RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 TMEM37Q8WXS4 190 aa11.91□□□□□ -0.5
PFDN4-201ENST00000371419 UHRF2Q96PU4 802 aa11.91□□□□□ -0.5
PFDN4-201ENST00000371419 SLC25A39Q9BZJ4 359 aaPredicted RBP11.91□□□□□ -0.5
PFDN4-201ENST00000371419 MS4A6AQ9H2W1 248 aa11.91□□□□□ -0.5
PFDN4-201ENST00000371419 PRKDCP78527 4128 aaKnown RBP11.91□□□□□ -0.5
PFDN4-201ENST00000371419 TRAV2A0A0B4J234 112 aa11.9□□□□□ -0.5
PFDN4-201ENST00000371419 ZNF98A6NK75 572 aa11.9□□□□□ -0.5
PFDN4-201ENST00000371419 UBE2G2P60604 165 aa11.9□□□□□ -0.5
PFDN4-201ENST00000371419 OR8I2Q8N0Y5 310 aa11.9□□□□□ -0.5
PFDN4-201ENST00000371419 STXBP6Q8NFX7 210 aa11.9□□□□□ -0.5
PFDN4-201ENST00000371419 PARLQ9H300 379 aa11.9□□□□□ -0.5
PFDN4-201ENST00000371419 CXorf65A6NEN9 183 aa11.89□□□□□ -0.51
PFDN4-201ENST00000371419 H3BRN7 92 aa11.89□□□□□ -0.51
PFDN4-201ENST00000371419 AKR1C3P42330 323 aa11.89□□□□□ -0.51
PFDN4-201ENST00000371419 ZNF674Q2M3X9 581 aa11.89□□□□□ -0.51
PFDN4-201ENST00000371419 PATE2Q6UY27 113 aa11.89□□□□□ -0.51
PFDN4-201ENST00000371419 WFDC3Q8IUB2 231 aa11.89□□□□□ -0.51
PFDN4-201ENST00000371419 RPUSD4Q96CM3 377 aaKnown RBP11.89□□□□□ -0.51
PFDN4-201ENST00000371419 SHANK2-AS3Q9BTD1 123 aa11.89□□□□□ -0.51
PFDN4-201ENST00000371419 OR11H12B2RN74 326 aa11.89□□□□□ -0.51
PFDN4-201ENST00000371419 OR7C2O60412 319 aa11.89□□□□□ -0.51
PFDN4-201ENST00000371419 ATP5G3P48201 142 aa11.89□□□□□ -0.51
PFDN4-201ENST00000371419 CTDSP1Q9GZU7 261 aa11.89□□□□□ -0.51
PFDN4-201ENST00000371419 TMEM242Q9NWH2 141 aa11.89□□□□□ -0.51
PFDN4-201ENST00000371419 RNF24Q9Y225 148 aa11.89□□□□□ -0.51
PFDN4-201ENST00000371419 COLCA2A8K830 154 aa11.88□□□□□ -0.51
PFDN4-201ENST00000371419 MT-ND4LP03901 98 aa11.88□□□□□ -0.51
PFDN4-201ENST00000371419 IGHV4-30-4P0DP06 118 aa11.88□□□□□ -0.51
PFDN4-201ENST00000371419 ATF4P18848 351 aaPredicted RBP11.88□□□□□ -0.51
PFDN4-201ENST00000371419 CMC4P56277 68 aaPredicted RBP11.88□□□□□ -0.51
PFDN4-201ENST00000371419 GPR82Q96P67 336 aa11.88□□□□□ -0.51
PFDN4-201ENST00000371419 NRN1Q9NPD7 142 aa11.88□□□□□ -0.51
PFDN4-201ENST00000371419 C19orf73Q9NVV2 129 aa11.88□□□□□ -0.51
PFDN4-201ENST00000371419 YTHDF2Q9Y5A9 579 aaKnown RBP11.88□□□□□ -0.51
PFDN4-201ENST00000371419 A0A1W2PRE2 83 aa11.87□□□□□ -0.51
PFDN4-201ENST00000371419 K7EQG2 157 aa11.87□□□□□ -0.51
PFDN4-201ENST00000371419 GALR1P47211 349 aa11.87□□□□□ -0.51
PFDN4-201ENST00000371419 ODF3L2Q3SX64 289 aa11.87□□□□□ -0.51
PFDN4-201ENST00000371419 LEMD1Q68G75 181 aa11.87□□□□□ -0.51
PFDN4-201ENST00000371419 LINC00305Q7Z4B0 112 aa11.87□□□□□ -0.51
PFDN4-201ENST00000371419 DEFB125Q8N687 156 aa11.87□□□□□ -0.51
PFDN4-201ENST00000371419 DCANP1Q8TF63 244 aa11.87□□□□□ -0.51
PFDN4-201ENST00000371419 C11orf52Q96A22 123 aa11.87□□□□□ -0.51
PFDN4-201ENST00000371419 FAM167A-AS1Q96KT0 104 aa11.87□□□□□ -0.51
PFDN4-201ENST00000371419 FAM110AQ9BQ89 295 aa11.87□□□□□ -0.51
PFDN4-201ENST00000371419 SLC25A2Q9BXI2 301 aa11.87□□□□□ -0.51
PFDN4-201ENST00000371419 WFDC10AQ9H1F0 79 aa11.87□□□□□ -0.51
PFDN4-201ENST00000371419 A8MZ25 164 aa11.86□□□□□ -0.51
PFDN4-201ENST00000371419 RPL7P18124 248 aaKnown RBP11.86□□□□□ -0.51
PFDN4-201ENST00000371419 RNF212Q495C1 297 aa11.86□□□□□ -0.51
PFDN4-201ENST00000371419 ZNF503Q96F45 646 aa11.86□□□□□ -0.51
PFDN4-201ENST00000371419 PAXXQ9BUH6 204 aa11.86□□□□□ -0.51
PFDN4-201ENST00000371419 OR51M1Q9H341 326 aa11.86□□□□□ -0.51
PFDN4-201ENST00000371419 NDUFB4O95168 129 aa11.85□□□□□ -0.51
PFDN4-201ENST00000371419 RPL23P62829 140 aaKnown RBP11.85□□□□□ -0.51
PFDN4-201ENST00000371419 UBE2L3P68036 154 aaKnown RBP11.85□□□□□ -0.51
PFDN4-201ENST00000371419 ADIRFQ15847 76 aa11.85□□□□□ -0.51
PFDN4-201ENST00000371419 MAP6D1Q9H9H5 199 aa11.85□□□□□ -0.51
PFDN4-201ENST00000371419 FRMD6-AS1P0C7T7 363 aa11.84□□□□□ -0.51
PFDN4-201ENST00000371419 FAM24BQ8N5W8 94 aa11.84□□□□□ -0.51
PFDN4-201ENST00000371419 HIST1H2BAQ96A08 127 aa11.84□□□□□ -0.51
PFDN4-201ENST00000371419 ANAPC16Q96DE5 110 aa11.84□□□□□ -0.51
PFDN4-201ENST00000371419 SRD5A3Q9H8P0 318 aa11.84□□□□□ -0.51
PFDN4-201ENST00000371419 TRAV5A0A0B4J249 113 aa11.83□□□□□ -0.52
PFDN4-201ENST00000371419 OR10J4P0C629 311 aa11.83□□□□□ -0.52
PFDN4-201ENST00000371419 MEOX2P50222 304 aa11.83□□□□□ -0.52
PFDN4-201ENST00000371419 SAMD13Q5VXD3 122 aa11.83□□□□□ -0.52
PFDN4-201ENST00000371419 B9D2Q9BPU9 175 aa11.83□□□□□ -0.52
PFDN4-201ENST00000371419 TCEAL7Q9BRU2 100 aa11.83□□□□□ -0.52
PFDN4-201ENST00000371419 SCO2A0A1W2PP80 73 aa11.83□□□□□ -0.52
PFDN4-201ENST00000371419 ZNF688P0C7X2 276 aa11.83□□□□□ -0.52
PFDN4-201ENST00000371419 DEFB131AP59861 70 aa11.83□□□□□ -0.52
PFDN4-201ENST00000371419 SNRPD3P62318 126 aaKnown RBP11.83□□□□□ -0.52
PFDN4-201ENST00000371419 MORN5Q5VZ52 161 aa11.83□□□□□ -0.52
PFDN4-201ENST00000371419 DMRTA1Q5VZB9 504 aa11.83□□□□□ -0.52
PFDN4-201ENST00000371419 BPIFA4PQ86YQ2 179 aa11.83□□□□□ -0.52
PFDN4-201ENST00000371419 ISOC2Q96AB3 205 aa11.83□□□□□ -0.52
PFDN4-201ENST00000371419 LY96Q9Y6Y9 160 aa11.83□□□□□ -0.52
PFDN4-201ENST00000371419 C9JCJ5 164 aa11.82□□□□□ -0.52
PFDN4-201ENST00000371419 ID1P41134 155 aa11.82□□□□□ -0.52
PFDN4-201ENST00000371419 FLI1Q01543 452 aaPredicted RBP11.82□□□□□ -0.52
PFDN4-201ENST00000371419 APRG1Q8IVJ8 170 aa11.82□□□□□ -0.52
PFDN4-201ENST00000371419 FXYD5Q96DB9 178 aa11.82□□□□□ -0.52
PFDN4-201ENST00000371419 YPEL4Q96NS1 127 aa11.82□□□□□ -0.52
PFDN4-201ENST00000371419 SOCS3O14543 225 aa11.81□□□□□ -0.52
PFDN4-201ENST00000371419 PPP1R2P9O14990 202 aa11.81□□□□□ -0.52
PFDN4-201ENST00000371419 MRPS12O15235 138 aaKnown RBP11.81□□□□□ -0.52
PFDN4-201ENST00000371419 RAB5AP20339 215 aa11.81□□□□□ -0.52
PFDN4-201ENST00000371419 PSMG4Q5JS54 123 aa11.81□□□□□ -0.52
PFDN4-201ENST00000371419 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.81□□□□□ -0.52
PFDN4-201ENST00000371419 C17orf77Q96MU5 243 aa11.81□□□□□ -0.52
PFDN4-201ENST00000371419 TMEM14CQ9P0S9 112 aa11.81□□□□□ -0.52
PFDN4-201ENST00000371419 A0A087X0K7 114 aa11.8□□□□□ -0.52
PFDN4-201ENST00000371419 LOC105371267A0A1B0GV96 52 aa11.8□□□□□ -0.52
PFDN4-201ENST00000371419 RBMY1BA6NDE4 496 aaKnown RBP11.8□□□□□ -0.52
PFDN4-201ENST00000371419 RBMY1EA6NEQ0 496 aaKnown RBP11.8□□□□□ -0.52
PFDN4-201ENST00000371419 ISLRO14498 428 aa11.8□□□□□ -0.52
PFDN4-201ENST00000371419 RBMY1DP0C7P1 496 aaKnown RBP11.8□□□□□ -0.52
PFDN4-201ENST00000371419 PYYP10082 97 aa11.8□□□□□ -0.52
PFDN4-201ENST00000371419 SUMO1P63165 101 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms