RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 CBLN2Q8IUK8 224 aa13.87□□□□□ -0.19
LMNA-204ENST00000368298 PFDN5Q99471 154 aa13.87□□□□□ -0.19
LMNA-204ENST00000368298 SRD5A3Q9H8P0 318 aa13.87□□□□□ -0.19
LMNA-204ENST00000368298 MAP6D1Q9H9H5 199 aa13.87□□□□□ -0.19
LMNA-204ENST00000368298 RPS10P5Q9NQ39 176 aa13.87□□□□□ -0.19
LMNA-204ENST00000368298 C7orf77A4D0Y5 90 aa13.86□□□□□ -0.19
LMNA-204ENST00000368298 GALR1P47211 349 aa13.86□□□□□ -0.19
LMNA-204ENST00000368298 UBE2G2P60604 165 aa13.86□□□□□ -0.19
LMNA-204ENST00000368298 C10orf113Q5VZT2 155 aa13.86□□□□□ -0.19
LMNA-204ENST00000368298 LINC00305Q7Z4B0 112 aa13.86□□□□□ -0.19
LMNA-204ENST00000368298 FAM24BQ8N5W8 94 aa13.86□□□□□ -0.19
LMNA-204ENST00000368298 OR1L4Q8NGR5 311 aa13.86□□□□□ -0.19
LMNA-204ENST00000368298 MRPL32Q9BYC8 188 aaKnown RBP13.86□□□□□ -0.19
LMNA-204ENST00000368298 RBMY1BA6NDE4 496 aaKnown RBP13.85□□□□□ -0.19
LMNA-204ENST00000368298 RBMY1EA6NEQ0 496 aaKnown RBP13.85□□□□□ -0.19
LMNA-204ENST00000368298 RBMY1DP0C7P1 496 aaKnown RBP13.85□□□□□ -0.19
LMNA-204ENST00000368298 RPL7P18124 248 aaKnown RBP13.85□□□□□ -0.19
LMNA-204ENST00000368298 RHEBQ15382 184 aa13.85□□□□□ -0.19
LMNA-204ENST00000368298 LEMD1Q68G75 181 aa13.85□□□□□ -0.19
LMNA-204ENST00000368298 TVP23CQ96ET8 276 aa13.85□□□□□ -0.19
LMNA-204ENST00000368298 C17orf77Q96MU5 243 aa13.85□□□□□ -0.19
LMNA-204ENST00000368298 NIPSNAP3BQ9BS92 247 aa13.85□□□□□ -0.19
LMNA-204ENST00000368298 C11orf94C9JXX5 98 aa13.84□□□□□ -0.19
LMNA-204ENST00000368298 TMEM250H0YL14 139 aa13.84□□□□□ -0.19
LMNA-204ENST00000368298 SOCS3O14543 225 aa13.84□□□□□ -0.19
LMNA-204ENST00000368298 NHLRC4P0CG21 123 aaPredicted RBP13.84□□□□□ -0.19
LMNA-204ENST00000368298 MEOX2P50222 304 aa13.84□□□□□ -0.19
LMNA-204ENST00000368298 TAS2R45P59539 299 aa13.84□□□□□ -0.19
LMNA-204ENST00000368298 SAMD13Q5VXD3 122 aa13.84□□□□□ -0.19
LMNA-204ENST00000368298 CST9LP1Q5W188 147 aa13.84□□□□□ -0.19
LMNA-204ENST00000368298 SBSPONQ8IVN8 264 aa13.84□□□□□ -0.19
LMNA-204ENST00000368298 MRPS12O15235 138 aaKnown RBP13.83□□□□□ -0.2
LMNA-204ENST00000368298 AKR1C3P42330 323 aa13.83□□□□□ -0.2
LMNA-204ENST00000368298 DEFB131AP59861 70 aa13.83□□□□□ -0.2
LMNA-204ENST00000368298 ATP5G3P48201 142 aa13.82□□□□□ -0.2
LMNA-204ENST00000368298 SNRPD3P62318 126 aaKnown RBP13.82□□□□□ -0.2
LMNA-204ENST00000368298 MORN5Q5VZ52 161 aa13.82□□□□□ -0.2
LMNA-204ENST00000368298 APRG1Q8IVJ8 170 aa13.82□□□□□ -0.2
LMNA-204ENST00000368298 TXNDC17Q9BRA2 123 aa13.82□□□□□ -0.2
LMNA-204ENST00000368298 SMCO4Q9NRQ5 59 aa13.82□□□□□ -0.2
LMNA-204ENST00000368298 A0A087X0K7 114 aa13.81□□□□□ -0.2
LMNA-204ENST00000368298 ZNF727A8MUV8 499 aa13.81□□□□□ -0.2
LMNA-204ENST00000368298 F6UZH7 168 aa13.81□□□□□ -0.2
LMNA-204ENST00000368298 ZNF688P0C7X2 276 aa13.81□□□□□ -0.2
LMNA-204ENST00000368298 PQLC2Q6ZP29 291 aa13.81□□□□□ -0.2
LMNA-204ENST00000368298 RPUSD4Q96CM3 377 aaKnown RBP13.81□□□□□ -0.2
LMNA-204ENST00000368298 SMIM7Q9BQ49 75 aa13.81□□□□□ -0.2
LMNA-204ENST00000368298 TMEM167BQ9NRX6 74 aa13.81□□□□□ -0.2
LMNA-204ENST00000368298 LOC102724200A0A096LPH7 203 aaPredicted RBP13.8□□□□□ -0.2
LMNA-204ENST00000368298 ISLRO14498 428 aa13.8□□□□□ -0.2
LMNA-204ENST00000368298 PDE6DO43924 150 aa13.8□□□□□ -0.2
LMNA-204ENST00000368298 OR7C2O60412 319 aa13.8□□□□□ -0.2
LMNA-204ENST00000368298 ID1P41134 155 aa13.8□□□□□ -0.2
LMNA-204ENST00000368298 ZNF674Q2M3X9 581 aa13.8□□□□□ -0.2
LMNA-204ENST00000368298 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.8□□□□□ -0.2
LMNA-204ENST00000368298 BPIFA4PQ86YQ2 179 aa13.8□□□□□ -0.2
LMNA-204ENST00000368298 ZNF503Q96F45 646 aa13.8□□□□□ -0.2
LMNA-204ENST00000368298 TM2D3Q9BRN9 247 aa13.8□□□□□ -0.2
LMNA-204ENST00000368298 YTHDF2Q9Y5A9 579 aaKnown RBP13.8□□□□□ -0.2
LMNA-204ENST00000368298 TRAV5A0A0B4J249 113 aa13.8□□□□□ -0.2
LMNA-204ENST00000368298 ZNF124Q15973 351 aa13.8□□□□□ -0.2
LMNA-204ENST00000368298 FAM167A-AS1Q96KT0 104 aa13.8□□□□□ -0.2
LMNA-204ENST00000368298 SLC25A2Q9BXI2 301 aa13.8□□□□□ -0.2
LMNA-204ENST00000368298 PARLQ9H300 379 aa13.8□□□□□ -0.2
LMNA-204ENST00000368298 SDF2L1Q9HCN8 221 aa13.8□□□□□ -0.2
LMNA-204ENST00000368298 COL7A1Q02388 2944 aa13.79□□□□□ -0.2
LMNA-204ENST00000368298 KIR2DL5BA0A0G2JN68 375 aa13.79□□□□□ -0.2
LMNA-204ENST00000368298 KIR2DL5BA0A0G2JPC4 375 aa13.79□□□□□ -0.2
LMNA-204ENST00000368298 ATF4P18848 351 aaPredicted RBP13.79□□□□□ -0.2
LMNA-204ENST00000368298 PNRC1Q12796 327 aaPredicted RBP13.79□□□□□ -0.2
LMNA-204ENST00000368298 PSMG4Q5JS54 123 aa13.79□□□□□ -0.2
LMNA-204ENST00000368298 KIR2DL5AQ8N109 375 aa13.79□□□□□ -0.2
LMNA-204ENST00000368298 KIR2DL5BQ8NHK3 375 aa13.79□□□□□ -0.2
LMNA-204ENST00000368298 ASCL2Q99929 193 aa13.79□□□□□ -0.2
LMNA-204ENST00000368298 NAT8Q9UHE5 227 aa13.79□□□□□ -0.2
LMNA-204ENST00000368298 ARL2-SNX15V9GYD0 113 aa13.79□□□□□ -0.2
LMNA-204ENST00000368298 TMEM14CQ9P0S9 112 aa13.78□□□□□ -0.2
LMNA-204ENST00000368298 IGLC2P0DOY2 106 aa13.77□□□□□ -0.21
LMNA-204ENST00000368298 TMEM241Q24JQ0 296 aa13.77□□□□□ -0.21
LMNA-204ENST00000368298 DNAH9Q9NYC9 4486 aa13.77□□□□□ -0.21
LMNA-204ENST00000368298 A0A087WWC5 75 aa13.76□□□□□ -0.21
LMNA-204ENST00000368298 B4DEV8 164 aa13.76□□□□□ -0.21
LMNA-204ENST00000368298 OR10J4P0C629 311 aa13.76□□□□□ -0.21
LMNA-204ENST00000368298 C16orf92Q96LL3 132 aa13.76□□□□□ -0.21
LMNA-204ENST00000368298 PAXXQ9BUH6 204 aa13.76□□□□□ -0.21
LMNA-204ENST00000368298 TRAV8-2A0A0B4J237 113 aa13.75□□□□□ -0.21
LMNA-204ENST00000368298 SCO2A0A1W2PP80 73 aa13.75□□□□□ -0.21
LMNA-204ENST00000368298 UBE2CO00762 179 aa13.75□□□□□ -0.21
LMNA-204ENST00000368298 APOC4P55056 127 aa13.75□□□□□ -0.21
LMNA-204ENST00000368298 UBE2L3P68036 154 aaKnown RBP13.75□□□□□ -0.21
LMNA-204ENST00000368298 C15orf54Q8N8G6 183 aa13.75□□□□□ -0.21
LMNA-204ENST00000368298 NDUFB4O95168 129 aa13.74□□□□□ -0.21
LMNA-204ENST00000368298 ADIRFQ15847 76 aa13.74□□□□□ -0.21
LMNA-204ENST00000368298 TRPT1Q86TN4 253 aaKnown RBP13.74□□□□□ -0.21
LMNA-204ENST00000368298 STHQ8IWL8 128 aa13.74□□□□□ -0.21
LMNA-204ENST00000368298 SPATA25Q9BR10 227 aa13.74□□□□□ -0.21
LMNA-204ENST00000368298 OR51M1Q9H341 326 aa13.74□□□□□ -0.21
LMNA-204ENST00000368298 KNCNA6PVL3 124 aa13.74□□□□□ -0.21
LMNA-204ENST00000368298 COLCA2A8K830 154 aa13.74□□□□□ -0.21
LMNA-204ENST00000368298 PYYP10082 97 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms