RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 CSMD1Q96PZ7 3565 aa7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 HOXB4P17483 251 aaPredicted RBP7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 GCSHP23434 173 aa7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 TTTY13Q9BZ97 58 aa7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 SH2D6Q7Z4S9 175 aa7.9□□□□□ -1.14
PRPF38B-203ENST00000370025 STXBP6Q8NFX7 210 aa7.9□□□□□ -1.14
PRPF38B-203ENST00000370025 CFAP46Q8IYW2 2715 aa7.9□□□□□ -1.14
PRPF38B-203ENST00000370025 CNIH1O95406 144 aa7.9□□□□□ -1.14
PRPF38B-203ENST00000370025 AREGP15514 252 aa7.9□□□□□ -1.14
PRPF38B-203ENST00000370025 CRYBA4P53673 196 aa7.9□□□□□ -1.14
PRPF38B-203ENST00000370025 ATP5J2P56134 94 aa7.9□□□□□ -1.14
PRPF38B-203ENST00000370025 ATP5G2Q06055 141 aa7.9□□□□□ -1.14
PRPF38B-203ENST00000370025 C2orf91Q6ZV80 131 aa7.9□□□□□ -1.14
PRPF38B-203ENST00000370025 CFHR4Q92496 578 aa7.9□□□□□ -1.14
PRPF38B-203ENST00000370025 NPFFR1Q9GZQ6 430 aa7.9□□□□□ -1.14
PRPF38B-203ENST00000370025 DOPEY1Q5JWR5 2465 aa7.9□□□□□ -1.15
PRPF38B-203ENST00000370025 C9orf118A6NHY6 69 aa7.9□□□□□ -1.15
PRPF38B-203ENST00000370025 K7EP34 96 aa7.9□□□□□ -1.15
PRPF38B-203ENST00000370025 NBR2O15453 112 aa7.9□□□□□ -1.15
PRPF38B-203ENST00000370025 TMEM249Q2WGJ8 235 aa7.9□□□□□ -1.15
PRPF38B-203ENST00000370025 FAM120AOSQ5T036 256 aa7.9□□□□□ -1.15
PRPF38B-203ENST00000370025 LCNL1Q6ZST4 164 aa7.9□□□□□ -1.15
PRPF38B-203ENST00000370025 NPIPB3Q92617 1050 aa7.9□□□□□ -1.15
PRPF38B-203ENST00000370025 A6NDN8 102 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 PRR20EP86478 221 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 PRR20CP86479 221 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 PRR20DP86480 221 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 PRR20BP86481 221 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 PRR20AP86496 221 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 HSD52Q0P140 79 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 ZNF503Q96F45 646 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 SRSF8Q9BRL6 282 aaKnown RBP7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 UBE2E1P51965 193 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 SRSF12Q8WXF0 261 aaKnown RBP7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 C11orf52Q96A22 123 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 ATP6V0BQ99437 205 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 DCHS2Q6V1P9 2916 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 SERTM2A0A1B0GWG4 89 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 K7EQM0 130 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 FABP2P12104 132 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 LYZP61626 148 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 PSG3Q16557 428 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 COX19Q49B96 90 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 NPBQ8NG41 125 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 C19orf24Q9BVV8 132 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 TMEM167BQ9NRX6 74 aa7.89□□□□□ -1.15
PRPF38B-203ENST00000370025 TLN2Q9Y4G6 2542 aa7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 COX6B1P14854 86 aa7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 FCGR2BP31994 310 aaPredicted RBP7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 RPS20P60866 119 aaKnown RBP7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 ETDBQ3ZM63 59 aa7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 AMTNQ6UX39 209 aa7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 PCP2Q8IVA1 136 aa7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 C10orf105Q8TEF2 133 aa7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 C1RLQ9NZP8 487 aa7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 FAM106CPP0CH98 169 aa7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 PPIFP30405 207 aaKnown RBP7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 FAM106AQ4KMX7 169 aa7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 UFSP1Q6NVU6 142 aa7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 SFTA2Q6UW10 78 aa7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 ADAMTSL5Q6ZMM2 481 aa7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 IGKV1OR2-108A0A075B7D4 117 aa7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 NDUFA3O95167 84 aa7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 APOHP02749 345 aaPredicted RBP7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 WFDC2Q14508 124 aa7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 PRSS3P2Q8NHM4 247 aa7.88□□□□□ -1.15
PRPF38B-203ENST00000370025 GAGE12HA6NDE8 117 aa7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 TEX22C9J3V5 150 aa7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 COX8AP10176 69 aa7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 TAS2R45P59539 299 aa7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 HBBP68871 147 aa7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 HSPB8Q9UJY1 196 aa7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 SAMD5Q5TGI4 173 aa7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 LINC00322Q6ZN03 302 aaPredicted RBP7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 ARPC1AQ92747 370 aa7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 CENPEQ02224 2701 aa7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 TRAV8-1A0A0A6YYK1 113 aa7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 A0A1W2PPM0 123 aa7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 NCBP2LA6PVI3 153 aaKnown RBP7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 FCER1GP30273 86 aa7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 C5orf64Q2M2E5 130 aa7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 PVRIGQ6DKI7 326 aa7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 DYNAPQ8N1N2 210 aa7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 MBD6Q96DN6 1003 aa7.87□□□□□ -1.15
PRPF38B-203ENST00000370025 IGHV4-61A0A0C4DH41 118 aa7.86□□□□□ -1.15
PRPF38B-203ENST00000370025 A1L4Q6 167 aa7.86□□□□□ -1.15
PRPF38B-203ENST00000370025 A8MWL6 223 aa7.86□□□□□ -1.15
PRPF38B-203ENST00000370025 INSL3P51460 131 aa7.86□□□□□ -1.15
PRPF38B-203ENST00000370025 CACNG7P62955 275 aa7.86□□□□□ -1.15
PRPF38B-203ENST00000370025 Q71RC1 249 aaPredicted RBP7.86□□□□□ -1.15
PRPF38B-203ENST00000370025 OR1L4Q8NGR5 311 aa7.86□□□□□ -1.15
PRPF38B-203ENST00000370025 C18orf15Q96N68 181 aa7.86□□□□□ -1.15
PRPF38B-203ENST00000370025 LY96Q9Y6Y9 160 aa7.86□□□□□ -1.15
PRPF38B-203ENST00000370025 C2CD3Q4AC94 2353 aa7.86□□□□□ -1.15
PRPF38B-203ENST00000370025 SORL1Q92673 2214 aa7.86□□□□□ -1.15
PRPF38B-203ENST00000370025 PGPA6NDG6 321 aa7.86□□□□□ -1.15
PRPF38B-203ENST00000370025 SEC11AP67812 179 aa7.86□□□□□ -1.15
PRPF38B-203ENST00000370025 EBI3Q14213 229 aa7.86□□□□□ -1.15
PRPF38B-203ENST00000370025 NEGR1Q7Z3B1 354 aa7.86□□□□□ -1.15
PRPF38B-203ENST00000370025 GRAMD2BQ96HH9 432 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms