RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 KLK10O43240 276 aa6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 APOHP02749 345 aaPredicted RBP6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 TNFRSF1AP19438 455 aa6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 CD40P25942 277 aa6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 CSN1S1P47710 185 aa6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 Q6ZUT4 128 aa6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 BCL6BQ8N143 479 aaPredicted RBP6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 TMEM167AQ8TBQ9 72 aa6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 CITED1Q99966 193 aa6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 CDIP1Q9H305 208 aa6.56□□□□□ -1.36
CDC42SE1-201ENST00000357235 DSCAML1Q8TD84 2053 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 IGLV3-9A0A075B6K5 115 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 K7ERJ3 54 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 NDUFB3O43676 98 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 NCR2O95944 276 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 ARMS2P0C7Q2 107 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 NMUP48645 174 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 ZNF502Q8TBZ5 544 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 ZNF747Q9BV97 191 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 C7orf69Q9H7B7 122 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 AP5S1Q9NUS5 200 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 SVEP1Q4LDE5 3571 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 RPL27AP46776 148 aaKnown RBP6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 FXYD2P54710 66 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 DEFB124Q8NES8 71 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 FMC1Q96HJ9 113 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 RAX2Q96IS3 184 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 C17orf77Q96MU5 243 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 C18orf15Q96N68 181 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 NHP2Q9NX24 153 aaKnown RBP6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 HIGD1AQ9Y241 93 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 ZGRF1Q86YA3 2104 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 PIEZO1Q92508 2521 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 APC2O95996 2303 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 COX7A1P24310 79 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 GATA4P43694 442 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 XGP55808 180 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 ZFAND6Q6FIF0 208 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 ASCL5Q7RTU5 278 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 WFDC3Q8IUB2 231 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 SRSF8Q9BRL6 282 aaKnown RBP6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 MLST8Q9BVC4 326 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 YAE1D1Q9NRH1 226 aa6.55□□□□□ -1.36
CDC42SE1-201ENST00000357235 RAI1Q7Z5J4 1906 aaPredicted RBP6.54□□□□□ -1.36
CDC42SE1-201ENST00000357235 E9PLD3 99 aa6.54□□□□□ -1.36
CDC42SE1-201ENST00000357235 FSTL3O95633 263 aa6.54□□□□□ -1.36
CDC42SE1-201ENST00000357235 LTAP01374 205 aa6.54□□□□□ -1.36
CDC42SE1-201ENST00000357235 NBL1P41271 181 aa6.54□□□□□ -1.36
CDC42SE1-201ENST00000357235 FOXI1Q12951 378 aa6.54□□□□□ -1.36
CDC42SE1-201ENST00000357235 PCP2Q8IVA1 136 aa6.54□□□□□ -1.36
CDC42SE1-201ENST00000357235 TM2D2Q9BX73 214 aa6.54□□□□□ -1.36
CDC42SE1-201ENST00000357235 FAM215AQ9Y5M1 114 aa6.54□□□□□ -1.36
CDC42SE1-201ENST00000357235 FAM106CPP0CH98 169 aa6.54□□□□□ -1.36
CDC42SE1-201ENST00000357235 MYCNOSP40205 109 aa6.54□□□□□ -1.36
CDC42SE1-201ENST00000357235 ID1P41134 155 aa6.54□□□□□ -1.36
CDC42SE1-201ENST00000357235 FAM106AQ4KMX7 169 aa6.54□□□□□ -1.36
CDC42SE1-201ENST00000357235 AMTNQ6UX39 209 aa6.54□□□□□ -1.36
CDC42SE1-201ENST00000357235 TEX29Q8N6K0 151 aa6.54□□□□□ -1.36
CDC42SE1-201ENST00000357235 IGFBPL1Q8WX77 278 aa6.54□□□□□ -1.36
CDC42SE1-201ENST00000357235 RASL11BQ9BPW5 248 aa6.54□□□□□ -1.36
CDC42SE1-201ENST00000357235 RELNP78509 3460 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 A0A1B0GUT8 65 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 MBD3L4A6NDZ8 208 aaPredicted RBP6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 MBD3L3A6NE82 208 aaPredicted RBP6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 MBD3L5A6NJ08 208 aaPredicted RBP6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 M0R3E3 92 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 IGLV2-23P01705 113 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 GP9P14770 177 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 ZNF562Q6V9R5 426 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 Q86TA4 180 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 THAP8Q8NA92 274 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 MBD3L2Q8NHZ7 208 aaPredicted RBP6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 PRSS22Q9GZN4 317 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 FBXL15Q9H469 300 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 OTOGLQ3ZCN5 2332 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 GAGE12JA6NER3 117 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 C17orf100A8MU93 164 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 FCN3O75636 299 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 GAGE7O76087 117 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 GAGE12FP0CL80 117 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 GAGE12GP0CL81 117 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 GAGE12IP0CL82 117 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 GAGE4Q13068 117 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 C8orf46Q8TAG6 207 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 DYNLRB1Q9NP97 96 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 KLF12Q9Y4X4 402 aa6.53□□□□□ -1.36
CDC42SE1-201ENST00000357235 C19orf71A6NCJ1 209 aa6.52□□□□□ -1.36
CDC42SE1-201ENST00000357235 PRSS29PA6NIE9 313 aa6.52□□□□□ -1.36
CDC42SE1-201ENST00000357235 FAM90A27PA6NNH2 459 aa6.52□□□□□ -1.36
CDC42SE1-201ENST00000357235 IGLL5B9A064 214 aa6.52□□□□□ -1.36
CDC42SE1-201ENST00000357235 PPIFP30405 207 aaKnown RBP6.52□□□□□ -1.36
CDC42SE1-201ENST00000357235 IFI27P40305 119 aaPredicted RBP6.52□□□□□ -1.36
CDC42SE1-201ENST00000357235 PHLDA1Q8WV24 401 aaPredicted RBP6.52□□□□□ -1.36
CDC42SE1-201ENST00000357235 SLC25A39Q9BZJ4 359 aaPredicted RBP6.52□□□□□ -1.36
CDC42SE1-201ENST00000357235 COL27A1Q8IZC6 1860 aaPredicted RBP6.52□□□□□ -1.37
CDC42SE1-201ENST00000357235 BSPH1Q075Z2 132 aa6.52□□□□□ -1.37
CDC42SE1-201ENST00000357235 Q6AWC8 147 aa6.52□□□□□ -1.37
CDC42SE1-201ENST00000357235 FAM169BQ8N8A8 192 aa6.52□□□□□ -1.37
CDC42SE1-201ENST00000357235 PRELID3AQ96N28 172 aa6.52□□□□□ -1.37
CDC42SE1-201ENST00000357235 CTSZQ9UBR2 303 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms