8N4C0 152 aa9.2□□□□□ -0.94
RPAIN-202ENST00000381208 RPUSD4Q96CM3 377 aaKnown RBP9.2□□□□□ -0.94
RPAIN-202ENST00000381208 LINC01587Q99440 93 aa9.2□□□□□ -0.94
RPAIN-202ENST00000381208 HSPB11Q9Y547 144 aa9.2□□□□□ -0.94
RPAIN-202ENST00000381208 PRSS29PA6NIE9 313 aa9.19□□□□□ -0.94
RPAIN-202ENST00000381208 ZNF705GA8MUZ8 300 aaPredicted RBP9.19□□□□□ -0.94
RPAIN-202ENST00000381208 SMLR1H3BR10 107 aa9.19□□□□□ -0.94
RPAIN-202ENST00000381208 MRPS12O15235 138 aaKnown RBP9.19□□□□□ -0.94
RPAIN-202ENST00000381208 COX7A2P2O60397 106 aa9.19□□□□□ -0.94
RPAIN-202ENST00000381208 PVALBP20472 110 aaPredicted RBP9.19□□□□□ -0.94
RPAIN-202ENST00000381208 IFITM2Q01629 132 aa9.19□□□□□ -0.94
RPAIN-202ENST00000381208 PATE2Q6UY27 113 aa9.19□□□□□ -0.94
RPAIN-202ENST00000381208 BAP18Q8IXM2 172 aa9.19□□□□□ -0.94
RPAIN-202ENST00000381208 C16orf74Q96GX8 76 aa9.19□□□□□ -0.94
RPAIN-202ENST00000381208 ZNF331Q9NQX6 463 aaPredicted RBP9.19□□□□□ -0.94
RPAIN-202ENST00000381208 PXMP4Q9Y6I8 212 aa9.19□□□□□ -0.94
RPAIN-202ENST00000381208 HMSDA8MTL9 139 aa9.18□□□□□ -0.94
RPAIN-202ENST00000381208 H7BYZ3 331 aa9.18□□□□□ -0.94
RPAIN-202ENST00000381208 ATP5G1P05496 136 aa9.18□□□□□ -0.94
RPAIN-202ENST00000381208 ATP5G3P48201 142 aa9.18□□□□□ -0.94
RPAIN-202ENST00000381208 C10orf113Q5VZT2 155 aa9.18□□□□□ -0.94
RPAIN-202ENST00000381208 OR1L4Q8NGR5 311 aa9.18□□□□□ -0.94
RPAIN-202ENST00000381208 OR10J6PQ8NGY7 276 aa9.18□□□□□ -0.94
RPAIN-202ENST00000381208 TIMM8BQ9Y5J9 83 aaPredicted RBP9.18□□□□□ -0.94
RPAIN-202ENST00000381208 HERC2O95714 4834 aa9.17□□□□□ -0.94
RPAIN-202ENST00000381208 TRAV12-2A0A075B6T6 113 aa9.17□□□□□ -0.94
RPAIN-202ENST00000381208 A0A1B0GVY2 172 aa9.17□□□□□ -0.94
RPAIN-202ENST00000381208 CBY3A6NI87 242 aa9.17□□□□□ -0.94
RPAIN-202ENST00000381208 M0R2N4 97 aa9.17□□□□□ -0.94
RPAIN-202ENST00000381208 ATP6V1G1O75348 118 aa9.17□□□□□ -0.94
RPAIN-202ENST00000381208 CAMLGP49069 296 aa9.17□□□□□ -0.94
RPAIN-202ENST00000381208 CYCSP99999 105 aaKnown RBP9.17□□□□□ -0.94
RPAIN-202ENST00000381208 ARL16Q0P5N6 197 aa9.17□□□□□ -0.94
RPAIN-202ENST00000381208 GUK1Q16774 197 aa9.17□□□□□ -0.94
RPAIN-202ENST00000381208 Q6ZR54 194 aa9.17□□□□□ -0.94
RPAIN-202ENST00000381208 TMEM263Q8WUH6 116 aaKnown RBP9.17□□□□□ -0.94
RPAIN-202ENST00000381208 PFDN5Q99471 154 aa9.17□□□□□ -0.94
RPAIN-202ENST00000381208 MGST2Q99735 147 aa9.17□□□□□ -0.94
RPAIN-202ENST00000381208 ATG101Q9BSB4 218 aa9.17□□□□□ -0.94
RPAIN-202ENST00000381208 DNAJC4Q9NNZ3 241 aa9.17□□□□□ -0.94
RPAIN-202ENST00000381208 RTL8CO15255 209 aa9.16□□□□□ -0.94
RPAIN-202ENST00000381208 DEFB130BP0DP73 79 aa9.16□□□□□ -0.94
RPAIN-202ENST00000381208 DEFB130AP0DP74 79 aa9.16□□□□□ -0.94
RPAIN-202ENST00000381208 CAV2P51636 162 aa9.16□□□□□ -0.94
RPAIN-202ENST00000381208 HBG1P69891 147 aa9.16□□□□□ -0.94
RPAIN-202ENST00000381208 HBG2P69892 147 aa9.16□□□□□ -0.94
RPAIN-202ENST00000381208 CCDC28AQ8IWP9 274 aa9.16□□□□□ -0.94
RPAIN-202ENST00000381208 C2orf50Q96LR7 162 aa9.16□□□□□ -0.94
RPAIN-202ENST00000381208 UQCC1Q9NVA1 299 aa9.16□□□□□ -0.94
RPAIN-202ENST00000381208 LSM5Q9Y4Y9 91 aaKnown RBP9.16□□□□□ -0.94
RPAIN-202ENST00000381208 IGLV2-18A0A075B6J9 118 aa9.15□□□□□ -0.94
RPAIN-202ENST00000381208 PLAC8L1A1L4L8 177 aa9.15□□□□□ -0.94
RPAIN-202ENST00000381208 F5H768 121 aa9.15□□□□□ -0.94
RPAIN-202ENST00000381208 G3V3Q6 166 aa9.15□□□□□ -0.94
RPAIN-202ENST00000381208 ZNF253O75346 499 aa9.15□□□□□ -0.94
RPAIN-202ENST00000381208 IGLC2P0DOY2 106 aa9.15□□□□□ -0.94
RPAIN-202ENST00000381208 MED14OSP0DP75 135 aa9.15□□□□□ -0.94
RPAIN-202ENST00000381208 S100A11P31949 105 aa9.15□□□□□ -0.94
RPAIN-202ENST00000381208 H2BFSP57053 126 aa9.15□□□□□ -0.94
RPAIN-202ENST00000381208 STX12Q86Y82 276 aa9.15□□□□□ -0.94
RPAIN-202ENST00000381208 OR11H4Q8NGC9 324 aa9.15□□□□□ -0.94
RPAIN-202ENST00000381208 TMEM37Q8WXS4 190 aa9.15□□□□□ -0.94
RPAIN-202ENST00000381208 ODF3Q96PU9 254 aa9.15□□□□□ -0.94
RPAIN-202ENST00000381208 DNAH17Q9UFH2 4485 aa9.14□□□□□ -0.95
RPAIN-202ENST00000381208 AZU1P20160 251 aa9.14□□□□□ -0.95
RPAIN-202ENST00000381208 RPL29P47914 159 aaKnown RBP9.14□□□□□ -0.95
RPAIN-202ENST00000381208 SULT1A1P50225 295 aa9.14□□□□□ -0.95
RPAIN-202ENST00000381208 CCL18P55774 89 aa9.14□□□□□ -0.95
RPAIN-202ENST00000381208 S100A10P60903 97 aa9.14□□□□□ -0.95
RPAIN-202ENST00000381208 OPCMLQ14982 345 aa9.14□□□□□ -0.95
RPAIN-202ENST00000381208 ATP6V1FQ16864 119 aa9.14□□□□□ -0.95
RPAIN-202ENST00000381208 VWC2Q2TAL6 325 aa9.14□□□□□ -0.95
RPAIN-202ENST00000381208 LGALSLQ3ZCW2 172 aaPredicted RBP9.14□□□□□ -0.95
RPAIN-202ENST00000381208 C1orf134Q5TEV5 83 aa9.14□□□□□ -0.95
RPAIN-202ENST00000381208 LYRM2Q9NU23 88 aaPredicted RBP9.14□□□□□ -0.95
RPAIN-202ENST00000381208 WDR83OSQ9Y284 106 aa9.14□□□□□ -0.95
RPAIN-202ENST00000381208 FAT2Q9NYQ8 4349 aa9.14□□□□□ -0.95
RPAIN-202ENST00000381208 DNAH2Q9P225 4427 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms