RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ZNF256Q9Y2P7 627 aaPredicted RBP6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 TNFRSF18Q9Y5U5 241 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 PAX9P55771 341 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 OR8A1Q8NGG7 326 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 SMDT1Q9H4I9 107 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 E7EUB6 86 aa6.65□□□□□ -1.34
CRNKL1-202ENST00000377340 H3BVH4 76 aa6.65□□□□□ -1.34
CRNKL1-202ENST00000377340 CMC4P56277 68 aaPredicted RBP6.65□□□□□ -1.34
CRNKL1-202ENST00000377340 Q6ZN92 141 aa6.65□□□□□ -1.34
CRNKL1-202ENST00000377340 PUSL1Q8N0Z8 303 aaKnown RBP6.65□□□□□ -1.34
CRNKL1-202ENST00000377340 SFRP2Q96HF1 295 aa6.65□□□□□ -1.34
CRNKL1-202ENST00000377340 TRAV12-2A0A075B6T6 113 aa6.65□□□□□ -1.34
CRNKL1-202ENST00000377340 NDUFA4O00483 81 aa6.65□□□□□ -1.34
CRNKL1-202ENST00000377340 IGLC1P0CG04 106 aa6.65□□□□□ -1.34
CRNKL1-202ENST00000377340 GZMBP10144 247 aa6.65□□□□□ -1.34
CRNKL1-202ENST00000377340 TMEM18Q96B42 140 aa6.65□□□□□ -1.34
CRNKL1-202ENST00000377340 PROP1O75360 226 aa6.65□□□□□ -1.35
CRNKL1-202ENST00000377340 LGALS1P09382 135 aaKnown RBP6.65□□□□□ -1.35
CRNKL1-202ENST00000377340 YPEL3P61236 119 aaPredicted RBP6.65□□□□□ -1.35
CRNKL1-202ENST00000377340 CFHR3Q02985 330 aa6.65□□□□□ -1.35
CRNKL1-202ENST00000377340 ZNF415Q09FC8 603 aa6.65□□□□□ -1.35
CRNKL1-202ENST00000377340 FER1L6-AS1Q8NA97 138 aa6.65□□□□□ -1.35
CRNKL1-202ENST00000377340 LY6G5BQ8NDX9 201 aa6.65□□□□□ -1.35
CRNKL1-202ENST00000377340 PSMG3-AS1Q96PY0 264 aa6.65□□□□□ -1.35
CRNKL1-202ENST00000377340 SHANK2-AS3Q9BTD1 123 aa6.65□□□□□ -1.35
CRNKL1-202ENST00000377340 LEPP41159 167 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 ZNF138P52744 262 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 SSBP2P81877 361 aaPredicted RBP6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 POU2AF1Q16633 256 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 TTC9CQ8N5M4 171 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 KCNS1Q96KK3 526 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 IGHV4OR15-8A0A075B7B6 117 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 A0A087WW49 117 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 F6UB75 175 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 M0R2Z0 102 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 PSG3Q16557 428 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 ZNF506Q5JVG8 444 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 C1QL4Q86Z23 238 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 ODF3L1Q8IXM7 274 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 OR4C5Q8NGB2 326 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 FMC1Q96HJ9 113 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 MCRIP2Q9BUT9 160 aaKnown RBP6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 PARD6GQ9BYG4 376 aaPredicted RBP6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 MRPL27Q9P0M9 148 aaKnown RBP6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 CD28P10747 220 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 REC114Q7Z4M0 266 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 SVIPQ8NHG7 77 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 DERL1Q9BUN8 251 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 C1QTNF4Q9BXJ3 329 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 FREM2Q5SZK8 3169 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 SRP19P09132 144 aaKnown RBP6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 FOXE3Q13461 319 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 C10orf99Q6UWK7 81 aa6.64□□□□□ -1.35
CRNKL1-202ENST00000377340 IGHG2P01859 326 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 TCRAP04437 139 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 SMIM6P0DI80 62 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 CGB3P0DN86 165 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 CGB7P0DN87 165 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 PMS2P11Q13670 270 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 APRG1Q8IVJ8 170 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 OCC1Q8TAD7 63 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 C5orf30Q96GV9 206 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 ADAMTS20P59510 1910 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 A0A1B0GUT8 65 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 A6NDX4 124 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 A8MXK9 166 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 UBE2DNLQ8IWF7 75 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 NPBQ8NG41 125 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 C1orf159Q96HA4 380 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 RCHY1Q96PM5 261 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 HIGD1CA8MV81 97 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 CBLN1P23435 193 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 MYOZ3Q8TDC0 251 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 ST6GALNAC6Q969X2 333 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 KIR2DL4Q99706 377 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 CYTL1Q9NRR1 136 aa6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 GCN1Q92616 2671 aaKnown RBP6.63□□□□□ -1.35
CRNKL1-202ENST00000377340 IGHV7-4-1A0A0J9YVY3 117 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 NUDT3O95989 172 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 TAS2R60P59551 318 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 CRIP3Q6Q6R5 217 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 ZNF491Q8N8L2 437 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 KLK9Q9UKQ9 250 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 GP9P14770 177 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 VAMP3Q15836 100 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 Q6YL49 198 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 Q6ZPA2 131 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 SMPXQ9UHP9 88 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 CXorf65A6NEN9 183 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 INSP01308 110 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 TRBV12-3P01733 135 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 HLA-DMBP28068 263 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 SRSF3P84103 164 aaKnown RBP6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 COX19Q49B96 90 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 RPP21Q9H633 154 aaKnown RBP6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 ZFP30Q9Y2G7 519 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 K7EIM0 57 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 TMEM136Q6ZRR5 245 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 Q6ZSV7 163 aa6.62□□□□□ -1.35
CRNKL1-202ENST00000377340 TGIF2-C20orf24A0A0A6YYL0 155 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms