RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 NPIPB5A8MRT5 1133 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 RPL32P62910 135 aaKnown RBP7.38□□□□□ -1.23
CALD1-202ENST00000361901 BRD3OSQ6XYD6 125 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 KIR3DL3Q8N743 410 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 A0A1W2PRE2 83 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 SCGB1C2P0DMR2 95 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 PPIFP30405 207 aaKnown RBP7.38□□□□□ -1.23
CALD1-202ENST00000361901 KLF17Q5JT82 389 aaPredicted RBP7.38□□□□□ -1.23
CALD1-202ENST00000361901 SFTA2Q6UW10 78 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 C8orf86Q6ZUL3 223 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 PDPNQ86YL7 162 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 TXNDC17Q9BRA2 123 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 C1QTNF4Q9BXJ3 329 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 C15orf62A8K5M9 175 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 BRWD1-AS2P59051 145 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 TMEM14EPQ6UXP3 125 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 RASL11BQ9BPW5 248 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 PIMREGQ9BSJ6 248 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 SPXQ9BT56 116 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 LINC00527Q9UJ94 153 aa7.38□□□□□ -1.23
CALD1-202ENST00000361901 IGHV1-3A0A0C4DH29 117 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 VMO1Q7Z5L0 202 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 SGK494Q96LW2 274 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 H3BMG7 143 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 EMP1P54849 157 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 VGLL1Q99990 258 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 RABAC1Q9UI14 185 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 PRRC2AP48634 2157 aaKnown RBP7.37□□□□□ -1.23
CALD1-202ENST00000361901 FLNCQ14315 2725 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 BUB1B-PAK6H3BSN5 160 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 LINC00310P59036 64 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 UBE2L3P68036 154 aaKnown RBP7.37□□□□□ -1.23
CALD1-202ENST00000361901 CX3CL1P78423 397 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 TMEM30BQ3MIR4 351 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 SPATA12Q7Z6I5 190 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 PPP1R27Q86WC6 154 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 GATA3P23771 443 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 AMTNQ6UX39 209 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 TREML4Q6UXN2 200 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 NEGR1Q7Z3B1 354 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 BCL6BQ8N143 479 aaPredicted RBP7.37□□□□□ -1.23
CALD1-202ENST00000361901 OR4X2Q8NGF9 303 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 RITA1Q96K30 269 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 NDFIP1Q9BT67 221 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 C7orf69Q9H7B7 122 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 TIMM9Q9Y5J7 89 aa7.37□□□□□ -1.23
CALD1-202ENST00000361901 RPL11P62913 178 aaKnown RBP7.36□□□□□ -1.23
CALD1-202ENST00000361901 VWC2Q2TAL6 325 aa7.36□□□□□ -1.23
CALD1-202ENST00000361901 TCF24Q7RTU0 167 aa7.36□□□□□ -1.23
CALD1-202ENST00000361901 TMEM219Q86XT9 240 aa7.36□□□□□ -1.23
CALD1-202ENST00000361901 FCGR2BP31994 310 aaPredicted RBP7.36□□□□□ -1.23
CALD1-202ENST00000361901 OR5AN1Q8NGI8 311 aa7.36□□□□□ -1.23
CALD1-202ENST00000361901 JMJD8Q96S16 334 aa7.36□□□□□ -1.23
CALD1-202ENST00000361901 SPAG8Q99932 426 aaPredicted RBP7.36□□□□□ -1.23
CALD1-202ENST00000361901 TMEM189A5PLL7 270 aa7.36□□□□□ -1.23
CALD1-202ENST00000361901 FOXH1O75593 365 aa7.36□□□□□ -1.23
CALD1-202ENST00000361901 CT45A10P0DMU9 189 aa7.36□□□□□ -1.23
CALD1-202ENST00000361901 AREGP15514 252 aa7.36□□□□□ -1.23
CALD1-202ENST00000361901 PRCDQ00LT1 54 aa7.36□□□□□ -1.23
CALD1-202ENST00000361901 Q8N976 141 aa7.36□□□□□ -1.23
CALD1-202ENST00000361901 SRSF12Q8WXF0 261 aaKnown RBP7.36□□□□□ -1.23
CALD1-202ENST00000361901 TACC2O95359 2948 aa7.36□□□□□ -1.23
CALD1-202ENST00000361901 ANKRD17O75179 2603 aaKnown RBP7.35□□□□□ -1.23
CALD1-202ENST00000361901 IGHV3OR16-13A0A075B7E8 117 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 IGHV3-74A0A0B4J1X5 117 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 TRAV40A0A0B4J280 105 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 KHDC1LQ5JSQ8 128 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 SLC25A33Q9BSK2 321 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 GGTLC1Q9BX51 225 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 IGKV3-7A0A075B6H7 116 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 A8MWL6 223 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 F8W1H4 67 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 FAM106CPP0CH98 169 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 NPPCP23582 126 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 FBXL19-AS1Q494R0 122 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 CENPVQ7Z7K6 275 aaPredicted RBP7.35□□□□□ -1.23
CALD1-202ENST00000361901 C20orf78Q9BR46 151 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 IGSF10Q6WRI0 2623 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 JMJD1CQ15652 2540 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 LOC389332A0A1B0GUA5 103 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 IZUMO1RA6ND01 250 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 TMEM8BA6NDV4 472 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 TGFAP01135 160 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 COX8AP10176 69 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 C10orf113Q5VZT2 155 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 C3orf56Q8N813 242 aa7.35□□□□□ -1.23
CALD1-202ENST00000361901 VDAC2P45880 294 aaPredicted RBP7.34□□□□□ -1.23
CALD1-202ENST00000361901 MIR17HGQ75NE6 70 aa7.34□□□□□ -1.23
CALD1-202ENST00000361901 AP5S1Q9NUS5 200 aa7.34□□□□□ -1.23
CALD1-202ENST00000361901 C1RLQ9NZP8 487 aa7.34□□□□□ -1.23
CALD1-202ENST00000361901 PRSS29PA6NIE9 313 aa7.34□□□□□ -1.23
CALD1-202ENST00000361901 SMAD7O15105 426 aaKnown RBP7.34□□□□□ -1.23
CALD1-202ENST00000361901 ZNF138P52744 262 aa7.34□□□□□ -1.23
CALD1-202ENST00000361901 SP5Q6BEB4 398 aaPredicted RBP7.34□□□□□ -1.23
CALD1-202ENST00000361901 ODF3L1Q8IXM7 274 aa7.34□□□□□ -1.23
CALD1-202ENST00000361901 GRAMD2BQ96HH9 432 aa7.34□□□□□ -1.23
CALD1-202ENST00000361901 KAAG1Q9UBP8 84 aa7.34□□□□□ -1.23
CALD1-202ENST00000361901 FOXA2Q9Y261 457 aaPredicted RBP7.34□□□□□ -1.23
CALD1-202ENST00000361901 WDR83OSQ9Y284 106 aa7.34□□□□□ -1.23
CALD1-202ENST00000361901 A0A1W2PPR1 153 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms