RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 A0A1W2PPV4 95 aa8.83□□□□□ -1
LSM2-208ENST00000375661 KNCNA6PVL3 124 aa8.83□□□□□ -1
LSM2-208ENST00000375661 SLC17A3O00476 420 aa8.83□□□□□ -1
LSM2-208ENST00000375661 SEC11BP0C7V7 166 aa8.83□□□□□ -1
LSM2-208ENST00000375661 HLA-DMBP28068 263 aa8.83□□□□□ -1
LSM2-208ENST00000375661 ID1P41134 155 aa8.83□□□□□ -1
LSM2-208ENST00000375661 SNRPD3P62318 126 aaKnown RBP8.83□□□□□ -1
LSM2-208ENST00000375661 LCN15Q6UWW0 184 aa8.83□□□□□ -1
LSM2-208ENST00000375661 SSX7Q7RTT5 188 aa8.83□□□□□ -1
LSM2-208ENST00000375661 RNF141Q8WVD5 230 aa8.83□□□□□ -1
LSM2-208ENST00000375661 FXYD5Q96DB9 178 aa8.83□□□□□ -1
LSM2-208ENST00000375661 LINC00052Q96N35 136 aa8.83□□□□□ -1
LSM2-208ENST00000375661 PAXXQ9BUH6 204 aa8.83□□□□□ -1
LSM2-208ENST00000375661 ZNF331Q9NQX6 463 aaPredicted RBP8.83□□□□□ -1
LSM2-208ENST00000375661 TRBV19A0A075B6N1 114 aa8.82□□□□□ -1
LSM2-208ENST00000375661 HMGB3O15347 200 aaKnown RBP8.82□□□□□ -1
LSM2-208ENST00000375661 NDUFB4O95168 129 aa8.82□□□□□ -1
LSM2-208ENST00000375661 STAG3L2P0CL84 134 aa8.82□□□□□ -1
LSM2-208ENST00000375661 STAG3L3P0CL85 134 aa8.82□□□□□ -1
LSM2-208ENST00000375661 MED14OSP0DP75 135 aa8.82□□□□□ -1
LSM2-208ENST00000375661 TPT1P13693 172 aaKnown RBP8.82□□□□□ -1
LSM2-208ENST00000375661 CDC34P49427 236 aaPredicted RBP8.82□□□□□ -1
LSM2-208ENST00000375661 TAS2R45P59539 299 aa8.82□□□□□ -1
LSM2-208ENST00000375661 EIF5AP63241 154 aaKnown RBP8.82□□□□□ -1
LSM2-208ENST00000375661 ZNF726P1Q15940 193 aa8.82□□□□□ -1
LSM2-208ENST00000375661 GUK1Q16774 197 aa8.82□□□□□ -1
LSM2-208ENST00000375661 AKR1C8PQ5T2L2 129 aa8.82□□□□□ -1
LSM2-208ENST00000375661 SLC51BQ86UW2 128 aa8.82□□□□□ -1
LSM2-208ENST00000375661 RNF182Q8N6D2 247 aa8.82□□□□□ -1
LSM2-208ENST00000375661 RAB24Q969Q5 203 aa8.82□□□□□ -1
LSM2-208ENST00000375661 ACTR3CQ9C0K3 210 aaPredicted RBP8.82□□□□□ -1
LSM2-208ENST00000375661 IGLL5B9A064 214 aa8.81□□□□□ -1
LSM2-208ENST00000375661 OR7C2O60412 319 aa8.81□□□□□ -1
LSM2-208ENST00000375661 ZNF253O75346 499 aa8.81□□□□□ -1
LSM2-208ENST00000375661 OR10J4P0C629 311 aa8.81□□□□□ -1
LSM2-208ENST00000375661 NBEAP1P0C6P0 100 aa8.81□□□□□ -1
LSM2-208ENST00000375661 KHDC3LQ587J8 217 aa8.81□□□□□ -1
LSM2-208ENST00000375661 GDF5OSQ5U4N7 250 aa8.81□□□□□ -1
LSM2-208ENST00000375661 LRRC20Q8TCA0 184 aa8.81□□□□□ -1
LSM2-208ENST00000375661 BLNKQ8WV28 456 aa8.81□□□□□ -1
LSM2-208ENST00000375661 TMED6Q8WW62 240 aa8.81□□□□□ -1
LSM2-208ENST00000375661 SLC50A1Q9BRV3 221 aa8.81□□□□□ -1
LSM2-208ENST00000375661 BOLA1Q9Y3E2 137 aa8.81□□□□□ -1
LSM2-208ENST00000375661 MUC4Q99102 2169 aa8.8□□□□□ -1
LSM2-208ENST00000375661 CTXND1A0A1B0GTU2 59 aa8.8□□□□□ -1
LSM2-208ENST00000375661 F6UB75 175 aa8.8□□□□□ -1
LSM2-208ENST00000375661 CA1P00915 261 aaPredicted RBP8.8□□□□□ -1
LSM2-208ENST00000375661 PRB4P10163 310 aaPredicted RBP8.8□□□□□ -1
LSM2-208ENST00000375661 FHITP49789 147 aa8.8□□□□□ -1
LSM2-208ENST00000375661 PDE6HQ13956 83 aa8.8□□□□□ -1
LSM2-208ENST00000375661 PSG3Q16557 428 aa8.8□□□□□ -1
LSM2-208ENST00000375661 ACTL10Q5JWF8 245 aa8.8□□□□□ -1
LSM2-208ENST00000375661 PQLC2Q6ZP29 291 aa8.8□□□□□ -1
LSM2-208ENST00000375661 SAV1Q9H4B6 383 aaPredicted RBP8.8□□□□□ -1
LSM2-208ENST00000375661 KIAA1109Q2LD37 5005 aa8.8□□□□□ -1
LSM2-208ENST00000375661 A0A1B0GVY2 172 aa8.79□□□□□ -1
LSM2-208ENST00000375661 ZNF705FA8MVS1 300 aaPredicted RBP8.79□□□□□ -1
LSM2-208ENST00000375661 PRAC2D3DTV9 90 aa8.79□□□□□ -1
LSM2-208ENST00000375661 H3BMM0 161 aa8.79□□□□□ -1
LSM2-208ENST00000375661 ARL14EPLP0DKL9 152 aa8.79□□□□□ -1
LSM2-208ENST00000375661 UBE2L3P68036 154 aaKnown RBP8.79□□□□□ -1
LSM2-208ENST00000375661 FOXI2Q6ZQN5 318 aa8.79□□□□□ -1
LSM2-208ENST00000375661 TRPT1Q86TN4 253 aaKnown RBP8.79□□□□□ -1
LSM2-208ENST00000375661 EXOC3-AS1Q8N2X6 119 aa8.79□□□□□ -1
LSM2-208ENST00000375661 SUN5Q8TC36 379 aa8.79□□□□□ -1
LSM2-208ENST00000375661 PHYHIPLQ96FC7 376 aa8.79□□□□□ -1
LSM2-208ENST00000375661 A0A0J9YX75 114 aa8.78□□□□□ -1
LSM2-208ENST00000375661 UMAD1C9J7I0 102 aa8.78□□□□□ -1
LSM2-208ENST00000375661 M0R3E3 92 aa8.78□□□□□ -1
LSM2-208ENST00000375661 HLA-DRB4P13762 266 aa8.78□□□□□ -1
LSM2-208ENST00000375661 C4BPBP20851 252 aa8.78□□□□□ -1
LSM2-208ENST00000375661 GCHFRP30047 84 aa8.78□□□□□ -1
LSM2-208ENST00000375661 PSG9Q00887 426 aa8.78□□□□□ -1
LSM2-208ENST00000375661 STHQ8IWL8 128 aa8.78□□□□□ -1
LSM2-208ENST00000375661 Q8NAQ8 132 aa8.78□□□□□ -1
LSM2-208ENST00000375661 RPUSD4Q96CM3 377 aaKnown RBP8.78□□□□□ -1
LSM2-208ENST00000375661 CLEC5AQ9NY25 188 aa8.78□□□□□ -1
LSM2-208ENST00000375661 HLA-DRB4X5D2U9 266 aa8.78□□□□□ -1
LSM2-208ENST00000375661 TRAV10A0A0B4J240 114 aa8.77□□□□□ -1.01
LSM2-208ENST00000375661 BOLA2-SMG1P6H3BVE0 249 aa8.77□□□□□ -1.01
LSM2-208ENST00000375661 DEFB4AO15263 64 aa8.77□□□□□ -1.01
LSM2-208ENST00000375661 CXorf1O96002 111 aa8.77□□□□□ -1.01
LSM2-208ENST00000375661 ZNF705DP0CH99 300 aaPredicted RBP8.77□□□□□ -1.01
LSM2-208ENST00000375661 ZNF705BP0CI00 300 aaPredicted RBP8.77□□□□□ -1.01
LSM2-208ENST00000375661 MIFP14174 115 aa8.77□□□□□ -1.01
LSM2-208ENST00000375661 FGF8P55075 233 aaPredicted RBP8.77□□□□□ -1.01
LSM2-208ENST00000375661 RANP62826 216 aaKnown RBP8.77□□□□□ -1.01
LSM2-208ENST00000375661 ICAM4Q14773 271 aa8.77□□□□□ -1.01
LSM2-208ENST00000375661 EBLN2Q6P2I7 272 aa8.77□□□□□ -1.01
LSM2-208ENST00000375661 ZNF738Q8NE65 137 aa8.77□□□□□ -1.01
LSM2-208ENST00000375661 MBD3L1Q8WWY6 194 aa8.77□□□□□ -1.01
LSM2-208ENST00000375661 MRPL53Q96EL3 112 aaKnown RBP8.77□□□□□ -1.01
LSM2-208ENST00000375661 TMPRSS5Q9H3S3 457 aa8.77□□□□□ -1.01
LSM2-208ENST00000375661 VPS13DQ5THJ4 4388 aa8.77□□□□□ -1.01
LSM2-208ENST00000375661 AGRNO00468 2067 aa8.76□□□□□ -1.01
LSM2-208ENST00000375661 IGHV4-4A0A075B6R2 117 aa8.76□□□□□ -1.01
LSM2-208ENST00000375661 MAP1LC3B2A6NCE7 125 aa8.76□□□□□ -1.01
LSM2-208ENST00000375661 A8MTW9 85 aa8.76□□□□□ -1.01
LSM2-208ENST00000375661 GIG44P09565 113 aaPredicted RBP8.76□□□□□ -1.01
LSM2-208ENST00000375661 SULT1A2P50226 295 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms