RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 OR4C46A6NHA9 309 aa13.12□□□□□ -0.31
PFDN6-201ENST00000374606 K7EQG2 157 aa13.12□□□□□ -0.31
PFDN6-201ENST00000374606 IGLL1P15814 213 aa13.12□□□□□ -0.31
PFDN6-201ENST00000374606 ID1P41134 155 aa13.12□□□□□ -0.31
PFDN6-201ENST00000374606 SUMO1P63165 101 aaKnown RBP13.12□□□□□ -0.31
PFDN6-201ENST00000374606 RARRES2Q99969 163 aa13.12□□□□□ -0.31
PFDN6-201ENST00000374606 CLEC5AQ9NY25 188 aa13.12□□□□□ -0.31
PFDN6-201ENST00000374606 IZUMO1RA6ND01 250 aa13.11□□□□□ -0.31
PFDN6-201ENST00000374606 SLC25A5P05141 298 aaKnown RBP13.11□□□□□ -0.31
PFDN6-201ENST00000374606 PEA15Q15121 130 aa13.11□□□□□ -0.31
PFDN6-201ENST00000374606 IGFL4Q6B9Z1 124 aa13.11□□□□□ -0.31
PFDN6-201ENST00000374606 RNF182Q8N6D2 247 aa13.11□□□□□ -0.31
PFDN6-201ENST00000374606 C5orf17Q8NAS9 161 aa13.11□□□□□ -0.31
PFDN6-201ENST00000374606 CMTM2Q8TAZ6 248 aa13.11□□□□□ -0.31
PFDN6-201ENST00000374606 PRELID1Q9Y255 219 aa13.11□□□□□ -0.31
PFDN6-201ENST00000374606 HLA-DMBP28068 263 aa13.1□□□□□ -0.31
PFDN6-201ENST00000374606 SNRPD3P62318 126 aaKnown RBP13.1□□□□□ -0.31
PFDN6-201ENST00000374606 MRPL53Q96EL3 112 aaKnown RBP13.1□□□□□ -0.31
PFDN6-201ENST00000374606 TCEAL7Q9BRU2 100 aa13.1□□□□□ -0.31
PFDN6-201ENST00000374606 RPH3ALQ9UNE2 315 aa13.1□□□□□ -0.31
PFDN6-201ENST00000374606 F6UZH7 168 aa13.09□□□□□ -0.31
PFDN6-201ENST00000374606 M0R3E3 92 aa13.09□□□□□ -0.31
PFDN6-201ENST00000374606 PDE6DO43924 150 aa13.09□□□□□ -0.31
PFDN6-201ENST00000374606 ZNF688P0C7X2 276 aa13.09□□□□□ -0.31
PFDN6-201ENST00000374606 CSN1S1P47710 185 aa13.09□□□□□ -0.31
PFDN6-201ENST00000374606 CD81P60033 236 aa13.09□□□□□ -0.31
PFDN6-201ENST00000374606 COL7A1Q02388 2944 aa13.09□□□□□ -0.31
PFDN6-201ENST00000374606 PSG3Q16557 428 aa13.09□□□□□ -0.31
PFDN6-201ENST00000374606 NDUFA5Q16718 116 aa13.09□□□□□ -0.31
PFDN6-201ENST00000374606 CCDC28AQ8IWP9 274 aa13.09□□□□□ -0.31
PFDN6-201ENST00000374606 FAM24BQ8N5W8 94 aa13.09□□□□□ -0.31
PFDN6-201ENST00000374606 ZNF738Q8NE65 137 aa13.09□□□□□ -0.31
PFDN6-201ENST00000374606 LINC00052Q96N35 136 aa13.09□□□□□ -0.31
PFDN6-201ENST00000374606 TREM1Q9NP99 234 aa13.09□□□□□ -0.31
PFDN6-201ENST00000374606 K7EIL1 84 aa13.08□□□□□ -0.32
PFDN6-201ENST00000374606 GNG5P63218 68 aa13.08□□□□□ -0.32
PFDN6-201ENST00000374606 SRSF3P84103 164 aaKnown RBP13.08□□□□□ -0.32
PFDN6-201ENST00000374606 C20orf173Q96LM9 149 aa13.08□□□□□ -0.32
PFDN6-201ENST00000374606 WWC2-AS2Q96NR7 200 aa13.08□□□□□ -0.32
PFDN6-201ENST00000374606 SMDT1Q9H4I9 107 aa13.08□□□□□ -0.32
PFDN6-201ENST00000374606 DNAH9Q9NYC9 4486 aa13.07□□□□□ -0.32
PFDN6-201ENST00000374606 SCO2A0A1W2PP80 73 aa13.07□□□□□ -0.32
PFDN6-201ENST00000374606 PEX7O00628 323 aa13.07□□□□□ -0.32
PFDN6-201ENST00000374606 PSMG4Q5JS54 123 aa13.07□□□□□ -0.32
PFDN6-201ENST00000374606 UQCC3Q6UW78 93 aa13.07□□□□□ -0.32
PFDN6-201ENST00000374606 HIST1H2BAQ96A08 127 aa13.07□□□□□ -0.32
PFDN6-201ENST00000374606 ATG101Q9BSB4 218 aa13.07□□□□□ -0.32
PFDN6-201ENST00000374606 EPDR1Q9UM22 224 aa13.07□□□□□ -0.32
PFDN6-201ENST00000374606 ZNF256Q9Y2P7 627 aaPredicted RBP13.07□□□□□ -0.32
PFDN6-201ENST00000374606 TMEM250H0YL14 139 aa13.06□□□□□ -0.32
PFDN6-201ENST00000374606 NDUFS6O75380 124 aaKnown RBP13.06□□□□□ -0.32
PFDN6-201ENST00000374606 TCRAP04437 139 aa13.06□□□□□ -0.32
PFDN6-201ENST00000374606 EIF4E3Q8N5X7 224 aaKnown RBP13.06□□□□□ -0.32
PFDN6-201ENST00000374606 ARL6IP6Q8N6S5 226 aa13.06□□□□□ -0.32
PFDN6-201ENST00000374606 C11orf52Q96A22 123 aa13.06□□□□□ -0.32
PFDN6-201ENST00000374606 RPUSD4Q96CM3 377 aaKnown RBP13.06□□□□□ -0.32
PFDN6-201ENST00000374606 ZNF705FA8MVS1 300 aaPredicted RBP13.05□□□□□ -0.32
PFDN6-201ENST00000374606 K7EQM0 130 aa13.05□□□□□ -0.32
PFDN6-201ENST00000374606 SRP19P09132 144 aaKnown RBP13.05□□□□□ -0.32
PFDN6-201ENST00000374606 AKR1C3P42330 323 aa13.05□□□□□ -0.32
PFDN6-201ENST00000374606 CEBPGP53567 150 aa13.05□□□□□ -0.32
PFDN6-201ENST00000374606 CYB561D1Q8N8Q1 229 aa13.05□□□□□ -0.32
PFDN6-201ENST00000374606 MAP6D1Q9H9H5 199 aa13.05□□□□□ -0.32
PFDN6-201ENST00000374606 SERTM2A0A1B0GWG4 89 aa13.04□□□□□ -0.32
PFDN6-201ENST00000374606 DIRC3C9JPN6 131 aa13.04□□□□□ -0.32
PFDN6-201ENST00000374606 DEFB131AP59861 70 aa13.04□□□□□ -0.32
PFDN6-201ENST00000374606 DEFB121Q5J5C9 76 aa13.04□□□□□ -0.32
PFDN6-201ENST00000374606 GOLT1AQ6ZVE7 132 aa13.04□□□□□ -0.32
PFDN6-201ENST00000374606 IGKV2-40A0A087WW87 121 aaPredicted RBP13.03□□□□□ -0.32
PFDN6-201ENST00000374606 C9JQL5 133 aa13.03□□□□□ -0.32
PFDN6-201ENST00000374606 PRAC2D3DTV9 90 aa13.03□□□□□ -0.32
PFDN6-201ENST00000374606 IGKV2D-40P01614 121 aaPredicted RBP13.03□□□□□ -0.32
PFDN6-201ENST00000374606 PRB4P10163 310 aaPredicted RBP13.03□□□□□ -0.32
PFDN6-201ENST00000374606 CNN1P51911 297 aaKnown RBP13.03□□□□□ -0.32
PFDN6-201ENST00000374606 CMC4P56277 68 aaPredicted RBP13.03□□□□□ -0.32
PFDN6-201ENST00000374606 ODF3L2Q3SX64 289 aa13.03□□□□□ -0.32
PFDN6-201ENST00000374606 SLC7A5P1Q8MH63 180 aa13.03□□□□□ -0.32
PFDN6-201ENST00000374606 SLC35B3Q9H1N7 401 aa13.03□□□□□ -0.32
PFDN6-201ENST00000374606 OR11H12B2RN74 326 aa13.02□□□□□ -0.33
PFDN6-201ENST00000374606 GTSCR1Q86UQ5 136 aa13.02□□□□□ -0.33
PFDN6-201ENST00000374606 OR10J6PQ8NGY7 276 aa13.02□□□□□ -0.33
PFDN6-201ENST00000374606 C2CD4CQ8TF44 421 aa13.02□□□□□ -0.33
PFDN6-201ENST00000374606 CITED4Q96RK1 184 aa13.02□□□□□ -0.33
PFDN6-201ENST00000374606 RBAKDNA6NC62 111 aa13.01□□□□□ -0.33
PFDN6-201ENST00000374606 SFTA3P0C7M3 94 aa13.01□□□□□ -0.33
PFDN6-201ENST00000374606 DEFB1P60022 68 aa13.01□□□□□ -0.33
PFDN6-201ENST00000374606 UBE2G1P62253 170 aa13.01□□□□□ -0.33
PFDN6-201ENST00000374606 EBLN2Q6P2I7 272 aa13.01□□□□□ -0.33
PFDN6-201ENST00000374606 FOXI2Q6ZQN5 318 aa13.01□□□□□ -0.33
PFDN6-201ENST00000374606 FAM110AQ9BQ89 295 aa13.01□□□□□ -0.33
PFDN6-201ENST00000374606 DERL1Q9BUN8 251 aa13.01□□□□□ -0.33
PFDN6-201ENST00000374606 F6UB75 175 aa13□□□□□ -0.33
PFDN6-201ENST00000374606 CD7P09564 240 aa13□□□□□ -0.33
PFDN6-201ENST00000374606 HIST1H1AQ02539 215 aaPredicted RBP13□□□□□ -0.33
PFDN6-201ENST00000374606 ZNF674Q2M3X9 581 aa13□□□□□ -0.33
PFDN6-201ENST00000374606 TMEM75Q8N9X5 138 aa13□□□□□ -0.33
PFDN6-201ENST00000374606 OR8A1Q8NGG7 326 aa13□□□□□ -0.33
PFDN6-201ENST00000374606 FMC1Q96HJ9 113 aa13□□□□□ -0.33
PFDN6-201ENST00000374606 PARLQ9H300 379 aa13□□□□□ -0.33
PFDN6-201ENST00000374606 ZMAT5Q9UDW3 170 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms