RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 TRAV13-2A0A0B4J235 113 aa14.22□□□□□ -0.13
CACNA1A-201ENST00000360228 ACYP1P07311 99 aa14.22□□□□□ -0.13
CACNA1A-201ENST00000360228 MP68P56378 58 aa14.22□□□□□ -0.13
CACNA1A-201ENST00000360228 DSCAMO60469 2012 aa14.22□□□□□ -0.13
CACNA1A-201ENST00000360228 SIP14410 1827 aa14.22□□□□□ -0.13
CACNA1A-201ENST00000360228 GREM1O60565 184 aa14.22□□□□□ -0.13
CACNA1A-201ENST00000360228 V9GYY9 64 aa14.22□□□□□ -0.13
CACNA1A-201ENST00000360228 C5orf67F2Z3F1 127 aa14.22□□□□□ -0.13
CACNA1A-201ENST00000360228 STPG4Q8N801 248 aa14.21□□□□□ -0.13
CACNA1A-201ENST00000360228 FNDC1Q4ZHG4 1894 aaPredicted RBP14.21□□□□□ -0.13
CACNA1A-201ENST00000360228 TRBV25-1A0A075B6N4 114 aa14.21□□□□□ -0.13
CACNA1A-201ENST00000360228 ZNF362Q5T0B9 420 aaPredicted RBP14.21□□□□□ -0.13
CACNA1A-201ENST00000360228 MSRB2Q9Y3D2 182 aa14.21□□□□□ -0.13
CACNA1A-201ENST00000360228 TINCRA0A1B0GVN0 87 aa14.21□□□□□ -0.13
CACNA1A-201ENST00000360228 F6UB75 175 aa14.21□□□□□ -0.13
CACNA1A-201ENST00000360228 KLF5Q13887 457 aaPredicted RBP14.21□□□□□ -0.14
CACNA1A-201ENST00000360228 A0A0G2JMZ2 1700 aa14.21□□□□□ -0.14
CACNA1A-201ENST00000360228 LRRC37A2A6NM11 1700 aa14.21□□□□□ -0.14
CACNA1A-201ENST00000360228 LRRC37AA6NMS7 1700 aa14.21□□□□□ -0.14
CACNA1A-201ENST00000360228 A0A1W2PR77 199 aa14.2□□□□□ -0.14
CACNA1A-201ENST00000360228 IGHV2-26A0A0B4J1V2 119 aa14.2□□□□□ -0.14
CACNA1A-201ENST00000360228 HLA-DMBP28068 263 aa14.2□□□□□ -0.14
CACNA1A-201ENST00000360228 VSIRQ9H7M9 311 aa14.2□□□□□ -0.14
CACNA1A-201ENST00000360228 RS1O15537 224 aa14.2□□□□□ -0.14
CACNA1A-201ENST00000360228 TMEM256Q8N2U0 113 aa14.2□□□□□ -0.14
CACNA1A-201ENST00000360228 FAM208BQ5VWN6 2430 aa14.2□□□□□ -0.14
CACNA1A-201ENST00000360228 PIP4P2Q8N4L2 257 aa14.2□□□□□ -0.14
CACNA1A-201ENST00000360228 NLRC5Q86WI3 1866 aa14.2□□□□□ -0.14
CACNA1A-201ENST00000360228 AGMATQ9BSE5 352 aa14.19□□□□□ -0.14
CACNA1A-201ENST00000360228 TRPT1Q86TN4 253 aaKnown RBP14.19□□□□□ -0.14
CACNA1A-201ENST00000360228 A0A1W2PPM0 123 aa14.19□□□□□ -0.14
CACNA1A-201ENST00000360228 ETDBQ3ZM63 59 aa14.19□□□□□ -0.14
CACNA1A-201ENST00000360228 IGHV3-16A0A0C4DH30 117 aa14.19□□□□□ -0.14
CACNA1A-201ENST00000360228 C4orf51C9J302 202 aa14.19□□□□□ -0.14
CACNA1A-201ENST00000360228 KIAA1549LQ6ZVL6 1849 aa14.18□□□□□ -0.14
CACNA1A-201ENST00000360228 PRSS57Q6UWY2 283 aa14.18□□□□□ -0.14
CACNA1A-201ENST00000360228 LY96Q9Y6Y9 160 aa14.18□□□□□ -0.14
CACNA1A-201ENST00000360228 IGFBP3P17936 291 aaPredicted RBP14.18□□□□□ -0.14
CACNA1A-201ENST00000360228 MPZP25189 248 aa14.18□□□□□ -0.14
CACNA1A-201ENST00000360228 TREML4Q6UXN2 200 aa14.18□□□□□ -0.14
CACNA1A-201ENST00000360228 TP53TG1Q9Y2A0 90 aa14.18□□□□□ -0.14
CACNA1A-201ENST00000360228 TRGV9Q99603 122 aa14.18□□□□□ -0.14
CACNA1A-201ENST00000360228 PRO1854Q9UHT4 67 aa14.18□□□□□ -0.14
CACNA1A-201ENST00000360228 DAD1P61803 113 aa14.18□□□□□ -0.14
CACNA1A-201ENST00000360228 SPATA31B1PQ5VZV4 182 aa14.18□□□□□ -0.14
CACNA1A-201ENST00000360228 IGKV1D-43A0A0B4J1Z2 117 aa14.18□□□□□ -0.14
CACNA1A-201ENST00000360228 C3orf56Q8N813 242 aa14.18□□□□□ -0.14
CACNA1A-201ENST00000360228 K7EP34 96 aa14.18□□□□□ -0.14
CACNA1A-201ENST00000360228 DKK1O94907 266 aa14.17□□□□□ -0.14
CACNA1A-201ENST00000360228 SUPT4H1P63272 117 aaKnown RBP14.17□□□□□ -0.14
CACNA1A-201ENST00000360228 ZNF664Q8N3J9 261 aa14.17□□□□□ -0.14
CACNA1A-201ENST00000360228 WFDC1Q9HC57 220 aa14.17□□□□□ -0.14
CACNA1A-201ENST00000360228 K7ERS5 55 aa14.17□□□□□ -0.14
CACNA1A-201ENST00000360228 C14orf132Q9NPU4 83 aa14.17□□□□□ -0.14
CACNA1A-201ENST00000360228 U3KQE9 123 aa14.17□□□□□ -0.14
CACNA1A-201ENST00000360228 C3orf79P0CE67 100 aa14.17□□□□□ -0.14
CACNA1A-201ENST00000360228 SMIM2Q9BVW6 85 aa14.17□□□□□ -0.14
CACNA1A-201ENST00000360228 IGHV1-24A0A0C4DH33 117 aa14.17□□□□□ -0.14
CACNA1A-201ENST00000360228 FAM104BQ5XKR9 115 aa14.17□□□□□ -0.14
CACNA1A-201ENST00000360228 TANC1Q9C0D5 1861 aa14.16□□□□□ -0.14
CACNA1A-201ENST00000360228 C9orf106Q8NAJ2 232 aa14.16□□□□□ -0.14
CACNA1A-201ENST00000360228 SPTSSBQ8NFR3 76 aa14.16□□□□□ -0.14
CACNA1A-201ENST00000360228 ZNF837Q96EG3 531 aaPredicted RBP14.16□□□□□ -0.14
CACNA1A-201ENST00000360228 NXPH4O95158 308 aa14.16□□□□□ -0.14
CACNA1A-201ENST00000360228 CLPSL2Q6UWE3 100 aa14.16□□□□□ -0.14
CACNA1A-201ENST00000360228 PKIGQ9Y2B9 76 aa14.15□□□□□ -0.14
CACNA1A-201ENST00000360228 LINC01551Q86U37 167 aa14.15□□□□□ -0.14
CACNA1A-201ENST00000360228 CTHRC1Q96CG8 243 aa14.15□□□□□ -0.14
CACNA1A-201ENST00000360228 NOTCH4Q99466 2003 aa14.15□□□□□ -0.14
CACNA1A-201ENST00000360228 I3L3M4 83 aa14.15□□□□□ -0.14
CACNA1A-201ENST00000360228 FUSP35637 526 aaKnown RBP eCLIP14.15□□□□□ -0.14
CACNA1A-201ENST00000360228 IGFL4Q6B9Z1 124 aa14.15□□□□□ -0.14
CACNA1A-201ENST00000360228 COL11A2P13942 1736 aaPredicted RBP14.15□□□□□ -0.14
CACNA1A-201ENST00000360228 LINC00271P0C7V0 271 aa14.15□□□□□ -0.14
CACNA1A-201ENST00000360228 CDKN1BP46527 198 aa14.15□□□□□ -0.14
CACNA1A-201ENST00000360228 COLCA2A8K830 154 aa14.15□□□□□ -0.14
CACNA1A-201ENST00000360228 PYY3Q5JQD4 70 aa14.15□□□□□ -0.14
CACNA1A-201ENST00000360228 C15orf53Q8NAA6 179 aa14.15□□□□□ -0.14
CACNA1A-201ENST00000360228 UBE2BP63146 152 aa14.15□□□□□ -0.14
CACNA1A-201ENST00000360228 TMEM200BQ69YZ2 307 aa14.15□□□□□ -0.14
CACNA1A-201ENST00000360228 FNDC10F2Z333 226 aa14.14□□□□□ -0.15
CACNA1A-201ENST00000360228 GLRX5Q86SX6 157 aa14.14□□□□□ -0.15
CACNA1A-201ENST00000360228 CARD19Q96LW7 228 aa14.14□□□□□ -0.15
CACNA1A-201ENST00000360228 FAM223BA6NKX1 122 aa14.14□□□□□ -0.15
CACNA1A-201ENST00000360228 FAM223AQ8IWN6 122 aa14.14□□□□□ -0.15
CACNA1A-201ENST00000360228 USMG5Q96IX5 58 aa14.14□□□□□ -0.15
CACNA1A-201ENST00000360228 MUSTN1Q8IVN3 82 aa14.14□□□□□ -0.15
CACNA1A-201ENST00000360228 SPANXB1Q9NS25 103 aaPredicted RBP14.14□□□□□ -0.15
CACNA1A-201ENST00000360228 FGF16O43320 207 aa14.14□□□□□ -0.15
CACNA1A-201ENST00000360228 IL17RELQ6ZVW7 336 aa14.14□□□□□ -0.15
CACNA1A-201ENST00000360228 CEND1Q8N111 149 aa14.14□□□□□ -0.15
CACNA1A-201ENST00000360228 C9orf139Q6ZV77 190 aa14.14□□□□□ -0.15
CACNA1A-201ENST00000360228 C20orf144Q9BQM9 153 aa14.14□□□□□ -0.15
CACNA1A-201ENST00000360228 DKK4Q9UBT3 224 aa14.14□□□□□ -0.15
CACNA1A-201ENST00000360228 COLQQ9Y215 455 aaPredicted RBP14.14□□□□□ -0.15
CACNA1A-201ENST00000360228 OR11H6Q8NGC7 330 aa14.13□□□□□ -0.15
CACNA1A-201ENST00000360228 RNF114Q9Y508 228 aa14.13□□□□□ -0.15
CACNA1A-201ENST00000360228 IGHV1-3A0A0C4DH29 117 aa14.13□□□□□ -0.15
CACNA1A-201ENST00000360228 H3BUX3 64 aa14.13□□□□□ -0.15
CACNA1A-201ENST00000360228 FAM166AQ6J272 317 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms